Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CCL21O00585 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCL21O00585 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCL21O00585 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.29■■□□□ 1.32
CCL21O00585 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.29■■□□□ 1.32
CCL21O00585 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCL21O00585 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CCL21O00585 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.28■■□□□ 1.32
CCL21O00585 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CCL21O00585 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCL21O00585 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCL21O00585 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCL21O00585 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.27■■□□□ 1.32
CCL21O00585 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCL21O00585 LINC00273-201ENST00000539813 1452 ntBASIC23.26■■□□□ 1.31
CCL21O00585 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CCL21O00585 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCL21O00585 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCL21O00585 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCL21O00585 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCL21O00585 RNF126P1-201ENST00000567452 1320 ntBASIC23.25■■□□□ 1.31
CCL21O00585 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
CCL21O00585 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC23.24■■□□□ 1.31
CCL21O00585 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CCL21O00585 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCL21O00585 AL161658.1-201ENST00000623641 1967 ntBASIC23.23■■□□□ 1.31
CCL21O00585 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCL21O00585 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCL21O00585 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CCL21O00585 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCL21O00585 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CCL21O00585 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCL21O00585 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.21■■□□□ 1.31
CCL21O00585 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCL21O00585 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CCL21O00585 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCL21O00585 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCL21O00585 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCL21O00585 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCL21O00585 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.19■■□□□ 1.3
CCL21O00585 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCL21O00585 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCL21O00585 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCL21O00585 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.16■■□□□ 1.3
CCL21O00585 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCL21O00585 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CCL21O00585 AC022413.1-201ENST00000624602 984 ntBASIC23.16■■□□□ 1.3
CCL21O00585 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CCL21O00585 AC010864.1-201ENST00000609407 1511 ntBASIC23.14■■□□□ 1.3
CCL21O00585 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
CCL21O00585 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.14■■□□□ 1.29
CCL21O00585 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCL21O00585 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCL21O00585 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.13■■□□□ 1.29
CCL21O00585 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCL21O00585 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCL21O00585 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCL21O00585 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCL21O00585 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CCL21O00585 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CCL21O00585 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.1■■□□□ 1.29
CCL21O00585 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCL21O00585 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.1■■□□□ 1.29
CCL21O00585 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCL21O00585 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCL21O00585 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCL21O00585 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.09■■□□□ 1.29
CCL21O00585 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.09■■□□□ 1.29
CCL21O00585 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
CCL21O00585 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CCL21O00585 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CCL21O00585 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCL21O00585 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.08■■□□□ 1.29
CCL21O00585 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCL21O00585 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.08■■□□□ 1.29
CCL21O00585 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCL21O00585 AC008813.1-201ENST00000536597 885 ntBASIC23.08■■□□□ 1.29
CCL21O00585 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
CCL21O00585 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.07■■□□□ 1.28
CCL21O00585 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCL21O00585 NTF6A-201ENST00000591175 560 ntBASIC23.07■■□□□ 1.28
CCL21O00585 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCL21O00585 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCL21O00585 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CCL21O00585 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCL21O00585 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCL21O00585 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCL21O00585 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CCL21O00585 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCL21O00585 AC012354.3-201ENST00000623734 483 ntBASIC23.04■■□□□ 1.28
CCL21O00585 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCL21O00585 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.03■■□□□ 1.28
CCL21O00585 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCL21O00585 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCL21O00585 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCL21O00585 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CCL21O00585 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCL21O00585 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCL21O00585 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.99■■□□□ 1.27
CCL21O00585 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms