RNA–Protein interactions for RNA: ENST00000409476.5

MDH1-202, Transcript of malate dehydrogenase 1, humanhuman

TSL 5 BASIC

Gene MDH1, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-202ENST00000409476 AEBP2Q6ZN18 517 aaPredicted RBP28.2■■■□□ 2.1
MDH1-202ENST00000409476 CHIC1Q5VXU3 224 aa26.48■■□□□ 1.83
MDH1-202ENST00000409476 NISCHQ9Y2I1 1504 aa25.7■■□□□ 1.7
MDH1-202ENST00000409476 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
MDH1-202ENST00000409476 PHF23Q9BUL5 403 aaPredicted RBP23.82■■□□□ 1.4
MDH1-202ENST00000409476 CCDC180Q9P1Z9 1646 aa22.62■■□□□ 1.21
MDH1-202ENST00000409476 FOXD1Q16676 465 aa22.61■■□□□ 1.21
MDH1-202ENST00000409476 ABCC9O60706 1549 aa22.38■■□□□ 1.17
MDH1-202ENST00000409476 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
MDH1-202ENST00000409476 POTEDQ86YR6 584 aa21.84■■□□□ 1.09
MDH1-202ENST00000409476 MSH5O43196 834 aa21.47■■□□□ 1.03
MDH1-202ENST00000409476 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
MDH1-202ENST00000409476 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
MDH1-202ENST00000409476 NACADO15069 1562 aa21.31■■□□□ 1
MDH1-202ENST00000409476 PABPN1Q86U42 306 aaKnown RBP eCLIP21.1■□□□□ 0.97
MDH1-202ENST00000409476 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
MDH1-202ENST00000409476 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.96
MDH1-202ENST00000409476 PIAS4Q8N2W9 510 aaPredicted RBP21.03■□□□□ 0.96
MDH1-202ENST00000409476 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
MDH1-202ENST00000409476 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
MDH1-202ENST00000409476 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
MDH1-202ENST00000409476 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
MDH1-202ENST00000409476 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
MDH1-202ENST00000409476 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
MDH1-202ENST00000409476 DNAJC5BQ9UF47 199 aa20.59■□□□□ 0.89
MDH1-202ENST00000409476 ADRA2BP18089 450 aa20.58■□□□□ 0.89
MDH1-202ENST00000409476 EIF4G1Q04637 1599 aaKnown RBP20.19■□□□□ 0.82
MDH1-202ENST00000409476 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
MDH1-202ENST00000409476 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
MDH1-202ENST00000409476 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
MDH1-202ENST00000409476 SMARCA4P51532 1647 aa19.9■□□□□ 0.78
MDH1-202ENST00000409476 BAZ1AQ9NRL2 1556 aaPredicted RBP19.85■□□□□ 0.77
MDH1-202ENST00000409476 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
MDH1-202ENST00000409476 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
MDH1-202ENST00000409476 WIZO95785 1651 aa19.71■□□□□ 0.75
MDH1-202ENST00000409476 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
MDH1-202ENST00000409476 RSF1Q96T23 1441 aaPredicted RBP19.69■□□□□ 0.74
MDH1-202ENST00000409476 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
MDH1-202ENST00000409476 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
MDH1-202ENST00000409476 PEG3Q9GZU2 1588 aa19.57■□□□□ 0.72
MDH1-202ENST00000409476 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
MDH1-202ENST00000409476 NESP48681 1621 aa19.4■□□□□ 0.7
MDH1-202ENST00000409476 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
MDH1-202ENST00000409476 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
MDH1-202ENST00000409476 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
MDH1-202ENST00000409476 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
MDH1-202ENST00000409476 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
MDH1-202ENST00000409476 DMRT2Q9Y5R5 561 aa19.12■□□□□ 0.65
MDH1-202ENST00000409476 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
MDH1-202ENST00000409476 CFTRP13569 1480 aa19.07■□□□□ 0.64
MDH1-202ENST00000409476 KIF21AQ7Z4S6 1674 aa19.07■□□□□ 0.64
MDH1-202ENST00000409476 MAPK8IP2Q13387 824 aaPredicted RBP19.06■□□□□ 0.64
MDH1-202ENST00000409476 FANCD2Q9BXW9 1451 aa19.01■□□□□ 0.63
MDH1-202ENST00000409476 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
MDH1-202ENST00000409476 CEP164Q9UPV0 1460 aa18.93■□□□□ 0.62
MDH1-202ENST00000409476 THOC2Q8NI27 1593 aaKnown RBP18.87■□□□□ 0.61
MDH1-202ENST00000409476 MRC2Q9UBG0 1479 aa18.87■□□□□ 0.61
MDH1-202ENST00000409476 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
MDH1-202ENST00000409476 URB2Q14146 1524 aaKnown RBP18.81■□□□□ 0.6
MDH1-202ENST00000409476 CUX2O14529 1486 aa18.8■□□□□ 0.6
MDH1-202ENST00000409476 CACNB1Q02641 598 aaPredicted RBP18.75■□□□□ 0.59
MDH1-202ENST00000409476 WDR62O43379 1518 aa18.74■□□□□ 0.59
MDH1-202ENST00000409476 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
MDH1-202ENST00000409476 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
MDH1-202ENST00000409476 CUX1P39880 1505 aa18.62■□□□□ 0.57
MDH1-202ENST00000409476 DNMBPQ6XZF7 1577 aa18.62■□□□□ 0.57
MDH1-202ENST00000409476 RAD54L2Q9Y4B4 1467 aa18.6■□□□□ 0.57
MDH1-202ENST00000409476 SOGA1O94964 1423 aa18.57■□□□□ 0.56
MDH1-202ENST00000409476 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
MDH1-202ENST00000409476 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
MDH1-202ENST00000409476 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
MDH1-202ENST00000409476 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
MDH1-202ENST00000409476 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
MDH1-202ENST00000409476 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.556e-7■■■■□ 21.6
MDH1-202ENST00000409476 IFT140Q96RY7 1462 aa18.52■□□□□ 0.55
MDH1-202ENST00000409476 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
MDH1-202ENST00000409476 TARBP1Q13395 1621 aaKnown RBP18.45■□□□□ 0.54
MDH1-202ENST00000409476 FBLN2P98095 1184 aa18.43■□□□□ 0.54
MDH1-202ENST00000409476 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
MDH1-202ENST00000409476 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
MDH1-202ENST00000409476 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
MDH1-202ENST00000409476 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
MDH1-202ENST00000409476 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
MDH1-202ENST00000409476 DNAJC5Q9H3Z4 198 aa18.33■□□□□ 0.52
MDH1-202ENST00000409476 OSCARQ8IYS5 282 aa18.3■□□□□ 0.52
MDH1-202ENST00000409476 GAPVD1Q14C86 1478 aa18.3■□□□□ 0.52
MDH1-202ENST00000409476 ABCA10Q8WWZ4 1543 aa18.29■□□□□ 0.52
MDH1-202ENST00000409476 CHMP7Q8WUX9 453 aaPredicted RBP18.28■□□□□ 0.52
MDH1-202ENST00000409476 WDR97A6NE52 1622 aa18.25■□□□□ 0.51
MDH1-202ENST00000409476 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
MDH1-202ENST00000409476 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
MDH1-202ENST00000409476 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
MDH1-202ENST00000409476 RNF39Q9H2S5 420 aa18.21■□□□□ 0.51
MDH1-202ENST00000409476 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
MDH1-202ENST00000409476 HOXD11P31277 338 aaPredicted RBP18.19■□□□□ 0.5
MDH1-202ENST00000409476 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
MDH1-202ENST00000409476 ABCA5Q8WWZ7 1642 aa18.17■□□□□ 0.5
MDH1-202ENST00000409476 CHD1O14646 1710 aa18.16■□□□□ 0.5
MDH1-202ENST00000409476 KIF27Q86VH2 1401 aa18.15■□□□□ 0.5
MDH1-202ENST00000409476 IGF1RP08069 1367 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms