Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
RTTNQ86VV8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RTTNQ86VV8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.81■■□□□ 1.24
RTTNQ86VV8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTTNQ86VV8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.8■■□□□ 1.24
RTTNQ86VV8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.8■■□□□ 1.24
RTTNQ86VV8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.8■■□□□ 1.24
RTTNQ86VV8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTTNQ86VV8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RTTNQ86VV8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RTTNQ86VV8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.79■■□□□ 1.24
RTTNQ86VV8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RTTNQ86VV8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.78■■□□□ 1.24
RTTNQ86VV8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RTTNQ86VV8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
RTTNQ86VV8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RTTNQ86VV8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RTTNQ86VV8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RTTNQ86VV8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RTTNQ86VV8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
RTTNQ86VV8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.76■■□□□ 1.23
RTTNQ86VV8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTTNQ86VV8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RTTNQ86VV8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
RTTNQ86VV8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.76■■□□□ 1.23
RTTNQ86VV8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
RTTNQ86VV8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.75■■□□□ 1.23
RTTNQ86VV8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.73■■□□□ 1.23
RTTNQ86VV8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.73■■□□□ 1.23
RTTNQ86VV8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTTNQ86VV8 MIR4449-201ENST00000578365 66 ntBASIC22.73■■□□□ 1.23
RTTNQ86VV8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RTTNQ86VV8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
RTTNQ86VV8 AL139393.2-201ENST00000608721 2025 ntBASIC22.72■■□□□ 1.23
RTTNQ86VV8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RTTNQ86VV8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RTTNQ86VV8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.72■■□□□ 1.23
RTTNQ86VV8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RTTNQ86VV8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RTTNQ86VV8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.71■■□□□ 1.23
RTTNQ86VV8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RTTNQ86VV8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RTTNQ86VV8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RTTNQ86VV8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RTTNQ86VV8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RTTNQ86VV8 AC108673.1-201ENST00000510422 1159 ntBASIC22.69■■□□□ 1.22
RTTNQ86VV8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RTTNQ86VV8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTTNQ86VV8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RTTNQ86VV8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.67■■□□□ 1.22
RTTNQ86VV8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTTNQ86VV8 MIR6090-201ENST00000622481 60 ntBASIC22.67■■□□□ 1.22
RTTNQ86VV8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RTTNQ86VV8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RTTNQ86VV8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RTTNQ86VV8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.66■■□□□ 1.22
RTTNQ86VV8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTTNQ86VV8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RTTNQ86VV8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTTNQ86VV8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.65■■□□□ 1.22
RTTNQ86VV8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RTTNQ86VV8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTTNQ86VV8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTTNQ86VV8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RTTNQ86VV8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
RTTNQ86VV8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
RTTNQ86VV8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RTTNQ86VV8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.63■■□□□ 1.21
RTTNQ86VV8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
RTTNQ86VV8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.62■■□□□ 1.21
RTTNQ86VV8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.62■■□□□ 1.21
RTTNQ86VV8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTTNQ86VV8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RTTNQ86VV8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.62■■□□□ 1.21
RTTNQ86VV8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTTNQ86VV8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RTTNQ86VV8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RTTNQ86VV8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
RTTNQ86VV8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RTTNQ86VV8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.59■■□□□ 1.21
RTTNQ86VV8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RTTNQ86VV8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RTTNQ86VV8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RTTNQ86VV8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RTTNQ86VV8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RTTNQ86VV8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RTTNQ86VV8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RTTNQ86VV8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.57■■□□□ 1.2
RTTNQ86VV8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.57■■□□□ 1.2
RTTNQ86VV8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.56■■□□□ 1.2
RTTNQ86VV8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RTTNQ86VV8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.56■■□□□ 1.2
RTTNQ86VV8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RTTNQ86VV8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTTNQ86VV8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTTNQ86VV8 HSD17B1P1-201ENST00000590052 955 ntBASIC22.55■■□□□ 1.2
RTTNQ86VV8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.55■■□□□ 1.2
RTTNQ86VV8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTTNQ86VV8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTTNQ86VV8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms