Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 BX255925.1-201ENST00000566954 1854 ntBASIC17.27■□□□□ 0.36
LINC00308Q8TCZ7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LINC00308Q8TCZ7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00308Q8TCZ7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC00308Q8TCZ7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00308Q8TCZ7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00308Q8TCZ7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00308Q8TCZ7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00308Q8TCZ7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC00308Q8TCZ7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00308Q8TCZ7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00308Q8TCZ7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00308Q8TCZ7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00308Q8TCZ7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00308Q8TCZ7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00308Q8TCZ7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00308Q8TCZ7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00308Q8TCZ7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00308Q8TCZ7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00308Q8TCZ7 AL449106.1-201ENST00000608517 1980 ntBASIC17.22■□□□□ 0.35
LINC00308Q8TCZ7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC00308Q8TCZ7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00308Q8TCZ7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00308Q8TCZ7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LINC00308Q8TCZ7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00308Q8TCZ7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00308Q8TCZ7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00308Q8TCZ7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00308Q8TCZ7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC00308Q8TCZ7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC00308Q8TCZ7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00308Q8TCZ7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00308Q8TCZ7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00308Q8TCZ7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00308Q8TCZ7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC17.2■□□□□ 0.34
LINC00308Q8TCZ7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LINC00308Q8TCZ7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC00308Q8TCZ7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00308Q8TCZ7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00308Q8TCZ7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LINC00308Q8TCZ7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00308Q8TCZ7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00308Q8TCZ7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00308Q8TCZ7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.19■□□□□ 0.34
LINC00308Q8TCZ7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00308Q8TCZ7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00308Q8TCZ7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00308Q8TCZ7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00308Q8TCZ7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00308Q8TCZ7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC00308Q8TCZ7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.18■□□□□ 0.34
LINC00308Q8TCZ7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00308Q8TCZ7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC00308Q8TCZ7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00308Q8TCZ7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00308Q8TCZ7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00308Q8TCZ7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00308Q8TCZ7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC00308Q8TCZ7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00308Q8TCZ7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00308Q8TCZ7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LINC00308Q8TCZ7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00308Q8TCZ7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC00308Q8TCZ7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00308Q8TCZ7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00308Q8TCZ7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00308Q8TCZ7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.14■□□□□ 0.33
LINC00308Q8TCZ7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00308Q8TCZ7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.14■□□□□ 0.33
LINC00308Q8TCZ7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00308Q8TCZ7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00308Q8TCZ7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00308Q8TCZ7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00308Q8TCZ7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.12■□□□□ 0.33
LINC00308Q8TCZ7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00308Q8TCZ7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00308Q8TCZ7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00308Q8TCZ7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00308Q8TCZ7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00308Q8TCZ7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.11■□□□□ 0.33
LINC00308Q8TCZ7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00308Q8TCZ7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LINC00308Q8TCZ7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
LINC00308Q8TCZ7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC00308Q8TCZ7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LINC00308Q8TCZ7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00308Q8TCZ7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00308Q8TCZ7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00308Q8TCZ7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00308Q8TCZ7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00308Q8TCZ7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00308Q8TCZ7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LINC00308Q8TCZ7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00308Q8TCZ7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00308Q8TCZ7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC17.09■□□□□ 0.33
LINC00308Q8TCZ7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC00308Q8TCZ7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC00308Q8TCZ7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00308Q8TCZ7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00308Q8TCZ7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms