RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
CTNND1-233ENST00000532787 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
CTNND1-233ENST00000532787 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
CTNND1-233ENST00000532787 NISCHQ9Y2I1 1504 aa12.02□□□□□ -0.49
CTNND1-233ENST00000532787 MYT1Q01538 1121 aa11.92□□□□□ -0.5
CTNND1-233ENST00000532787 APLP2Q06481 763 aa11.84□□□□□ -0.51
CTNND1-233ENST00000532787 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
CTNND1-233ENST00000532787 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
CTNND1-233ENST00000532787 ZEB1P37275 1124 aaPredicted RBP11.71□□□□□ -0.53
CTNND1-233ENST00000532787 FAM9AQ8IZU1 332 aaPredicted RBP11.71□□□□□ -0.54
CTNND1-233ENST00000532787 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
CTNND1-233ENST00000532787 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
CTNND1-233ENST00000532787 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
CTNND1-233ENST00000532787 PCGF6Q9BYE7 350 aa11.48□□□□□ -0.57
CTNND1-233ENST00000532787 NEFLP07196 543 aa11.42□□□□□ -0.58
CTNND1-233ENST00000532787 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
CTNND1-233ENST00000532787 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
CTNND1-233ENST00000532787 UBTFP17480 764 aaKnown RBP11.18□□□□□ -0.62
CTNND1-233ENST00000532787 YTHDC1Q96MU7 727 aaKnown RBP11.16□□□□□ -0.62
CTNND1-233ENST00000532787 TRIM26Q12899 539 aaPredicted RBP11.14□□□□□ -0.63
CTNND1-233ENST00000532787 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
CTNND1-233ENST00000532787 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
CTNND1-233ENST00000532787 RANGAP1P46060 587 aaPredicted RBP11.1□□□□□ -0.63
CTNND1-233ENST00000532787 HRCP23327 699 aa11.03□□□□□ -0.64
CTNND1-233ENST00000532787 RTL5Q5HYW3 569 aaPredicted RBP10.9□□□□□ -0.66
CTNND1-233ENST00000532787 ZNF316A6NFI3 1004 aaPredicted RBP10.84□□□□□ -0.67
CTNND1-233ENST00000532787 POLR3GLQ9BT43 218 aa10.79□□□□□ -0.68
CTNND1-233ENST00000532787 PPARGC1BQ86YN6 1023 aaKnown RBP10.78□□□□□ -0.68
CTNND1-233ENST00000532787 DIEXFQ68CQ4 756 aaKnown RBP10.76□□□□□ -0.69
CTNND1-233ENST00000532787 ITGAEP38570 1179 aa10.75□□□□□ -0.69
CTNND1-233ENST00000532787 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
CTNND1-233ENST00000532787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.75□□□□□ -0.69
CTNND1-233ENST00000532787 HNRNPUL2Q1KMD3 747 aaKnown RBP10.75□□□□□ -0.69
CTNND1-233ENST00000532787 CHIC1Q5VXU3 224 aa10.74□□□□□ -0.69
CTNND1-233ENST00000532787 CLSPNQ9HAW4 1339 aa10.74□□□□□ -0.69
CTNND1-233ENST00000532787 CDK11AQ9UQ88 783 aaPredicted RBP10.66□□□□□ -0.7
CTNND1-233ENST00000532787 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
CTNND1-233ENST00000532787 ANP32CO43423 234 aa10.62□□□□□ -0.71
CTNND1-233ENST00000532787 ZBTB47Q9UFB7 747 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-233ENST00000532787 SLC4A1APQ9BWU0 796 aaKnown RBP10.6□□□□□ -0.71
CTNND1-233ENST00000532787 EIF5BO60841 1220 aaKnown RBP10.59□□□□□ -0.71
CTNND1-233ENST00000532787 GLIPR1L2Q4G1C9 344 aa10.59□□□□□ -0.71
CTNND1-233ENST00000532787 FAM50AQ14320 339 aaKnown RBP10.56□□□□□ -0.72
CTNND1-233ENST00000532787 TRIM52Q96A61 297 aa10.55□□□□□ -0.72
CTNND1-233ENST00000532787 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
CTNND1-233ENST00000532787 CNGB1Q14028 1251 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-233ENST00000532787 ANP32AP39687 249 aaKnown RBP10.51□□□□□ -0.73
CTNND1-233ENST00000532787 NEUROD1Q13562 356 aa10.47□□□□□ -0.73
CTNND1-233ENST00000532787 NEFMP07197 916 aa10.46□□□□□ -0.73
CTNND1-233ENST00000532787 CANXP27824 592 aaKnown RBP10.46□□□□□ -0.73
CTNND1-233ENST00000532787 ACIN1Q9UKV3 1341 aaKnown RBP10.45□□□□□ -0.74
CTNND1-233ENST00000532787 BCANQ96GW7 911 aa10.44□□□□□ -0.74
CTNND1-233ENST00000532787 ANP32BQ92688 251 aaKnown RBP10.43□□□□□ -0.74
CTNND1-233ENST00000532787 ZNF326Q5BKZ1 582 aaKnown RBP10.35□□□□□ -0.75
CTNND1-233ENST00000532787 UPF2Q9HAU5 1272 aaKnown RBP10.35□□□□□ -0.75
CTNND1-233ENST00000532787 DCAF1Q9Y4B6 1507 aa10.28□□□□□ -0.76
CTNND1-233ENST00000532787 CSRNP3Q8WYN3 585 aa10.28□□□□□ -0.76
CTNND1-233ENST00000532787 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-233ENST00000532787 HSP90AA1P07900 732 aaKnown RBP10.27□□□□□ -0.77
CTNND1-233ENST00000532787 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
CTNND1-233ENST00000532787 NPM2Q86SE8 214 aaKnown RBP10.25□□□□□ -0.77
CTNND1-233ENST00000532787 FKBP8Q14318 412 aa10.24□□□□□ -0.77
CTNND1-233ENST00000532787 SLC24A1O60721 1099 aa10.22□□□□□ -0.77
CTNND1-233ENST00000532787 ANP32EQ9BTT0 268 aa10.2□□□□□ -0.78
CTNND1-233ENST00000532787 HNRNPUQ00839 825 aaKnown RBP eCLIP10.19□□□□□ -0.78
CTNND1-233ENST00000532787 CCDC136Q96JN2 1154 aa10.17□□□□□ -0.78
CTNND1-233ENST00000532787 DDRGK1Q96HY6 314 aa10.16□□□□□ -0.78
CTNND1-233ENST00000532787 ABCC9O60706 1549 aa10.14□□□□□ -0.79
CTNND1-233ENST00000532787 PABPN1Q86U42 306 aaKnown RBP eCLIP10.13□□□□□ -0.794e-7■□□□□ 8.4
CTNND1-233ENST00000532787 FBLN2P98095 1184 aa10.13□□□□□ -0.79
CTNND1-233ENST00000532787 TMC1Q8TDI8 760 aa10.13□□□□□ -0.79
CTNND1-233ENST00000532787 BCL11AQ9H165 835 aa10.13□□□□□ -0.79
CTNND1-233ENST00000532787 WDR43Q15061 677 aaKnown RBP eCLIP10.12□□□□□ -0.793e-9■■■□□ 15.6
CTNND1-233ENST00000532787 BECN1Q14457 450 aa10.11□□□□□ -0.79
CTNND1-233ENST00000532787 ZNF777Q9ULD5 760 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-233ENST00000532787 TNNT2P45379 298 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-233ENST00000532787 ESF1Q9H501 851 aaKnown RBP10.11□□□□□ -0.79
CTNND1-233ENST00000532787 FAM9BQ8IZU0 186 aa10.11□□□□□ -0.79
CTNND1-233ENST00000532787 MYH16Q9H6N6 1097 aa10.09□□□□□ -0.79
CTNND1-233ENST00000532787 DDX10Q13206 875 aaKnown RBP10.09□□□□□ -0.79
CTNND1-233ENST00000532787 P3H3Q8IVL6 736 aa10.09□□□□□ -0.79
CTNND1-233ENST00000532787 GOLGA6L22H0YM25 854 aa10.07□□□□□ -0.8
CTNND1-233ENST00000532787 NCLP19338 710 aaKnown RBP10.06□□□□□ -0.8
CTNND1-233ENST00000532787 STAG3Q9UJ98 1225 aa10.06□□□□□ -0.8
CTNND1-233ENST00000532787 MRS2Q9HD23 443 aa10.06□□□□□ -0.8
CTNND1-233ENST00000532787 NBR1Q14596 966 aa10.04□□□□□ -0.8
CTNND1-233ENST00000532787 TRIM44Q96DX7 344 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-233ENST00000532787 CDK11BP21127 795 aaKnown RBP10.04□□□□□ -0.8
CTNND1-233ENST00000532787 PPM1GO15355 546 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-233ENST00000532787 EEA1Q15075 1411 aa10.02□□□□□ -0.81
CTNND1-233ENST00000532787 EIF4G2P78344 907 aaKnown RBP eCLIP10.01□□□□□ -0.81
CTNND1-233ENST00000532787 CHGAP10645 457 aaKnown RBP10.01□□□□□ -0.81
CTNND1-233ENST00000532787 TSPY4P0CV99 314 aa10□□□□□ -0.81
CTNND1-233ENST00000532787 TSPY10P0CW01 314 aa10□□□□□ -0.81
CTNND1-233ENST00000532787 NPM1P06748 294 aaKnown RBP eCLIP10□□□□□ -0.81
CTNND1-233ENST00000532787 RSF1Q96T23 1441 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-233ENST00000532787 ERICH6BQ5W0A0 696 aa9.98□□□□□ -0.81
CTNND1-233ENST00000532787 MTUS2Q5JR59 1369 aa9.98□□□□□ -0.81
CTNND1-233ENST00000532787 ARID3CA6NKF2 412 aa9.98□□□□□ -0.81
CTNND1-233ENST00000532787 CDCA8Q53HL2 280 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms