RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 DCAF8L2P0C7V8 631 aa15.21■□□□□ 0.02
CTNND1-206ENST00000415361 NISCHQ9Y2I1 1504 aa15.09■□□□□ 0.01
CTNND1-206ENST00000415361 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
CTNND1-206ENST00000415361 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
CTNND1-206ENST00000415361 EHMT2Q96KQ7 1210 aa13.52□□□□□ -0.25
CTNND1-206ENST00000415361 FAM9AQ8IZU1 332 aaPredicted RBP13.42□□□□□ -0.26
CTNND1-206ENST00000415361 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
CTNND1-206ENST00000415361 APLP2Q06481 763 aa13.33□□□□□ -0.27
CTNND1-206ENST00000415361 ABCC9O60706 1549 aa13.32□□□□□ -0.28
CTNND1-206ENST00000415361 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.314e-7■□□□□ 8.4
CTNND1-206ENST00000415361 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
CTNND1-206ENST00000415361 TRIM41Q8WV44 630 aa13.01□□□□□ -0.33
CTNND1-206ENST00000415361 TTBK1Q5TCY1 1321 aaPredicted RBP12.95□□□□□ -0.34
CTNND1-206ENST00000415361 ATP1B4Q9UN42 357 aaPredicted RBP12.92□□□□□ -0.34
CTNND1-206ENST00000415361 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
CTNND1-206ENST00000415361 ZEB1P37275 1124 aaPredicted RBP12.77□□□□□ -0.37
CTNND1-206ENST00000415361 CCER1Q8TC90 406 aaPredicted RBP12.77□□□□□ -0.37
CTNND1-206ENST00000415361 CENPBP07199 599 aaPredicted RBP12.67□□□□□ -0.38
CTNND1-206ENST00000415361 ERICH6Q7L0X2 663 aa12.65□□□□□ -0.38
CTNND1-206ENST00000415361 PCGF6Q9BYE7 350 aa12.63□□□□□ -0.39
CTNND1-206ENST00000415361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
CTNND1-206ENST00000415361 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
CTNND1-206ENST00000415361 CCDC180Q9P1Z9 1646 aa12.58□□□□□ -0.4
CTNND1-206ENST00000415361 SCRIBQ14160 1630 aa12.56□□□□□ -0.4
CTNND1-206ENST00000415361 NEFLP07196 543 aa12.51□□□□□ -0.41
CTNND1-206ENST00000415361 MYT1LQ9UL68 1186 aa12.51□□□□□ -0.41
CTNND1-206ENST00000415361 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
CTNND1-206ENST00000415361 FBLN2P98095 1184 aa12.46□□□□□ -0.41
CTNND1-206ENST00000415361 ZCCHC6Q5VYS8 1495 aaKnown RBP12.46□□□□□ -0.41
CTNND1-206ENST00000415361 CHIC1Q5VXU3 224 aa12.42□□□□□ -0.42
CTNND1-206ENST00000415361 RB1CC1Q8TDY2 1594 aa12.4□□□□□ -0.42
CTNND1-206ENST00000415361 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
CTNND1-206ENST00000415361 ITGAEP38570 1179 aa12.36□□□□□ -0.43
CTNND1-206ENST00000415361 NACADO15069 1562 aa12.24□□□□□ -0.45
CTNND1-206ENST00000415361 TRIM26Q12899 539 aaPredicted RBP12.23□□□□□ -0.45
CTNND1-206ENST00000415361 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.45
CTNND1-206ENST00000415361 MYT1Q01538 1121 aa12.19□□□□□ -0.46
CTNND1-206ENST00000415361 ARID3CA6NKF2 412 aa12.16□□□□□ -0.46
CTNND1-206ENST00000415361 YTHDC1Q96MU7 727 aaKnown RBP12.16□□□□□ -0.46
CTNND1-206ENST00000415361 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
CTNND1-206ENST00000415361 POLR3GLQ9BT43 218 aa12.13□□□□□ -0.47
CTNND1-206ENST00000415361 FAM50AQ14320 339 aaKnown RBP12.11□□□□□ -0.47
CTNND1-206ENST00000415361 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
CTNND1-206ENST00000415361 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
CTNND1-206ENST00000415361 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
CTNND1-206ENST00000415361 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
CTNND1-206ENST00000415361 CHMP7Q8WUX9 453 aaPredicted RBP11.98□□□□□ -0.49
CTNND1-206ENST00000415361 NPM1P06748 294 aaKnown RBP eCLIP11.97□□□□□ -0.49
CTNND1-206ENST00000415361 ERCC6Q03468 1493 aa11.96□□□□□ -0.49
CTNND1-206ENST00000415361 ZNF777Q9ULD5 760 aaPredicted RBP11.95□□□□□ -0.5
CTNND1-206ENST00000415361 RSF1Q96T23 1441 aaPredicted RBP11.95□□□□□ -0.5
CTNND1-206ENST00000415361 HRCP23327 699 aa11.92□□□□□ -0.5
CTNND1-206ENST00000415361 CNGB1Q14028 1251 aaPredicted RBP11.92□□□□□ -0.5
CTNND1-206ENST00000415361 DCAF1Q9Y4B6 1507 aa11.9□□□□□ -0.5
CTNND1-206ENST00000415361 CECR2Q9BXF3 1484 aa11.9□□□□□ -0.5
CTNND1-206ENST00000415361 CDK11AQ9UQ88 783 aaPredicted RBP11.89□□□□□ -0.51
CTNND1-206ENST00000415361 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
CTNND1-206ENST00000415361 CLSPNQ9HAW4 1339 aa11.89□□□□□ -0.51
CTNND1-206ENST00000415361 PLPPR3Q6T4P5 718 aa11.86□□□□□ -0.51
CTNND1-206ENST00000415361 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
CTNND1-206ENST00000415361 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
CTNND1-206ENST00000415361 NEUROD1Q13562 356 aa11.82□□□□□ -0.52
CTNND1-206ENST00000415361 BCANQ96GW7 911 aa11.82□□□□□ -0.52
CTNND1-206ENST00000415361 ZNF326Q5BKZ1 582 aaKnown RBP11.81□□□□□ -0.52
CTNND1-206ENST00000415361 ESF1Q9H501 851 aaKnown RBP11.81□□□□□ -0.52
CTNND1-206ENST00000415361 RTL5Q5HYW3 569 aaPredicted RBP11.8□□□□□ -0.52
CTNND1-206ENST00000415361 NEFMP07197 916 aa11.8□□□□□ -0.52
CTNND1-206ENST00000415361 WRNQ14191 1432 aaPredicted RBP eCLIP11.76□□□□□ -0.53
CTNND1-206ENST00000415361 ANP32CO43423 234 aa11.75□□□□□ -0.53
CTNND1-206ENST00000415361 DIEXFQ68CQ4 756 aaKnown RBP11.74□□□□□ -0.53
CTNND1-206ENST00000415361 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
CTNND1-206ENST00000415361 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.53
CTNND1-206ENST00000415361 SMARCA2P51531 1590 aa11.69□□□□□ -0.54
CTNND1-206ENST00000415361 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
CTNND1-206ENST00000415361 STAG3Q9UJ98 1225 aa11.68□□□□□ -0.54
CTNND1-206ENST00000415361 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
CTNND1-206ENST00000415361 KIF27Q86VH2 1401 aa11.67□□□□□ -0.54
CTNND1-206ENST00000415361 CHIC2Q9UKJ5 165 aa11.66□□□□□ -0.54
CTNND1-206ENST00000415361 PDS5BQ9NTI5 1447 aa11.65□□□□□ -0.54
CTNND1-206ENST00000415361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.541e-8■■□□□ 13.5
CTNND1-206ENST00000415361 MYO15BQ96JP2 1530 aa11.65□□□□□ -0.55
CTNND1-206ENST00000415361 MTUS2Q5JR59 1369 aa11.65□□□□□ -0.55
CTNND1-206ENST00000415361 SLC24A1O60721 1099 aa11.63□□□□□ -0.55
CTNND1-206ENST00000415361 PLEKHD1A6NEE1 506 aa11.62□□□□□ -0.55
CTNND1-206ENST00000415361 CCDC88BA6NC98 1476 aa11.61□□□□□ -0.55
CTNND1-206ENST00000415361 TSPY4P0CV99 314 aa11.61□□□□□ -0.55
CTNND1-206ENST00000415361 TSPY10P0CW01 314 aa11.61□□□□□ -0.55
CTNND1-206ENST00000415361 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
CTNND1-206ENST00000415361 CLIP1P30622 1438 aa11.61□□□□□ -0.55
CTNND1-206ENST00000415361 CUX2O14529 1486 aa11.59□□□□□ -0.55
CTNND1-206ENST00000415361 EEA1Q15075 1411 aa11.56□□□□□ -0.56
CTNND1-206ENST00000415361 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
CTNND1-206ENST00000415361 WIZO95785 1651 aa11.56□□□□□ -0.56
CTNND1-206ENST00000415361 EIF4G1Q04637 1599 aaKnown RBP11.55□□□□□ -0.56
CTNND1-206ENST00000415361 ATAD2BQ9ULI0 1458 aa11.55□□□□□ -0.56
CTNND1-206ENST00000415361 TDRD9Q8NDG6 1382 aaKnown RBP11.55□□□□□ -0.56
CTNND1-206ENST00000415361 ARID4BQ4LE39 1312 aaPredicted RBP11.55□□□□□ -0.56
CTNND1-206ENST00000415361 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
CTNND1-206ENST00000415361 SOGA1O94964 1423 aa11.53□□□□□ -0.56
CTNND1-206ENST00000415361 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms