Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
RNF180Q86T96 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RNF180Q86T96 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.39■■■□□ 2.29
RNF180Q86T96 LINC00273-201ENST00000539813 1452 ntBASIC29.38■■■□□ 2.29
RNF180Q86T96 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
RNF180Q86T96 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.38■■■□□ 2.29
RNF180Q86T96 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
RNF180Q86T96 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
RNF180Q86T96 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.37■■■□□ 2.29
RNF180Q86T96 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
RNF180Q86T96 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
RNF180Q86T96 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RNF180Q86T96 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RNF180Q86T96 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RNF180Q86T96 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.34■■■□□ 2.29
RNF180Q86T96 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.34■■■□□ 2.29
RNF180Q86T96 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
RNF180Q86T96 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.34■■■□□ 2.29
RNF180Q86T96 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
RNF180Q86T96 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RNF180Q86T96 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RNF180Q86T96 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
RNF180Q86T96 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RNF180Q86T96 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.3■■■□□ 2.28
RNF180Q86T96 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
RNF180Q86T96 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
RNF180Q86T96 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
RNF180Q86T96 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RNF180Q86T96 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.29■■■□□ 2.28
RNF180Q86T96 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.29■■■□□ 2.28
RNF180Q86T96 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RNF180Q86T96 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
RNF180Q86T96 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
RNF180Q86T96 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
RNF180Q86T96 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.27■■■□□ 2.28
RNF180Q86T96 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
RNF180Q86T96 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RNF180Q86T96 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RNF180Q86T96 AL161658.1-201ENST00000623641 1967 ntBASIC29.24■■■□□ 2.27
RNF180Q86T96 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RNF180Q86T96 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
RNF180Q86T96 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.24■■■□□ 2.27
RNF180Q86T96 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
RNF180Q86T96 AC022413.1-201ENST00000624602 984 ntBASIC29.21■■■□□ 2.27
RNF180Q86T96 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.26
RNF180Q86T96 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
RNF180Q86T96 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.19■■■□□ 2.26
RNF180Q86T96 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
RNF180Q86T96 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
RNF180Q86T96 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
RNF180Q86T96 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.18■■■□□ 2.26
RNF180Q86T96 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
RNF180Q86T96 AC010864.1-201ENST00000609407 1511 ntBASIC29.18■■■□□ 2.26
RNF180Q86T96 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
RNF180Q86T96 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.17■■■□□ 2.26
RNF180Q86T96 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.17■■■□□ 2.26
RNF180Q86T96 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.17■■■□□ 2.26
RNF180Q86T96 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.17■■■□□ 2.26
RNF180Q86T96 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.17■■■□□ 2.26
RNF180Q86T96 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
RNF180Q86T96 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
RNF180Q86T96 AC008813.1-201ENST00000536597 885 ntBASIC29.16■■■□□ 2.26
RNF180Q86T96 NTF6A-201ENST00000591175 560 ntBASIC29.16■■■□□ 2.26
RNF180Q86T96 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
RNF180Q86T96 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
RNF180Q86T96 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.14■■■□□ 2.26
RNF180Q86T96 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
RNF180Q86T96 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.14■■■□□ 2.26
RNF180Q86T96 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
RNF180Q86T96 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RNF180Q86T96 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
RNF180Q86T96 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.14■■■□□ 2.25
RNF180Q86T96 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.13■■■□□ 2.25
RNF180Q86T96 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
RNF180Q86T96 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RNF180Q86T96 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RNF180Q86T96 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RNF180Q86T96 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RNF180Q86T96 AC012354.3-201ENST00000623734 483 ntBASIC29.11■■■□□ 2.25
RNF180Q86T96 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RNF180Q86T96 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.1■■■□□ 2.25
RNF180Q86T96 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
RNF180Q86T96 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RNF180Q86T96 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.08■■■□□ 2.25
RNF180Q86T96 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RNF180Q86T96 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
RNF180Q86T96 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
RNF180Q86T96 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
RNF180Q86T96 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.05■■■□□ 2.24
RNF180Q86T96 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
RNF180Q86T96 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
RNF180Q86T96 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
RNF180Q86T96 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
RNF180Q86T96 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
RNF180Q86T96 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
RNF180Q86T96 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RNF180Q86T96 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
RNF180Q86T96 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
RNF180Q86T96 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
RNF180Q86T96 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms