RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
CTNND1-232ENST00000532649 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
CTNND1-232ENST00000532649 SUPT5HO00267 1087 aaKnown RBP14.59□□□□□ -0.07
CTNND1-232ENST00000532649 SHROOM4Q9ULL8 1493 aa14.52□□□□□ -0.08
CTNND1-232ENST00000532649 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
CTNND1-232ENST00000532649 PELP1Q8IZL8 1130 aaKnown RBP13.91□□□□□ -0.18
CTNND1-232ENST00000532649 FAM9AQ8IZU1 332 aaPredicted RBP13.75□□□□□ -0.21
CTNND1-232ENST00000532649 APLP2Q06481 763 aa13.73□□□□□ -0.21
CTNND1-232ENST00000532649 RANGAP1P46060 587 aaPredicted RBP13.55□□□□□ -0.24
CTNND1-232ENST00000532649 TTBK1Q5TCY1 1321 aaPredicted RBP13.54□□□□□ -0.24
CTNND1-232ENST00000532649 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
CTNND1-232ENST00000532649 ATP1B4Q9UN42 357 aaPredicted RBP13.42□□□□□ -0.26
CTNND1-232ENST00000532649 ERICH6Q7L0X2 663 aa13.4□□□□□ -0.26
CTNND1-232ENST00000532649 UBTFP17480 764 aaKnown RBP13.37□□□□□ -0.27
CTNND1-232ENST00000532649 ABCC9O60706 1549 aa13.34□□□□□ -0.27
CTNND1-232ENST00000532649 CCER1Q8TC90 406 aaPredicted RBP13.31□□□□□ -0.28
CTNND1-232ENST00000532649 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
CTNND1-232ENST00000532649 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.34e-7■□□□□ 8.4
CTNND1-232ENST00000532649 PPARGC1BQ86YN6 1023 aaKnown RBP13.05□□□□□ -0.32
CTNND1-232ENST00000532649 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
CTNND1-232ENST00000532649 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
CTNND1-232ENST00000532649 MYT1Q01538 1121 aa13□□□□□ -0.33
CTNND1-232ENST00000532649 ZEB1P37275 1124 aaPredicted RBP12.97□□□□□ -0.33
CTNND1-232ENST00000532649 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
CTNND1-232ENST00000532649 CHIC1Q5VXU3 224 aa12.92□□□□□ -0.34
CTNND1-232ENST00000532649 CENPBP07199 599 aaPredicted RBP12.9□□□□□ -0.35
CTNND1-232ENST00000532649 NEFLP07196 543 aa12.89□□□□□ -0.35
CTNND1-232ENST00000532649 ITGAEP38570 1179 aa12.89□□□□□ -0.35
CTNND1-232ENST00000532649 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
CTNND1-232ENST00000532649 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
CTNND1-232ENST00000532649 TRIM26Q12899 539 aaPredicted RBP12.8□□□□□ -0.36
CTNND1-232ENST00000532649 SCRIBQ14160 1630 aa12.73□□□□□ -0.37
CTNND1-232ENST00000532649 FBLN2P98095 1184 aa12.71□□□□□ -0.38
CTNND1-232ENST00000532649 CCDC180Q9P1Z9 1646 aa12.68□□□□□ -0.38
CTNND1-232ENST00000532649 POLR3GLQ9BT43 218 aa12.66□□□□□ -0.38
CTNND1-232ENST00000532649 ZCCHC6Q5VYS8 1495 aaKnown RBP12.65□□□□□ -0.38
CTNND1-232ENST00000532649 YTHDC1Q96MU7 727 aaKnown RBP12.64□□□□□ -0.39
CTNND1-232ENST00000532649 FAM50AQ14320 339 aaKnown RBP12.62□□□□□ -0.39
CTNND1-232ENST00000532649 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
CTNND1-232ENST00000532649 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.41
CTNND1-232ENST00000532649 TRIM52Q96A61 297 aa12.51□□□□□ -0.41
CTNND1-232ENST00000532649 P3H3Q8IVL6 736 aa12.49□□□□□ -0.41
CTNND1-232ENST00000532649 RB1CC1Q8TDY2 1594 aa12.49□□□□□ -0.41
CTNND1-232ENST00000532649 ARID3CA6NKF2 412 aa12.47□□□□□ -0.41
CTNND1-232ENST00000532649 HRCP23327 699 aa12.46□□□□□ -0.41
CTNND1-232ENST00000532649 CSRNP3Q8WYN3 585 aa12.46□□□□□ -0.42
CTNND1-232ENST00000532649 ZNF316A6NFI3 1004 aaPredicted RBP12.45□□□□□ -0.42
CTNND1-232ENST00000532649 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
CTNND1-232ENST00000532649 NEUROD1Q13562 356 aa12.39□□□□□ -0.43
CTNND1-232ENST00000532649 ZNF326Q5BKZ1 582 aaKnown RBP12.34□□□□□ -0.43
CTNND1-232ENST00000532649 ZNF777Q9ULD5 760 aaPredicted RBP12.34□□□□□ -0.43
CTNND1-232ENST00000532649 NACADO15069 1562 aa12.33□□□□□ -0.44
CTNND1-232ENST00000532649 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
CTNND1-232ENST00000532649 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
CTNND1-232ENST00000532649 RTL5Q5HYW3 569 aaPredicted RBP12.29□□□□□ -0.44
CTNND1-232ENST00000532649 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
CTNND1-232ENST00000532649 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
CTNND1-232ENST00000532649 BCANQ96GW7 911 aa12.24□□□□□ -0.45
CTNND1-232ENST00000532649 DIEXFQ68CQ4 756 aaKnown RBP12.22□□□□□ -0.45
CTNND1-232ENST00000532649 CHMP7Q8WUX9 453 aaPredicted RBP12.21□□□□□ -0.46
CTNND1-232ENST00000532649 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
CTNND1-232ENST00000532649 ESF1Q9H501 851 aaKnown RBP12.18□□□□□ -0.46
CTNND1-232ENST00000532649 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
CTNND1-232ENST00000532649 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
CTNND1-232ENST00000532649 ANP32CO43423 234 aa12.1□□□□□ -0.47
CTNND1-232ENST00000532649 CHGAP10645 457 aaKnown RBP12.1□□□□□ -0.47
CTNND1-232ENST00000532649 STAG3Q9UJ98 1225 aa12.09□□□□□ -0.47
CTNND1-232ENST00000532649 ERCC6Q03468 1493 aa12.07□□□□□ -0.48
CTNND1-232ENST00000532649 NEFMP07197 916 aa12.07□□□□□ -0.48
CTNND1-232ENST00000532649 CHIC2Q9UKJ5 165 aa12.07□□□□□ -0.48
CTNND1-232ENST00000532649 BCL11AQ9H165 835 aa12.06□□□□□ -0.48
CTNND1-232ENST00000532649 BAZ1AQ9NRL2 1556 aaPredicted RBP12.06□□□□□ -0.48
CTNND1-232ENST00000532649 MTUS2Q5JR59 1369 aa12.05□□□□□ -0.48
CTNND1-232ENST00000532649 WRNQ14191 1432 aaPredicted RBP eCLIP12.05□□□□□ -0.48
CTNND1-232ENST00000532649 CANXP27824 592 aaKnown RBP12.05□□□□□ -0.48
CTNND1-232ENST00000532649 DCAF1Q9Y4B6 1507 aa12.05□□□□□ -0.48
CTNND1-232ENST00000532649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.04□□□□□ -0.481e-8■■□□□ 13.5
CTNND1-232ENST00000532649 CLIP1P30622 1438 aa12.02□□□□□ -0.48
CTNND1-232ENST00000532649 TSPY4P0CV99 314 aa12.01□□□□□ -0.49
CTNND1-232ENST00000532649 TSPY10P0CW01 314 aa12.01□□□□□ -0.49
CTNND1-232ENST00000532649 CECR2Q9BXF3 1484 aa12.01□□□□□ -0.49
CTNND1-232ENST00000532649 TONSLQ96HA7 1378 aa12.01□□□□□ -0.49
CTNND1-232ENST00000532649 KCNH8Q96L42 1107 aa11.99□□□□□ -0.49
CTNND1-232ENST00000532649 EEA1Q15075 1411 aa11.98□□□□□ -0.49
CTNND1-232ENST00000532649 KIF27Q86VH2 1401 aa11.98□□□□□ -0.49
CTNND1-232ENST00000532649 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
CTNND1-232ENST00000532649 PLEKHD1A6NEE1 506 aa11.95□□□□□ -0.5
CTNND1-232ENST00000532649 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
CTNND1-232ENST00000532649 RRP7BPQ9NSQ0 103 aa11.89□□□□□ -0.51
CTNND1-232ENST00000532649 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
CTNND1-232ENST00000532649 CDK11BP21127 795 aaKnown RBP11.88□□□□□ -0.51
CTNND1-232ENST00000532649 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
CTNND1-232ENST00000532649 ANP32BQ92688 251 aaKnown RBP11.86□□□□□ -0.51
CTNND1-232ENST00000532649 MROH2BQ7Z745 1585 aa11.85□□□□□ -0.51
CTNND1-232ENST00000532649 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
CTNND1-232ENST00000532649 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
CTNND1-232ENST00000532649 CFDP1Q9UEE9 299 aaPredicted RBP11.83□□□□□ -0.52
CTNND1-232ENST00000532649 CUX2O14529 1486 aa11.83□□□□□ -0.52
CTNND1-232ENST00000532649 SENP3Q9H4L4 574 aaPredicted RBP11.83□□□□□ -0.52
CTNND1-232ENST00000532649 EIF4G1Q04637 1599 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms