RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 DCAF8L2P0C7V8 631 aa15.79■□□□□ 0.12
CTNND1-213ENST00000526357 PELP1Q8IZL8 1130 aaKnown RBP15.4■□□□□ 0.06
CTNND1-213ENST00000526357 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
CTNND1-213ENST00000526357 APLP2Q06481 763 aa14.76□□□□□ -0.05
CTNND1-213ENST00000526357 ERICH6Q7L0X2 663 aa14.75□□□□□ -0.05
CTNND1-213ENST00000526357 CCER1Q8TC90 406 aaPredicted RBP14.7□□□□□ -0.06
CTNND1-213ENST00000526357 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
CTNND1-213ENST00000526357 FAM9AQ8IZU1 332 aaPredicted RBP14.66□□□□□ -0.06
CTNND1-213ENST00000526357 CENPBP07199 599 aaPredicted RBP14.45□□□□□ -0.1
CTNND1-213ENST00000526357 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
CTNND1-213ENST00000526357 MYT1Q01538 1121 aa14.33□□□□□ -0.12
CTNND1-213ENST00000526357 NISCHQ9Y2I1 1504 aa14.3□□□□□ -0.12
CTNND1-213ENST00000526357 NEFLP07196 543 aa14.26□□□□□ -0.13
CTNND1-213ENST00000526357 ZEB1P37275 1124 aaPredicted RBP14.25□□□□□ -0.13
CTNND1-213ENST00000526357 TTBK1Q5TCY1 1321 aaPredicted RBP14.24□□□□□ -0.13
CTNND1-213ENST00000526357 PCGF6Q9BYE7 350 aa14.22□□□□□ -0.13
CTNND1-213ENST00000526357 ATP1B4Q9UN42 357 aaPredicted RBP14.09□□□□□ -0.15
CTNND1-213ENST00000526357 DAXXQ9UER7 740 aaPredicted RBP14.06□□□□□ -0.16
CTNND1-213ENST00000526357 RANGAP1P46060 587 aaPredicted RBP14.05□□□□□ -0.16
CTNND1-213ENST00000526357 YTHDC1Q96MU7 727 aaKnown RBP13.97□□□□□ -0.17
CTNND1-213ENST00000526357 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
CTNND1-213ENST00000526357 UBTFP17480 764 aaKnown RBP13.85□□□□□ -0.19
CTNND1-213ENST00000526357 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
CTNND1-213ENST00000526357 POLR3GLQ9BT43 218 aa13.68□□□□□ -0.22
CTNND1-213ENST00000526357 ZNF316A6NFI3 1004 aaPredicted RBP13.68□□□□□ -0.22
CTNND1-213ENST00000526357 RTL5Q5HYW3 569 aaPredicted RBP13.65□□□□□ -0.22
CTNND1-213ENST00000526357 CLSPNQ9HAW4 1339 aa13.58□□□□□ -0.24
CTNND1-213ENST00000526357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.54□□□□□ -0.24
CTNND1-213ENST00000526357 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
CTNND1-213ENST00000526357 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.24
CTNND1-213ENST00000526357 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
CTNND1-213ENST00000526357 ITGAEP38570 1179 aa13.48□□□□□ -0.25
CTNND1-213ENST00000526357 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
CTNND1-213ENST00000526357 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.26
CTNND1-213ENST00000526357 HRCP23327 699 aa13.41□□□□□ -0.26
CTNND1-213ENST00000526357 CHIC1Q5VXU3 224 aa13.4□□□□□ -0.26
CTNND1-213ENST00000526357 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
CTNND1-213ENST00000526357 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
CTNND1-213ENST00000526357 DIEXFQ68CQ4 756 aaKnown RBP13.19□□□□□ -0.3
CTNND1-213ENST00000526357 CANXP27824 592 aaKnown RBP13.16□□□□□ -0.3
CTNND1-213ENST00000526357 TRIM52Q96A61 297 aa13.16□□□□□ -0.3
CTNND1-213ENST00000526357 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
CTNND1-213ENST00000526357 NEFMP07197 916 aa13.12□□□□□ -0.31
CTNND1-213ENST00000526357 FAM50AQ14320 339 aaKnown RBP13.11□□□□□ -0.31
CTNND1-213ENST00000526357 ANP32CO43423 234 aa13.11□□□□□ -0.31
CTNND1-213ENST00000526357 BCANQ96GW7 911 aa13.1□□□□□ -0.31
CTNND1-213ENST00000526357 ANP32BQ92688 251 aaKnown RBP13.08□□□□□ -0.32
CTNND1-213ENST00000526357 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
CTNND1-213ENST00000526357 BCL11AQ9H165 835 aa13.05□□□□□ -0.32
CTNND1-213ENST00000526357 ANP32AP39687 249 aaKnown RBP13.04□□□□□ -0.32
CTNND1-213ENST00000526357 ZNF326Q5BKZ1 582 aaKnown RBP13.01□□□□□ -0.33
CTNND1-213ENST00000526357 LOC105371045A0A1W2PR82 267 aa12.99□□□□□ -0.33
CTNND1-213ENST00000526357 GLIPR1L2Q4G1C9 344 aa12.97□□□□□ -0.33
CTNND1-213ENST00000526357 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.33
CTNND1-213ENST00000526357 EIF5BO60841 1220 aaKnown RBP12.93□□□□□ -0.34
CTNND1-213ENST00000526357 HSP90AA1P07900 732 aaKnown RBP12.92□□□□□ -0.34
CTNND1-213ENST00000526357 NPM2Q86SE8 214 aaKnown RBP12.9□□□□□ -0.34
CTNND1-213ENST00000526357 UPF2Q9HAU5 1272 aaKnown RBP12.88□□□□□ -0.35
CTNND1-213ENST00000526357 CDK11BP21127 795 aaKnown RBP12.82□□□□□ -0.36
CTNND1-213ENST00000526357 ESF1Q9H501 851 aaKnown RBP12.73□□□□□ -0.37
CTNND1-213ENST00000526357 FBLN2P98095 1184 aa12.72□□□□□ -0.37
CTNND1-213ENST00000526357 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
CTNND1-213ENST00000526357 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.68□□□□□ -0.38
CTNND1-213ENST00000526357 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
CTNND1-213ENST00000526357 FKBP8Q14318 412 aa12.66□□□□□ -0.38
CTNND1-213ENST00000526357 ZNF777Q9ULD5 760 aaPredicted RBP12.63□□□□□ -0.39
CTNND1-213ENST00000526357 CHGAP10645 457 aaKnown RBP12.6□□□□□ -0.39
CTNND1-213ENST00000526357 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
CTNND1-213ENST00000526357 MYH16Q9H6N6 1097 aa12.6□□□□□ -0.39
CTNND1-213ENST00000526357 ARXQ96QS3 562 aa12.59□□□□□ -0.39
CTNND1-213ENST00000526357 CCDC136Q96JN2 1154 aa12.58□□□□□ -0.4
CTNND1-213ENST00000526357 HNRNPUQ00839 825 aaKnown RBP eCLIP12.58□□□□□ -0.4
CTNND1-213ENST00000526357 NBR1Q14596 966 aa12.58□□□□□ -0.4
CTNND1-213ENST00000526357 TNNT2P45379 298 aaPredicted RBP12.58□□□□□ -0.4
CTNND1-213ENST00000526357 TONSLQ96HA7 1378 aa12.57□□□□□ -0.4
CTNND1-213ENST00000526357 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.43e-9■■■□□ 15.6
CTNND1-213ENST00000526357 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
CTNND1-213ENST00000526357 ANP32EQ9BTT0 268 aa12.56□□□□□ -0.4
CTNND1-213ENST00000526357 ARID3CA6NKF2 412 aa12.55□□□□□ -0.4
CTNND1-213ENST00000526357 TRIM44Q96DX7 344 aaPredicted RBP12.55□□□□□ -0.4
CTNND1-213ENST00000526357 P3H3Q8IVL6 736 aa12.53□□□□□ -0.4
CTNND1-213ENST00000526357 BECN1Q14457 450 aa12.52□□□□□ -0.4
CTNND1-213ENST00000526357 TMC1Q8TDI8 760 aa12.52□□□□□ -0.41
CTNND1-213ENST00000526357 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
CTNND1-213ENST00000526357 GOLGA6L22H0YM25 854 aa12.52□□□□□ -0.41
CTNND1-213ENST00000526357 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
CTNND1-213ENST00000526357 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
CTNND1-213ENST00000526357 PLPPR3Q6T4P5 718 aa12.49□□□□□ -0.41
CTNND1-213ENST00000526357 SCAF1Q9H7N4 1312 aaKnown RBP12.47□□□□□ -0.41
CTNND1-213ENST00000526357 NPM1P06748 294 aaKnown RBP eCLIP12.45□□□□□ -0.42
CTNND1-213ENST00000526357 PTMAP06454 111 aaKnown RBP12.45□□□□□ -0.42
CTNND1-213ENST00000526357 A0A0G2JS52 829 aa12.44□□□□□ -0.42
CTNND1-213ENST00000526357 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.424e-7■□□□□ 8.4
CTNND1-213ENST00000526357 DDX10Q13206 875 aaKnown RBP12.43□□□□□ -0.42
CTNND1-213ENST00000526357 CASC1Q6TDU7 716 aa12.42□□□□□ -0.42
CTNND1-213ENST00000526357 DNTTIP2Q5QJE6 756 aaKnown RBP12.41□□□□□ -0.42
CTNND1-213ENST00000526357 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
CTNND1-213ENST00000526357 GOLGA6L6A8MZA4 724 aa12.38□□□□□ -0.43
CTNND1-213ENST00000526357 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
CTNND1-213ENST00000526357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.37□□□□□ -0.431e-8■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms