RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
CTNND1-204ENST00000361796 SUPT5HO00267 1087 aaKnown RBP13.34□□□□□ -0.27
CTNND1-204ENST00000361796 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
CTNND1-204ENST00000361796 SHROOM4Q9ULL8 1493 aa13.12□□□□□ -0.31
CTNND1-204ENST00000361796 TTBK1Q5TCY1 1321 aaPredicted RBP12.82□□□□□ -0.36
CTNND1-204ENST00000361796 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
CTNND1-204ENST00000361796 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
CTNND1-204ENST00000361796 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
CTNND1-204ENST00000361796 APLP2Q06481 763 aa12.62□□□□□ -0.39
CTNND1-204ENST00000361796 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
CTNND1-204ENST00000361796 RANGAP1P46060 587 aaPredicted RBP12.58□□□□□ -0.4
CTNND1-204ENST00000361796 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
CTNND1-204ENST00000361796 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-204ENST00000361796 CCER1Q8TC90 406 aaPredicted RBP12.33□□□□□ -0.44
CTNND1-204ENST00000361796 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
CTNND1-204ENST00000361796 CENPBP07199 599 aaPredicted RBP12.28□□□□□ -0.44
CTNND1-204ENST00000361796 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
CTNND1-204ENST00000361796 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
CTNND1-204ENST00000361796 UBTFP17480 764 aaKnown RBP12.15□□□□□ -0.46
CTNND1-204ENST00000361796 ZEB1P37275 1124 aaPredicted RBP12.11□□□□□ -0.47
CTNND1-204ENST00000361796 NEFLP07196 543 aa12.08□□□□□ -0.48
CTNND1-204ENST00000361796 MYT1LQ9UL68 1186 aa12.05□□□□□ -0.48
CTNND1-204ENST00000361796 MYT1Q01538 1121 aa12.03□□□□□ -0.48
CTNND1-204ENST00000361796 CHIC1Q5VXU3 224 aa11.99□□□□□ -0.49
CTNND1-204ENST00000361796 CNGB1Q14028 1251 aaPredicted RBP11.98□□□□□ -0.49
CTNND1-204ENST00000361796 POLR3GLQ9BT43 218 aa11.98□□□□□ -0.49
CTNND1-204ENST00000361796 ITGAEP38570 1179 aa11.97□□□□□ -0.49
CTNND1-204ENST00000361796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.82□□□□□ -0.52
CTNND1-204ENST00000361796 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
CTNND1-204ENST00000361796 LOC105371045A0A1W2PR82 267 aa11.82□□□□□ -0.52
CTNND1-204ENST00000361796 TRIM26Q12899 539 aaPredicted RBP11.82□□□□□ -0.52
CTNND1-204ENST00000361796 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
CTNND1-204ENST00000361796 HRCP23327 699 aa11.8□□□□□ -0.52
CTNND1-204ENST00000361796 SLC4A1APQ9BWU0 796 aaKnown RBP11.72□□□□□ -0.53
CTNND1-204ENST00000361796 BCANQ96GW7 911 aa11.6□□□□□ -0.55
CTNND1-204ENST00000361796 CLSPNQ9HAW4 1339 aa11.58□□□□□ -0.56
CTNND1-204ENST00000361796 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
CTNND1-204ENST00000361796 DIEXFQ68CQ4 756 aaKnown RBP11.56□□□□□ -0.56
CTNND1-204ENST00000361796 FAM50AQ14320 339 aaKnown RBP11.54□□□□□ -0.56
CTNND1-204ENST00000361796 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
CTNND1-204ENST00000361796 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
CTNND1-204ENST00000361796 BCL11AQ9H165 835 aa11.49□□□□□ -0.57
CTNND1-204ENST00000361796 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
CTNND1-204ENST00000361796 PLPPR3Q6T4P5 718 aa11.48□□□□□ -0.57
CTNND1-204ENST00000361796 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.58
CTNND1-204ENST00000361796 GTF3C3Q9Y5Q9 886 aa11.43□□□□□ -0.58
CTNND1-204ENST00000361796 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
CTNND1-204ENST00000361796 PABPN1Q86U42 306 aaKnown RBP eCLIP11.34□□□□□ -0.594e-7■□□□□ 8.4
CTNND1-204ENST00000361796 ARID3CA6NKF2 412 aa11.33□□□□□ -0.6
CTNND1-204ENST00000361796 ANP32CO43423 234 aa11.31□□□□□ -0.6
CTNND1-204ENST00000361796 CDK11AQ9UQ88 783 aaPredicted RBP11.29□□□□□ -0.6
CTNND1-204ENST00000361796 FBLN2P98095 1184 aa11.27□□□□□ -0.6
CTNND1-204ENST00000361796 CANXP27824 592 aaKnown RBP11.27□□□□□ -0.61
CTNND1-204ENST00000361796 P3H3Q8IVL6 736 aa11.25□□□□□ -0.61
CTNND1-204ENST00000361796 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
CTNND1-204ENST00000361796 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
CTNND1-204ENST00000361796 A0A0G2JS52 829 aa11.18□□□□□ -0.62
CTNND1-204ENST00000361796 ABCC9O60706 1549 aa11.18□□□□□ -0.62
CTNND1-204ENST00000361796 ZNF777Q9ULD5 760 aaPredicted RBP11.15□□□□□ -0.62
CTNND1-204ENST00000361796 ACIN1Q9UKV3 1341 aaKnown RBP11.13□□□□□ -0.63
CTNND1-204ENST00000361796 ANP32AP39687 249 aaKnown RBP11.11□□□□□ -0.63
CTNND1-204ENST00000361796 SALL2Q9Y467 1007 aaPredicted RBP11.1□□□□□ -0.63
CTNND1-204ENST00000361796 SCAF1Q9H7N4 1312 aaKnown RBP11.1□□□□□ -0.63
CTNND1-204ENST00000361796 FKBP8Q14318 412 aa11.1□□□□□ -0.63
CTNND1-204ENST00000361796 ESF1Q9H501 851 aaKnown RBP11.08□□□□□ -0.63
CTNND1-204ENST00000361796 EIF5BO60841 1220 aaKnown RBP11.07□□□□□ -0.64
CTNND1-204ENST00000361796 NEFMP07197 916 aa11.07□□□□□ -0.64
CTNND1-204ENST00000361796 ARXQ96QS3 562 aa11.05□□□□□ -0.64
CTNND1-204ENST00000361796 FAM9BQ8IZU0 186 aa11.04□□□□□ -0.64
CTNND1-204ENST00000361796 CHGAP10645 457 aaKnown RBP11.03□□□□□ -0.64
CTNND1-204ENST00000361796 NBR1Q14596 966 aa11.02□□□□□ -0.65
CTNND1-204ENST00000361796 HNRNPUQ00839 825 aaKnown RBP eCLIP11.01□□□□□ -0.65
CTNND1-204ENST00000361796 PLEKHG5O94827 1062 aa11□□□□□ -0.65
CTNND1-204ENST00000361796 DDX10Q13206 875 aaKnown RBP11□□□□□ -0.65
CTNND1-204ENST00000361796 HSP90AA1P07900 732 aaKnown RBP10.99□□□□□ -0.65
CTNND1-204ENST00000361796 SENP3Q9H4L4 574 aaPredicted RBP10.99□□□□□ -0.65
CTNND1-204ENST00000361796 IRX6P78412 446 aaPredicted RBP10.98□□□□□ -0.65
CTNND1-204ENST00000361796 CHIC2Q9UKJ5 165 aa10.95□□□□□ -0.66
CTNND1-204ENST00000361796 HIRIP3Q9BW71 556 aaPredicted RBP10.95□□□□□ -0.66
CTNND1-204ENST00000361796 CSRNP3Q8WYN3 585 aa10.95□□□□□ -0.66
CTNND1-204ENST00000361796 TONSLQ96HA7 1378 aa10.94□□□□□ -0.66
CTNND1-204ENST00000361796 STAG3Q9UJ98 1225 aa10.93□□□□□ -0.66
CTNND1-204ENST00000361796 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
CTNND1-204ENST00000361796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.661e-8■■□□□ 13.5
CTNND1-204ENST00000361796 ANP32BQ92688 251 aaKnown RBP10.92□□□□□ -0.66
CTNND1-204ENST00000361796 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
CTNND1-204ENST00000361796 UPF2Q9HAU5 1272 aaKnown RBP10.88□□□□□ -0.67
CTNND1-204ENST00000361796 CCDC136Q96JN2 1154 aa10.88□□□□□ -0.67
CTNND1-204ENST00000361796 TMC1Q8TDI8 760 aa10.85□□□□□ -0.67
CTNND1-204ENST00000361796 ZBTB7CA1YPR0 619 aa10.85□□□□□ -0.67
CTNND1-204ENST00000361796 MIER1Q8N108 512 aa10.82□□□□□ -0.68
CTNND1-204ENST00000361796 MRS2Q9HD23 443 aa10.82□□□□□ -0.68
CTNND1-204ENST00000361796 SCRIBQ14160 1630 aa10.82□□□□□ -0.68
CTNND1-204ENST00000361796 WDR43Q15061 677 aaKnown RBP eCLIP10.82□□□□□ -0.683e-9■■■□□ 15.6
CTNND1-204ENST00000361796 HAP1P54257 671 aaPredicted RBP10.79□□□□□ -0.68
CTNND1-204ENST00000361796 TPRNQ4KMQ1 711 aa10.78□□□□□ -0.68
CTNND1-204ENST00000361796 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.77□□□□□ -0.68
CTNND1-204ENST00000361796 TULP1O00294 542 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-204ENST00000361796 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
CTNND1-204ENST00000361796 C14orf37Q86TY3 774 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms