Protein–RNA interactions for Protein: Q9NR30

DDX21, Nucleolar RNA helicase 2, humanhuman

Known RBP eCLIP

Length 783 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21Q9NR30 IGF2BP3-208ENST00000469723 556 ntTSL 510.84□□□□□ -0.674e-6■□□□□ 8.3
DDX21Q9NR30 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.963e-13■□□□□ 8.1
DDX21Q9NR30 GTF2A1-201ENST00000298173 1677 ntTSL 231.35■■■□□ 2.615e-8■□□□□ 8.1
DDX21Q9NR30 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.485e-8■□□□□ 8.1
DDX21Q9NR30 GTF2A1-204ENST00000556268 864 ntTSL 511.79□□□□□ -0.525e-8■□□□□ 8.1
DDX21Q9NR30 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.85e-8■□□□□ 8.1
DDX21Q9NR30 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC8.71□□□□□ -1.025e-8■□□□□ 8.1
DDX21Q9NR30 SNORA79-201ENST00000408376 140 ntBASIC1.63□□□□□ -2.155e-8■□□□□ 8.1
DDX21Q9NR30 GUK1-234ENST00000492871 1065 ntTSL 333.62■■■□□ 2.978e-6■□□□□ 8
DDX21Q9NR30 GUK1-215ENST00000462807 628 ntTSL 233.49■■■□□ 2.958e-6■□□□□ 8
DDX21Q9NR30 GUK1-227ENST00000485083 871 ntTSL 332.53■■■□□ 2.88e-6■□□□□ 8
DDX21Q9NR30 GUK1-235ENST00000493138 694 ntTSL 332.53■■■□□ 2.88e-6■□□□□ 8
DDX21Q9NR30 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.48■■■□□ 2.638e-6■□□□□ 8
DDX21Q9NR30 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29■■■□□ 2.238e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.148e-6■□□□□ 8
DDX21Q9NR30 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.03■■■□□ 2.088e-6■□□□□ 8
DDX21Q9NR30 GUK1-213ENST00000453943 656 ntTSL 1 (best)27.45■■□□□ 1.988e-6■□□□□ 8
DDX21Q9NR30 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.828e-6■□□□□ 8
DDX21Q9NR30 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.38■■□□□ 1.818e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-208ENST00000637724 435 ntTSL 326.32■■□□□ 1.88e-6■□□□□ 8
DDX21Q9NR30 GUK1-236ENST00000493209 735 ntTSL 525.39■■□□□ 1.668e-6■□□□□ 8
DDX21Q9NR30 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.34■■□□□ 1.498e-6■□□□□ 8
DDX21Q9NR30 GUK1-230ENST00000485838 774 ntTSL 323.84■■□□□ 1.418e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.168e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.048e-6■□□□□ 8
DDX21Q9NR30 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.028e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-204ENST00000587482 1311 ntTSL 521.07■□□□□ 0.968e-6■□□□□ 8
DDX21Q9NR30 GUK1-214ENST00000460224 639 ntTSL 520.23■□□□□ 0.838e-6■□□□□ 8
DDX21Q9NR30 GUK1-238ENST00000498092 865 ntTSL 519.94■□□□□ 0.788e-6■□□□□ 8
DDX21Q9NR30 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.64■□□□□ 0.738e-6■□□□□ 8
DDX21Q9NR30 DAZAP1-209ENST00000590419 508 ntTSL 318.97■□□□□ 0.638e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.598e-6■□□□□ 8
DDX21Q9NR30 GUK1-226ENST00000484953 273 ntTSL 218.08■□□□□ 0.488e-6■□□□□ 8
DDX21Q9NR30 GUK1-233ENST00000491613 959 ntTSL 317.69■□□□□ 0.428e-6■□□□□ 8
DDX21Q9NR30 GUK1-211ENST00000412265 1012 ntTSL 517.47■□□□□ 0.398e-6■□□□□ 8
DDX21Q9NR30 GUK1-221ENST00000472939 314 ntTSL 317.27■□□□□ 0.368e-6■□□□□ 8
DDX21Q9NR30 GUK1-229ENST00000485733 345 ntTSL 316.34■□□□□ 0.218e-6■□□□□ 8
DDX21Q9NR30 GUK1-212ENST00000435153 865 ntTSL 316.09■□□□□ 0.178e-6■□□□□ 8
DDX21Q9NR30 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.182e-9■□□□□ 8
DDX21Q9NR30 CBFA2T3-211ENST00000570046 284 ntTSL 312.58□□□□□ -0.48e-6■□□□□ 8
Retrieved 40 of 1,140 protein–RNA pairs in 38.1 ms