Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 AL137784.2-201ENST00000607332 1000 ntBASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
TRGV1A0A0A0MS02 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 CNN2P6-201ENST00000439038 900 ntBASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 AL356652.1-201ENST00000615962 565 ntBASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 AC090340.1-201ENST00000620778 4980 ntBASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 AC068338.2-201ENST00000563278 1430 ntBASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 AC087633.2-202ENST00000565166 1439 ntBASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 CYP21A1P-202ENST00000354927 1481 ntBASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRGV1A0A0A0MS02 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 CYP2T1P-201ENST00000432607 1285 ntBASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 RARRES2P4-201ENST00000514074 484 ntBASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 SMG8-203ENST00000578922 2178 ntBASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 DPP3P2-201ENST00000416030 1696 ntBASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
TRGV1A0A0A0MS02 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRGV1A0A0A0MS02 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms