Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
TRPM4Q8TD43 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
TRPM4Q8TD43 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
TRPM4Q8TD43 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.56■■■□□ 2.64
TRPM4Q8TD43 NTF6A-201ENST00000591175 560 ntBASIC31.56■■■□□ 2.64
TRPM4Q8TD43 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.56■■■□□ 2.64
TRPM4Q8TD43 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
TRPM4Q8TD43 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TRPM4Q8TD43 LINC00273-201ENST00000539813 1452 ntBASIC31.55■■■□□ 2.64
TRPM4Q8TD43 AC120057.4-201ENST00000624722 1615 ntBASIC31.55■■■□□ 2.64
TRPM4Q8TD43 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TRPM4Q8TD43 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRPM4Q8TD43 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TRPM4Q8TD43 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TRPM4Q8TD43 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.52■■■□□ 2.64
TRPM4Q8TD43 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.52■■■□□ 2.64
TRPM4Q8TD43 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TRPM4Q8TD43 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TRPM4Q8TD43 AC012354.3-201ENST00000623734 483 ntBASIC31.52■■■□□ 2.64
TRPM4Q8TD43 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
TRPM4Q8TD43 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
TRPM4Q8TD43 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
TRPM4Q8TD43 AC022413.1-201ENST00000624602 984 ntBASIC31.5■■■□□ 2.63
TRPM4Q8TD43 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRPM4Q8TD43 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
TRPM4Q8TD43 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.49■■■□□ 2.63
TRPM4Q8TD43 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRPM4Q8TD43 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRPM4Q8TD43 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRPM4Q8TD43 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
TRPM4Q8TD43 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRPM4Q8TD43 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TRPM4Q8TD43 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.46■■■□□ 2.63
TRPM4Q8TD43 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TRPM4Q8TD43 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRPM4Q8TD43 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRPM4Q8TD43 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRPM4Q8TD43 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TRPM4Q8TD43 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TRPM4Q8TD43 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.41■■■□□ 2.62
TRPM4Q8TD43 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRPM4Q8TD43 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TRPM4Q8TD43 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
TRPM4Q8TD43 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.39■■■□□ 2.62
TRPM4Q8TD43 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRPM4Q8TD43 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRPM4Q8TD43 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
TRPM4Q8TD43 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
TRPM4Q8TD43 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TRPM4Q8TD43 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRPM4Q8TD43 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TRPM4Q8TD43 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRPM4Q8TD43 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TRPM4Q8TD43 AC008813.1-201ENST00000536597 885 ntBASIC31.36■■■□□ 2.61
TRPM4Q8TD43 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
TRPM4Q8TD43 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.36■■■□□ 2.61
TRPM4Q8TD43 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.36■■■□□ 2.61
TRPM4Q8TD43 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
TRPM4Q8TD43 AL033527.3-201ENST00000566366 1196 ntBASIC31.35■■■□□ 2.61
TRPM4Q8TD43 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.34■■■□□ 2.61
TRPM4Q8TD43 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TRPM4Q8TD43 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TRPM4Q8TD43 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
TRPM4Q8TD43 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.33■■■□□ 2.61
TRPM4Q8TD43 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.33■■■□□ 2.61
TRPM4Q8TD43 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRPM4Q8TD43 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.31■■■□□ 2.6
TRPM4Q8TD43 AL161658.1-201ENST00000623641 1967 ntBASIC31.31■■■□□ 2.6
TRPM4Q8TD43 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
TRPM4Q8TD43 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.31■■■□□ 2.6
TRPM4Q8TD43 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
TRPM4Q8TD43 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TRPM4Q8TD43 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TRPM4Q8TD43 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TRPM4Q8TD43 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
TRPM4Q8TD43 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRPM4Q8TD43 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TRPM4Q8TD43 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRPM4Q8TD43 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRPM4Q8TD43 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TRPM4Q8TD43 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRPM4Q8TD43 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TRPM4Q8TD43 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.27■■■□□ 2.6
TRPM4Q8TD43 AC018358.1-201ENST00000631079 1402 ntBASIC31.27■■■□□ 2.6
TRPM4Q8TD43 U85056.1-201ENST00000616429 682 ntBASIC31.27■■■□□ 2.6
TRPM4Q8TD43 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.27■■■□□ 2.6
TRPM4Q8TD43 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.26■■■□□ 2.59
TRPM4Q8TD43 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
TRPM4Q8TD43 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.26■■■□□ 2.59
TRPM4Q8TD43 AC010864.1-201ENST00000609407 1511 ntBASIC31.25■■■□□ 2.59
TRPM4Q8TD43 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
TRPM4Q8TD43 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TRPM4Q8TD43 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.24■■■□□ 2.59
TRPM4Q8TD43 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
TRPM4Q8TD43 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
TRPM4Q8TD43 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRPM4Q8TD43 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.22■■■□□ 2.59
TRPM4Q8TD43 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRPM4Q8TD43 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRPM4Q8TD43 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms