Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
ABCA3Q99758 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC35.69■■■■□ 3.3
ABCA3Q99758 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
ABCA3Q99758 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
ABCA3Q99758 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
ABCA3Q99758 CEP120-209ENST00000515110 606 ntTSL 3 BASIC35.65■■■■□ 3.3
ABCA3Q99758 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
ABCA3Q99758 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
ABCA3Q99758 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC35.63■■■■□ 3.29
ABCA3Q99758 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
ABCA3Q99758 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC35.63■■■■□ 3.29
ABCA3Q99758 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC35.63■■■■□ 3.29
ABCA3Q99758 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
ABCA3Q99758 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
ABCA3Q99758 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
ABCA3Q99758 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
ABCA3Q99758 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC35.6■■■■□ 3.29
ABCA3Q99758 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC35.59■■■■□ 3.29
ABCA3Q99758 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC35.59■■■■□ 3.29
ABCA3Q99758 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
ABCA3Q99758 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
ABCA3Q99758 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC35.58■■■■□ 3.29
ABCA3Q99758 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC35.57■■■■□ 3.29
ABCA3Q99758 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC35.57■■■■□ 3.29
ABCA3Q99758 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
ABCA3Q99758 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC35.57■■■■□ 3.28
ABCA3Q99758 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
ABCA3Q99758 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC35.54■■■■□ 3.28
ABCA3Q99758 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC35.53■■■■□ 3.28
ABCA3Q99758 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC35.53■■■■□ 3.28
ABCA3Q99758 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
ABCA3Q99758 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC35.52■■■■□ 3.28
ABCA3Q99758 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC35.52■■■■□ 3.28
ABCA3Q99758 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC35.51■■■■□ 3.27
ABCA3Q99758 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
ABCA3Q99758 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
ABCA3Q99758 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC35.51■■■■□ 3.27
ABCA3Q99758 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
ABCA3Q99758 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC35.5■■■■□ 3.27
ABCA3Q99758 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
ABCA3Q99758 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC35.5■■■■□ 3.27
ABCA3Q99758 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA3Q99758 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA3Q99758 AC008813.1-201ENST00000536597 885 ntBASIC35.49■■■■□ 3.27
ABCA3Q99758 GFER-205ENST00000569451 517 ntTSL 5 BASIC35.49■■■■□ 3.27
ABCA3Q99758 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA3Q99758 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA3Q99758 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA3Q99758 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
ABCA3Q99758 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
ABCA3Q99758 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
ABCA3Q99758 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
ABCA3Q99758 AC022413.1-201ENST00000624602 984 ntBASIC35.45■■■■□ 3.27
ABCA3Q99758 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC35.43■■■■□ 3.26
ABCA3Q99758 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
ABCA3Q99758 AC018358.1-201ENST00000631079 1402 ntBASIC35.42■■■■□ 3.26
ABCA3Q99758 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC35.41■■■■□ 3.26
ABCA3Q99758 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC35.41■■■■□ 3.26
ABCA3Q99758 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC35.41■■■■□ 3.26
ABCA3Q99758 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
ABCA3Q99758 AC060814.1-201ENST00000554326 538 ntBASIC35.4■■■■□ 3.26
ABCA3Q99758 AL033527.3-201ENST00000566366 1196 ntBASIC35.4■■■■□ 3.26
ABCA3Q99758 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC35.4■■■■□ 3.26
ABCA3Q99758 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
ABCA3Q99758 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC35.39■■■■□ 3.26
ABCA3Q99758 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC35.39■■■■□ 3.26
ABCA3Q99758 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC35.39■■■■□ 3.26
ABCA3Q99758 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC35.39■■■■□ 3.26
ABCA3Q99758 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC35.37■■■■□ 3.25
ABCA3Q99758 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC35.37■■■■□ 3.25
ABCA3Q99758 HES4-202ENST00000428771 1040 ntTSL 2 BASIC35.37■■■■□ 3.25
ABCA3Q99758 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
ABCA3Q99758 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
ABCA3Q99758 AC010864.1-201ENST00000609407 1511 ntBASIC35.35■■■■□ 3.25
ABCA3Q99758 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
ABCA3Q99758 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
ABCA3Q99758 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
ABCA3Q99758 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
ABCA3Q99758 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC35.34■■■■□ 3.25
ABCA3Q99758 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC35.34■■■■□ 3.25
ABCA3Q99758 U85056.1-201ENST00000616429 682 ntBASIC35.34■■■■□ 3.25
ABCA3Q99758 HYI-213ENST00000583037 1322 ntTSL 5 BASIC35.33■■■■□ 3.25
ABCA3Q99758 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
ABCA3Q99758 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC35.32■■■■□ 3.25
ABCA3Q99758 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
ABCA3Q99758 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA3Q99758 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA3Q99758 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA3Q99758 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC35.31■■■■□ 3.24
ABCA3Q99758 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC35.3■■■■□ 3.24
ABCA3Q99758 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC35.29■■■■□ 3.24
ABCA3Q99758 KRT18P60-201ENST00000312876 1297 ntBASIC35.29■■■■□ 3.24
ABCA3Q99758 AC148477.6-201ENST00000623746 465 ntBASIC35.29■■■■□ 3.24
ABCA3Q99758 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC35.28■■■■□ 3.24
ABCA3Q99758 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC35.28■■■■□ 3.24
ABCA3Q99758 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC35.28■■■■□ 3.24
ABCA3Q99758 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC35.28■■■■□ 3.24
ABCA3Q99758 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
ABCA3Q99758 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC35.27■■■■□ 3.24
ABCA3Q99758 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 708.3 ms