RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.54
SKIDA1-202ENST00000449193 SUPT5HO00267 1087 aaKnown RBP29■■■□□ 2.23
SKIDA1-202ENST00000449193 NISCHQ9Y2I1 1504 aa28.66■■■□□ 2.18
SKIDA1-202ENST00000449193 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.13
SKIDA1-202ENST00000449193 EHMT2Q96KQ7 1210 aa28.2■■■□□ 2.1
SKIDA1-202ENST00000449193 APLP2Q06481 763 aa28.07■■■□□ 2.08
SKIDA1-202ENST00000449193 FAM9AQ8IZU1 332 aaPredicted RBP27.98■■■□□ 2.07
SKIDA1-202ENST00000449193 PELP1Q8IZL8 1130 aaKnown RBP27.91■■■□□ 2.06
SKIDA1-202ENST00000449193 TTBK1Q5TCY1 1321 aaPredicted RBP27.24■■□□□ 1.95
SKIDA1-202ENST00000449193 RANGAP1P46060 587 aaPredicted RBP27.12■■□□□ 1.93
SKIDA1-202ENST00000449193 ATP1B4Q9UN42 357 aaPredicted RBP27.08■■□□□ 1.93
SKIDA1-202ENST00000449193 PCGF6Q9BYE7 350 aa26.94■■□□□ 1.9
SKIDA1-202ENST00000449193 TRIM41Q8WV44 630 aa26.94■■□□□ 1.9
SKIDA1-202ENST00000449193 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
SKIDA1-202ENST00000449193 CCER1Q8TC90 406 aaPredicted RBP26.71■■□□□ 1.87
SKIDA1-202ENST00000449193 ERICH6Q7L0X2 663 aa26.68■■□□□ 1.86
SKIDA1-202ENST00000449193 ZEB1P37275 1124 aaPredicted RBP26.68■■□□□ 1.86
SKIDA1-202ENST00000449193 CENPBP07199 599 aaPredicted RBP26.66■■□□□ 1.86
SKIDA1-202ENST00000449193 NEFLP07196 543 aa26.34■■□□□ 1.81
SKIDA1-202ENST00000449193 MYT1LQ9UL68 1186 aa26.3■■□□□ 1.8
SKIDA1-202ENST00000449193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.2■■□□□ 1.78
SKIDA1-202ENST00000449193 HNRNPUL2Q1KMD3 747 aaKnown RBP26.2■■□□□ 1.78
SKIDA1-202ENST00000449193 YTHDC1Q96MU7 727 aaKnown RBP26.01■■□□□ 1.75
SKIDA1-202ENST00000449193 PPARGC1BQ86YN6 1023 aaKnown RBP25.97■■□□□ 1.75
SKIDA1-202ENST00000449193 ITGAEP38570 1179 aa25.91■■□□□ 1.74
SKIDA1-202ENST00000449193 POLR3GLQ9BT43 218 aa25.89■■□□□ 1.73
SKIDA1-202ENST00000449193 TRIM26Q12899 539 aaPredicted RBP25.76■■□□□ 1.71
SKIDA1-202ENST00000449193 DAXXQ9UER7 740 aaPredicted RBP25.72■■□□□ 1.71
SKIDA1-202ENST00000449193 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
SKIDA1-202ENST00000449193 SLC4A1APQ9BWU0 796 aaKnown RBP25.6■■□□□ 1.69
SKIDA1-202ENST00000449193 CNGB1Q14028 1251 aaPredicted RBP25.5■■□□□ 1.67
SKIDA1-202ENST00000449193 LOC105371045A0A1W2PR82 267 aa25.34■■□□□ 1.65
SKIDA1-202ENST00000449193 MYT1Q01538 1121 aa25.3■■□□□ 1.64
SKIDA1-202ENST00000449193 HRCP23327 699 aa25.3■■□□□ 1.64
SKIDA1-202ENST00000449193 FAM50AQ14320 339 aaKnown RBP25.29■■□□□ 1.64
SKIDA1-202ENST00000449193 PABPN1Q86U42 306 aaKnown RBP eCLIP25.25■■□□□ 1.63
SKIDA1-202ENST00000449193 TRIM52Q96A61 297 aa25.24■■□□□ 1.63
SKIDA1-202ENST00000449193 ABCC9O60706 1549 aa25.19■■□□□ 1.62
SKIDA1-202ENST00000449193 CLSPNQ9HAW4 1339 aa25.18■■□□□ 1.62
SKIDA1-202ENST00000449193 FBLN2P98095 1184 aa25.09■■□□□ 1.61
SKIDA1-202ENST00000449193 ZNF316A6NFI3 1004 aaPredicted RBP25.06■■□□□ 1.6
SKIDA1-202ENST00000449193 NEUROD1Q13562 356 aa24.96■■□□□ 1.59
SKIDA1-202ENST00000449193 ZNF326Q5BKZ1 582 aaKnown RBP24.92■■□□□ 1.58
SKIDA1-202ENST00000449193 ZBTB47Q9UFB7 747 aaPredicted RBP24.9■■□□□ 1.58
SKIDA1-202ENST00000449193 RTL5Q5HYW3 569 aaPredicted RBP24.87■■□□□ 1.57
SKIDA1-202ENST00000449193 DIEXFQ68CQ4 756 aaKnown RBP24.86■■□□□ 1.57
SKIDA1-202ENST00000449193 BCANQ96GW7 911 aa24.86■■□□□ 1.57
SKIDA1-202ENST00000449193 SLC24A1O60721 1099 aa24.77■■□□□ 1.56
SKIDA1-202ENST00000449193 NEFMP07197 916 aa24.76■■□□□ 1.55
SKIDA1-202ENST00000449193 ANP32CO43423 234 aa24.74■■□□□ 1.55
SKIDA1-202ENST00000449193 ESF1Q9H501 851 aaKnown RBP24.64■■□□□ 1.54
SKIDA1-202ENST00000449193 CANXP27824 592 aaKnown RBP24.64■■□□□ 1.53
SKIDA1-202ENST00000449193 ARID3CA6NKF2 412 aa24.61■■□□□ 1.53
SKIDA1-202ENST00000449193 CDK11AQ9UQ88 783 aaPredicted RBP24.61■■□□□ 1.53
SKIDA1-202ENST00000449193 P3H3Q8IVL6 736 aa24.6■■□□□ 1.53
SKIDA1-202ENST00000449193 ZNF777Q9ULD5 760 aaPredicted RBP24.58■■□□□ 1.52
SKIDA1-202ENST00000449193 BCL11AQ9H165 835 aa24.47■■□□□ 1.51
SKIDA1-202ENST00000449193 NPM1P06748 294 aaKnown RBP eCLIP24.45■■□□□ 1.5
SKIDA1-202ENST00000449193 CSRNP3Q8WYN3 585 aa24.44■■□□□ 1.5
SKIDA1-202ENST00000449193 STAG3Q9UJ98 1225 aa24.43■■□□□ 1.5
SKIDA1-202ENST00000449193 CHGAP10645 457 aaKnown RBP24.34■■□□□ 1.49
SKIDA1-202ENST00000449193 PLPPR3Q6T4P5 718 aa24.27■■□□□ 1.48
SKIDA1-202ENST00000449193 TONSLQ96HA7 1378 aa24.14■■□□□ 1.46
SKIDA1-202ENST00000449193 GTF3C3Q9Y5Q9 886 aa24.13■■□□□ 1.45
SKIDA1-202ENST00000449193 SCRIBQ14160 1630 aa24.12■■□□□ 1.45
SKIDA1-202ENST00000449193 ANP32AP39687 249 aaKnown RBP24.08■■□□□ 1.45
SKIDA1-202ENST00000449193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.03■■□□□ 1.44
SKIDA1-202ENST00000449193 TSPY4P0CV99 314 aa23.99■■□□□ 1.43
SKIDA1-202ENST00000449193 TSPY10P0CW01 314 aa23.99■■□□□ 1.43
SKIDA1-202ENST00000449193 HSP90AA1P07900 732 aaKnown RBP23.96■■□□□ 1.43
SKIDA1-202ENST00000449193 CHMP7Q8WUX9 453 aaPredicted RBP23.94■■□□□ 1.42
SKIDA1-202ENST00000449193 UPF2Q9HAU5 1272 aaKnown RBP23.93■■□□□ 1.42
SKIDA1-202ENST00000449193 NPM2Q86SE8 214 aaKnown RBP23.93■■□□□ 1.42
SKIDA1-202ENST00000449193 CHIC2Q9UKJ5 165 aa23.92■■□□□ 1.42
SKIDA1-202ENST00000449193 ANP32BQ92688 251 aaKnown RBP23.89■■□□□ 1.42
SKIDA1-202ENST00000449193 SCAF1Q9H7N4 1312 aaKnown RBP23.89■■□□□ 1.41
SKIDA1-202ENST00000449193 FAM9BQ8IZU0 186 aa23.84■■□□□ 1.41
SKIDA1-202ENST00000449193 WDR43Q15061 677 aaKnown RBP eCLIP23.83■■□□□ 1.41
SKIDA1-202ENST00000449193 HNRNPUQ00839 825 aaKnown RBP eCLIP23.83■■□□□ 1.41
SKIDA1-202ENST00000449193 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.83■■□□□ 1.41
SKIDA1-202ENST00000449193 TMC1Q8TDI8 760 aa23.82■■□□□ 1.4
SKIDA1-202ENST00000449193 MTUS2Q5JR59 1369 aa23.82■■□□□ 1.4
SKIDA1-202ENST00000449193 KDM2AQ9Y2K7 1162 aa23.78■■□□□ 1.4
SKIDA1-202ENST00000449193 SALL2Q9Y467 1007 aaPredicted RBP23.78■■□□□ 1.4
SKIDA1-202ENST00000449193 DDX10Q13206 875 aaKnown RBP23.76■■□□□ 1.39
SKIDA1-202ENST00000449193 A0A0G2JS52 829 aa23.76■■□□□ 1.39
SKIDA1-202ENST00000449193 PPP1R15AO75807 674 aaPredicted RBP23.74■■□□□ 1.39
SKIDA1-202ENST00000449193 ACIN1Q9UKV3 1341 aaKnown RBP23.73■■□□□ 1.39
SKIDA1-202ENST00000449193 FKBP8Q14318 412 aa23.72■■□□□ 1.39
SKIDA1-202ENST00000449193 C14orf37Q86TY3 774 aa23.67■■□□□ 1.38
SKIDA1-202ENST00000449193 ZBTB7CA1YPR0 619 aa23.66■■□□□ 1.38
SKIDA1-202ENST00000449193 KCNH8Q96L42 1107 aa23.65■■□□□ 1.38
SKIDA1-202ENST00000449193 MYH16Q9H6N6 1097 aa23.65■■□□□ 1.38
SKIDA1-202ENST00000449193 PLEKHD1A6NEE1 506 aa23.63■■□□□ 1.37
SKIDA1-202ENST00000449193 CCDC136Q96JN2 1154 aa23.61■■□□□ 1.37
SKIDA1-202ENST00000449193 MRS2Q9HD23 443 aa23.6■■□□□ 1.37
SKIDA1-202ENST00000449193 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
SKIDA1-202ENST00000449193 ARID4BQ4LE39 1312 aaPredicted RBP23.57■■□□□ 1.36
SKIDA1-202ENST00000449193 PLEKHG5O94827 1062 aa23.56■■□□□ 1.36
SKIDA1-202ENST00000449193 HAP1P54257 671 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 854.9 ms