RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 DCAF8L2P0C7V8 631 aa14.61□□□□□ -0.07
CTNND1-219ENST00000528621 NISCHQ9Y2I1 1504 aa14.24□□□□□ -0.13
CTNND1-219ENST00000528621 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
CTNND1-219ENST00000528621 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
CTNND1-219ENST00000528621 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
CTNND1-219ENST00000528621 PELP1Q8IZL8 1130 aaKnown RBP13.4□□□□□ -0.26
CTNND1-219ENST00000528621 APLP2Q06481 763 aa13.34□□□□□ -0.27
CTNND1-219ENST00000528621 FAM9AQ8IZU1 332 aaPredicted RBP13.27□□□□□ -0.29
CTNND1-219ENST00000528621 ZEB1P37275 1124 aaPredicted RBP13□□□□□ -0.33
CTNND1-219ENST00000528621 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
CTNND1-219ENST00000528621 PCGF6Q9BYE7 350 aa12.91□□□□□ -0.34
CTNND1-219ENST00000528621 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
CTNND1-219ENST00000528621 RANGAP1P46060 587 aaPredicted RBP12.88□□□□□ -0.35
CTNND1-219ENST00000528621 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.35
CTNND1-219ENST00000528621 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.35
CTNND1-219ENST00000528621 CCER1Q8TC90 406 aaPredicted RBP12.8□□□□□ -0.36
CTNND1-219ENST00000528621 ERICH6Q7L0X2 663 aa12.79□□□□□ -0.36
CTNND1-219ENST00000528621 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
CTNND1-219ENST00000528621 NEFLP07196 543 aa12.59□□□□□ -0.39
CTNND1-219ENST00000528621 TRIM26Q12899 539 aaPredicted RBP12.5□□□□□ -0.41
CTNND1-219ENST00000528621 YTHDC1Q96MU7 727 aaKnown RBP12.5□□□□□ -0.41
CTNND1-219ENST00000528621 MYT1Q01538 1121 aa12.48□□□□□ -0.41
CTNND1-219ENST00000528621 PPARGC1BQ86YN6 1023 aaKnown RBP12.44□□□□□ -0.42
CTNND1-219ENST00000528621 MYT1LQ9UL68 1186 aa12.39□□□□□ -0.43
CTNND1-219ENST00000528621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-219ENST00000528621 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
CTNND1-219ENST00000528621 ITGAEP38570 1179 aa12.33□□□□□ -0.44
CTNND1-219ENST00000528621 POLR3GLQ9BT43 218 aa12.29□□□□□ -0.44
CTNND1-219ENST00000528621 DAXXQ9UER7 740 aaPredicted RBP12.26□□□□□ -0.45
CTNND1-219ENST00000528621 HRCP23327 699 aa12.25□□□□□ -0.45
CTNND1-219ENST00000528621 CHIC1Q5VXU3 224 aa12.25□□□□□ -0.45
CTNND1-219ENST00000528621 LOC105371045A0A1W2PR82 267 aa12.21□□□□□ -0.46
CTNND1-219ENST00000528621 ABCC9O60706 1549 aa12.12□□□□□ -0.47
CTNND1-219ENST00000528621 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
CTNND1-219ENST00000528621 FAM50AQ14320 339 aaKnown RBP12.09□□□□□ -0.47
CTNND1-219ENST00000528621 CNGB1Q14028 1251 aaPredicted RBP12.08□□□□□ -0.48
CTNND1-219ENST00000528621 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.484e-7■□□□□ 8.4
CTNND1-219ENST00000528621 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
CTNND1-219ENST00000528621 DIEXFQ68CQ4 756 aaKnown RBP12□□□□□ -0.49
CTNND1-219ENST00000528621 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
CTNND1-219ENST00000528621 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.5
CTNND1-219ENST00000528621 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
CTNND1-219ENST00000528621 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
CTNND1-219ENST00000528621 CCDC180Q9P1Z9 1646 aa11.89□□□□□ -0.51
CTNND1-219ENST00000528621 ANP32CO43423 234 aa11.88□□□□□ -0.51
CTNND1-219ENST00000528621 FBLN2P98095 1184 aa11.85□□□□□ -0.51
CTNND1-219ENST00000528621 ZNF326Q5BKZ1 582 aaKnown RBP11.85□□□□□ -0.51
CTNND1-219ENST00000528621 ZCCHC6Q5VYS8 1495 aaKnown RBP11.82□□□□□ -0.52
CTNND1-219ENST00000528621 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
CTNND1-219ENST00000528621 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
CTNND1-219ENST00000528621 CSRNP3Q8WYN3 585 aa11.78□□□□□ -0.52
CTNND1-219ENST00000528621 CDK11AQ9UQ88 783 aaPredicted RBP11.77□□□□□ -0.53
CTNND1-219ENST00000528621 CANXP27824 592 aaKnown RBP11.76□□□□□ -0.53
CTNND1-219ENST00000528621 BCANQ96GW7 911 aa11.75□□□□□ -0.53
CTNND1-219ENST00000528621 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
CTNND1-219ENST00000528621 NEFMP07197 916 aa11.73□□□□□ -0.53
CTNND1-219ENST00000528621 GTF3C3Q9Y5Q9 886 aa11.7□□□□□ -0.54
CTNND1-219ENST00000528621 ARID3CA6NKF2 412 aa11.69□□□□□ -0.54
CTNND1-219ENST00000528621 DCAF1Q9Y4B6 1507 aa11.69□□□□□ -0.54
CTNND1-219ENST00000528621 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
CTNND1-219ENST00000528621 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
CTNND1-219ENST00000528621 RB1CC1Q8TDY2 1594 aa11.63□□□□□ -0.55
CTNND1-219ENST00000528621 TONSLQ96HA7 1378 aa11.6□□□□□ -0.55
CTNND1-219ENST00000528621 ESF1Q9H501 851 aaKnown RBP11.59□□□□□ -0.55
CTNND1-219ENST00000528621 ACIN1Q9UKV3 1341 aaKnown RBP11.57□□□□□ -0.56
CTNND1-219ENST00000528621 ANP32AP39687 249 aaKnown RBP11.57□□□□□ -0.56
CTNND1-219ENST00000528621 BCL11AQ9H165 835 aa11.57□□□□□ -0.56
CTNND1-219ENST00000528621 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
CTNND1-219ENST00000528621 EEA1Q15075 1411 aa11.53□□□□□ -0.56
CTNND1-219ENST00000528621 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
CTNND1-219ENST00000528621 CHGAP10645 457 aaKnown RBP11.52□□□□□ -0.57
CTNND1-219ENST00000528621 NACADO15069 1562 aa11.51□□□□□ -0.57
CTNND1-219ENST00000528621 NPM2Q86SE8 214 aaKnown RBP11.48□□□□□ -0.57
CTNND1-219ENST00000528621 RSF1Q96T23 1441 aaPredicted RBP11.46□□□□□ -0.57
CTNND1-219ENST00000528621 GOLGA3Q08378 1498 aa11.45□□□□□ -0.58
CTNND1-219ENST00000528621 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.45□□□□□ -0.58
CTNND1-219ENST00000528621 FKBP8Q14318 412 aa11.44□□□□□ -0.58
CTNND1-219ENST00000528621 UPF2Q9HAU5 1272 aaKnown RBP11.44□□□□□ -0.58
CTNND1-219ENST00000528621 MTUS2Q5JR59 1369 aa11.43□□□□□ -0.58
CTNND1-219ENST00000528621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.581e-8■■□□□ 13.5
CTNND1-219ENST00000528621 CLIP1P30622 1438 aa11.43□□□□□ -0.58
CTNND1-219ENST00000528621 CHIC2Q9UKJ5 165 aa11.42□□□□□ -0.58
CTNND1-219ENST00000528621 HNRNPUQ00839 825 aaKnown RBP eCLIP11.42□□□□□ -0.58
CTNND1-219ENST00000528621 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
CTNND1-219ENST00000528621 ANP32BQ92688 251 aaKnown RBP11.42□□□□□ -0.58
CTNND1-219ENST00000528621 TSPY4P0CV99 314 aa11.41□□□□□ -0.58
CTNND1-219ENST00000528621 TSPY10P0CW01 314 aa11.41□□□□□ -0.58
CTNND1-219ENST00000528621 PLPPR3Q6T4P5 718 aa11.41□□□□□ -0.58
CTNND1-219ENST00000528621 HSP90AA1P07900 732 aaKnown RBP11.4□□□□□ -0.58
CTNND1-219ENST00000528621 WDR43Q15061 677 aaKnown RBP eCLIP11.4□□□□□ -0.583e-9■■■□□ 15.6
CTNND1-219ENST00000528621 DDX10Q13206 875 aaKnown RBP11.39□□□□□ -0.59
CTNND1-219ENST00000528621 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
CTNND1-219ENST00000528621 TMC1Q8TDI8 760 aa11.37□□□□□ -0.59
CTNND1-219ENST00000528621 BAZ1BQ9UIG0 1483 aaKnown RBP11.37□□□□□ -0.59
CTNND1-219ENST00000528621 KDM2AQ9Y2K7 1162 aa11.34□□□□□ -0.59
CTNND1-219ENST00000528621 CEP164Q9UPV0 1460 aa11.34□□□□□ -0.59
CTNND1-219ENST00000528621 SCAF1Q9H7N4 1312 aaKnown RBP11.33□□□□□ -0.6
CTNND1-219ENST00000528621 SALL2Q9Y467 1007 aaPredicted RBP11.32□□□□□ -0.6
CTNND1-219ENST00000528621 WRNQ14191 1432 aaPredicted RBP eCLIP11.32□□□□□ -0.6
CTNND1-219ENST00000528621 KIF27Q86VH2 1401 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms