Protein–RNA interactions for Protein: Q8WU76

SCFD2, Sec1 family domain-containing protein 2, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2Q8WU76 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.62■■■□□ 2.33
SCFD2Q8WU76 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.62■■■□□ 2.33
SCFD2Q8WU76 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
SCFD2Q8WU76 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.6■■■□□ 2.33
SCFD2Q8WU76 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC29.59■■■□□ 2.33
SCFD2Q8WU76 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.59■■■□□ 2.33
SCFD2Q8WU76 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SCFD2Q8WU76 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.59■■■□□ 2.33
SCFD2Q8WU76 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SCFD2Q8WU76 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
SCFD2Q8WU76 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SCFD2Q8WU76 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
SCFD2Q8WU76 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SCFD2Q8WU76 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.57■■■□□ 2.32
SCFD2Q8WU76 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SCFD2Q8WU76 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SCFD2Q8WU76 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SCFD2Q8WU76 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SCFD2Q8WU76 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
SCFD2Q8WU76 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SCFD2Q8WU76 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.55■■■□□ 2.32
SCFD2Q8WU76 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SCFD2Q8WU76 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SCFD2Q8WU76 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.54■■■□□ 2.32
SCFD2Q8WU76 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SCFD2Q8WU76 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SCFD2Q8WU76 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
SCFD2Q8WU76 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
SCFD2Q8WU76 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.53■■■□□ 2.32
SCFD2Q8WU76 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.53■■■□□ 2.32
SCFD2Q8WU76 LINC00273-201ENST00000539813 1452 ntBASIC29.53■■■□□ 2.32
SCFD2Q8WU76 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.53■■■□□ 2.32
SCFD2Q8WU76 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.53■■■□□ 2.32
SCFD2Q8WU76 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
SCFD2Q8WU76 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.52■■■□□ 2.32
SCFD2Q8WU76 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
SCFD2Q8WU76 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
SCFD2Q8WU76 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.5■■■□□ 2.31
SCFD2Q8WU76 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.5■■■□□ 2.31
SCFD2Q8WU76 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SCFD2Q8WU76 HSD17B1P1-201ENST00000590052 955 ntBASIC29.49■■■□□ 2.31
SCFD2Q8WU76 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SCFD2Q8WU76 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SCFD2Q8WU76 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SCFD2Q8WU76 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
SCFD2Q8WU76 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
SCFD2Q8WU76 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SCFD2Q8WU76 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SCFD2Q8WU76 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
SCFD2Q8WU76 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SCFD2Q8WU76 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
SCFD2Q8WU76 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SCFD2Q8WU76 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
SCFD2Q8WU76 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.41■■■□□ 2.3
SCFD2Q8WU76 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SCFD2Q8WU76 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCFD2Q8WU76 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SCFD2Q8WU76 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SCFD2Q8WU76 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SCFD2Q8WU76 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.38■■■□□ 2.29
SCFD2Q8WU76 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
SCFD2Q8WU76 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.38■■■□□ 2.29
SCFD2Q8WU76 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SCFD2Q8WU76 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
SCFD2Q8WU76 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
SCFD2Q8WU76 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.37■■■□□ 2.29
SCFD2Q8WU76 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.37■■■□□ 2.29
SCFD2Q8WU76 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
SCFD2Q8WU76 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.36■■■□□ 2.29
SCFD2Q8WU76 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.36■■■□□ 2.29
SCFD2Q8WU76 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.35■■■□□ 2.29
SCFD2Q8WU76 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
SCFD2Q8WU76 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
SCFD2Q8WU76 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
SCFD2Q8WU76 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.34■■■□□ 2.29
SCFD2Q8WU76 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.34■■■□□ 2.29
SCFD2Q8WU76 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SCFD2Q8WU76 AC127502.1-201ENST00000399971 1502 ntBASIC29.33■■■□□ 2.29
SCFD2Q8WU76 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
SCFD2Q8WU76 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SCFD2Q8WU76 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SCFD2Q8WU76 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SCFD2Q8WU76 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.31■■■□□ 2.28
SCFD2Q8WU76 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SCFD2Q8WU76 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SCFD2Q8WU76 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SCFD2Q8WU76 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SCFD2Q8WU76 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SCFD2Q8WU76 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
SCFD2Q8WU76 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.3■■■□□ 2.28
SCFD2Q8WU76 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
SCFD2Q8WU76 AL135925.1-201ENST00000605920 1701 ntBASIC29.29■■■□□ 2.28
SCFD2Q8WU76 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SCFD2Q8WU76 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.29■■■□□ 2.28
SCFD2Q8WU76 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.28■■■□□ 2.28
SCFD2Q8WU76 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SCFD2Q8WU76 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SCFD2Q8WU76 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
SCFD2Q8WU76 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.27■■■□□ 2.28
SCFD2Q8WU76 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.26■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms