RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
CTNND1-235ENST00000533189 ABCC9O60706 1549 aa24.86■■□□□ 1.57
CTNND1-235ENST00000533189 CCDC180Q9P1Z9 1646 aa24.57■■□□□ 1.52
CTNND1-235ENST00000533189 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
CTNND1-235ENST00000533189 RB1CC1Q8TDY2 1594 aa23.55■■□□□ 1.36
CTNND1-235ENST00000533189 NACADO15069 1562 aa23.29■■□□□ 1.32
CTNND1-235ENST00000533189 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
CTNND1-235ENST00000533189 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
CTNND1-235ENST00000533189 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
CTNND1-235ENST00000533189 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
CTNND1-235ENST00000533189 BICRAQ9NZM4 1560 aa22.82■■□□□ 1.24
CTNND1-235ENST00000533189 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
CTNND1-235ENST00000533189 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
CTNND1-235ENST00000533189 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
CTNND1-235ENST00000533189 CECR2Q9BXF3 1484 aa22.43■■□□□ 1.18
CTNND1-235ENST00000533189 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
CTNND1-235ENST00000533189 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
CTNND1-235ENST00000533189 EIF4G1Q04637 1599 aaKnown RBP22.31■■□□□ 1.16
CTNND1-235ENST00000533189 DNAJC5Q9H3Z4 198 aa21.91■■□□□ 1.1
CTNND1-235ENST00000533189 CUX2O14529 1486 aa21.58■■□□□ 1.04
CTNND1-235ENST00000533189 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
CTNND1-235ENST00000533189 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
CTNND1-235ENST00000533189 ATAD2BQ9ULI0 1458 aa21.36■■□□□ 1.01
CTNND1-235ENST00000533189 SMARCA2P51531 1590 aa21.32■■□□□ 1
CTNND1-235ENST00000533189 HMGXB3Q12766 1538 aa21.31■■□□□ 1
CTNND1-235ENST00000533189 SMARCA4P51532 1647 aa21.29■■□□□ 1
CTNND1-235ENST00000533189 NESP48681 1621 aa21.25■□□□□ 0.99
CTNND1-235ENST00000533189 BAZ1BQ9UIG0 1483 aaKnown RBP21.17■□□□□ 0.98
CTNND1-235ENST00000533189 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.97
CTNND1-235ENST00000533189 THOC2Q8NI27 1593 aaKnown RBP21.11■□□□□ 0.97
CTNND1-235ENST00000533189 LAMC3Q9Y6N6 1575 aa21.08■□□□□ 0.97
CTNND1-235ENST00000533189 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
CTNND1-235ENST00000533189 KIF21AQ7Z4S6 1674 aa21.01■□□□□ 0.95
CTNND1-235ENST00000533189 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
CTNND1-235ENST00000533189 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
CTNND1-235ENST00000533189 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
CTNND1-235ENST00000533189 CADPSQ9ULU8 1353 aa20.82■□□□□ 0.92
CTNND1-235ENST00000533189 MRC2Q9UBG0 1479 aa20.8■□□□□ 0.92
CTNND1-235ENST00000533189 WDR62O43379 1518 aa20.75■□□□□ 0.91
CTNND1-235ENST00000533189 WIZO95785 1651 aa20.68■□□□□ 0.9
CTNND1-235ENST00000533189 CEP164Q9UPV0 1460 aa20.66■□□□□ 0.9
CTNND1-235ENST00000533189 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
CTNND1-235ENST00000533189 OSCARQ8IYS5 282 aa20.53■□□□□ 0.88
CTNND1-235ENST00000533189 CFTRP13569 1480 aa20.5■□□□□ 0.87
CTNND1-235ENST00000533189 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
CTNND1-235ENST00000533189 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
CTNND1-235ENST00000533189 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
CTNND1-235ENST00000533189 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
CTNND1-235ENST00000533189 RIMBP3CA6NJZ7 1639 aa20.31■□□□□ 0.84
CTNND1-235ENST00000533189 RIMBP3BA6NNM3 1639 aa20.31■□□□□ 0.84
CTNND1-235ENST00000533189 RIMBP3Q9UFD9 1639 aa20.31■□□□□ 0.84
CTNND1-235ENST00000533189 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
CTNND1-235ENST00000533189 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
CTNND1-235ENST00000533189 ARHGEF11O15085 1522 aa20.2■□□□□ 0.82
CTNND1-235ENST00000533189 TOPBP1Q92547 1522 aa20.17■□□□□ 0.82
CTNND1-235ENST00000533189 CCDC88BA6NC98 1476 aa20.15■□□□□ 0.82
CTNND1-235ENST00000533189 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
CTNND1-235ENST00000533189 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
CTNND1-235ENST00000533189 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
CTNND1-235ENST00000533189 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.8
CTNND1-235ENST00000533189 CHD1O14646 1710 aa20.07■□□□□ 0.8
CTNND1-235ENST00000533189 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.797e-8■■■□□ 16
CTNND1-235ENST00000533189 TARBP1Q13395 1621 aaKnown RBP20.01■□□□□ 0.79
CTNND1-235ENST00000533189 TRHP20396 242 aaPredicted RBP20■□□□□ 0.79
CTNND1-235ENST00000533189 FBLN2P98095 1184 aa19.99■□□□□ 0.79
CTNND1-235ENST00000533189 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
CTNND1-235ENST00000533189 POLA1P09884 1462 aaPredicted RBP19.92■□□□□ 0.78
CTNND1-235ENST00000533189 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
CTNND1-235ENST00000533189 SOGA1O94964 1423 aa19.85■□□□□ 0.77
CTNND1-235ENST00000533189 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.77
CTNND1-235ENST00000533189 SNAPC4Q5SXM2 1469 aa19.81■□□□□ 0.76
CTNND1-235ENST00000533189 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
CTNND1-235ENST00000533189 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
CTNND1-235ENST00000533189 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
CTNND1-235ENST00000533189 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
CTNND1-235ENST00000533189 FGD5Q6ZNL6 1462 aa19.77■□□□□ 0.76
CTNND1-235ENST00000533189 MAGI1Q96QZ7 1491 aaPredicted RBP19.75■□□□□ 0.75
CTNND1-235ENST00000533189 GRIN2BQ13224 1484 aa19.72■□□□□ 0.75
CTNND1-235ENST00000533189 SYNJ2O15056 1496 aa19.68■□□□□ 0.74
CTNND1-235ENST00000533189 CUX1P39880 1505 aa19.68■□□□□ 0.74
CTNND1-235ENST00000533189 AEBP2Q6ZN18 517 aaPredicted RBP19.68■□□□□ 0.74
CTNND1-235ENST00000533189 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
CTNND1-235ENST00000533189 GAPVD1Q14C86 1478 aa19.61■□□□□ 0.73
CTNND1-235ENST00000533189 ABCA5Q8WWZ7 1642 aa19.53■□□□□ 0.72
CTNND1-235ENST00000533189 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
CTNND1-235ENST00000533189 GRIN2AQ12879 1464 aa19.46■□□□□ 0.71
CTNND1-235ENST00000533189 ERCC6L2Q5T890 1561 aa19.44■□□□□ 0.7
CTNND1-235ENST00000533189 ADAMTS12P58397 1594 aa19.41■□□□□ 0.7
CTNND1-235ENST00000533189 CEP170Q5SW79 1584 aa19.41■□□□□ 0.7
CTNND1-235ENST00000533189 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.69
CTNND1-235ENST00000533189 NUP160Q12769 1436 aa19.38■□□□□ 0.69
CTNND1-235ENST00000533189 SHROOM2Q13796 1616 aa19.36■□□□□ 0.69
CTNND1-235ENST00000533189 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
CTNND1-235ENST00000533189 KIF13AQ9H1H9 1805 aa19.31■□□□□ 0.68
CTNND1-235ENST00000533189 BIVM-ERCC5R4GMW8 1640 aa19.31■□□□□ 0.68
CTNND1-235ENST00000533189 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
CTNND1-235ENST00000533189 ERICH3Q5RHP9 1530 aa19.28■□□□□ 0.68
CTNND1-235ENST00000533189 SUPT5HO00267 1087 aaKnown RBP19.25■□□□□ 0.67
CTNND1-235ENST00000533189 PRG4Q92954 1404 aaPredicted RBP19.25■□□□□ 0.67
CTNND1-235ENST00000533189 JPH4Q96JJ6 628 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms