Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
SLC6A18Q96N87 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.96■■□□□ 1.75
SLC6A18Q96N87 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.96■■□□□ 1.75
SLC6A18Q96N87 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SLC6A18Q96N87 AC010864.1-201ENST00000609407 1511 ntBASIC25.95■■□□□ 1.74
SLC6A18Q96N87 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
SLC6A18Q96N87 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
SLC6A18Q96N87 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SLC6A18Q96N87 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.93■■□□□ 1.74
SLC6A18Q96N87 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.92■■□□□ 1.74
SLC6A18Q96N87 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SLC6A18Q96N87 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SLC6A18Q96N87 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SLC6A18Q96N87 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SLC6A18Q96N87 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SLC6A18Q96N87 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.91■■□□□ 1.74
SLC6A18Q96N87 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.91■■□□□ 1.74
SLC6A18Q96N87 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.9■■□□□ 1.74
SLC6A18Q96N87 LINC00273-201ENST00000539813 1452 ntBASIC25.9■■□□□ 1.74
SLC6A18Q96N87 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SLC6A18Q96N87 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SLC6A18Q96N87 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SLC6A18Q96N87 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.88■■□□□ 1.73
SLC6A18Q96N87 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.88■■□□□ 1.73
SLC6A18Q96N87 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SLC6A18Q96N87 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC6A18Q96N87 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.87■■□□□ 1.73
SLC6A18Q96N87 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC6A18Q96N87 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SLC6A18Q96N87 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SLC6A18Q96N87 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SLC6A18Q96N87 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.86■■□□□ 1.73
SLC6A18Q96N87 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.86■■□□□ 1.73
SLC6A18Q96N87 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SLC6A18Q96N87 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SLC6A18Q96N87 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SLC6A18Q96N87 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC6A18Q96N87 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SLC6A18Q96N87 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.84■■□□□ 1.73
SLC6A18Q96N87 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SLC6A18Q96N87 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SLC6A18Q96N87 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SLC6A18Q96N87 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.82■■□□□ 1.72
SLC6A18Q96N87 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC6A18Q96N87 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
SLC6A18Q96N87 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.81■■□□□ 1.72
SLC6A18Q96N87 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.81■■□□□ 1.72
SLC6A18Q96N87 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SLC6A18Q96N87 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SLC6A18Q96N87 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.78■■□□□ 1.72
SLC6A18Q96N87 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SLC6A18Q96N87 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.78■■□□□ 1.72
SLC6A18Q96N87 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC6A18Q96N87 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SLC6A18Q96N87 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
SLC6A18Q96N87 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.76■■□□□ 1.71
SLC6A18Q96N87 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SLC6A18Q96N87 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SLC6A18Q96N87 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SLC6A18Q96N87 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SLC6A18Q96N87 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
SLC6A18Q96N87 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.75■■□□□ 1.71
SLC6A18Q96N87 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SLC6A18Q96N87 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.75■■□□□ 1.71
SLC6A18Q96N87 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
SLC6A18Q96N87 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
SLC6A18Q96N87 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.73■■□□□ 1.71
SLC6A18Q96N87 AC127502.1-201ENST00000399971 1502 ntBASIC25.73■■□□□ 1.71
SLC6A18Q96N87 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SLC6A18Q96N87 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SLC6A18Q96N87 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SLC6A18Q96N87 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
SLC6A18Q96N87 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
SLC6A18Q96N87 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SLC6A18Q96N87 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.7■■□□□ 1.7
SLC6A18Q96N87 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SLC6A18Q96N87 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SLC6A18Q96N87 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SLC6A18Q96N87 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SLC6A18Q96N87 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SLC6A18Q96N87 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
SLC6A18Q96N87 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.66■■□□□ 1.7
SLC6A18Q96N87 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.66■■□□□ 1.7
SLC6A18Q96N87 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SLC6A18Q96N87 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A18Q96N87 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.65■■□□□ 1.7
SLC6A18Q96N87 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A18Q96N87 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.65■■□□□ 1.7
SLC6A18Q96N87 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SLC6A18Q96N87 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms