RNA–Protein interactions for RNA: ENST00000393053.6

TMPO-204, Transcript of thymopoietin, humanhuman

TSL 1 (best) BASIC

Gene TMPO, Length 2,374 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-204ENST00000393053 NISCHQ9Y2I1 1504 aa42.53■■■■■ 4.4
TMPO-204ENST00000393053 CCDC180Q9P1Z9 1646 aa36.2■■■■□ 3.39
TMPO-204ENST00000393053 SHROOM4Q9ULL8 1493 aa36.17■■■■□ 3.38
TMPO-204ENST00000393053 ZCCHC6Q5VYS8 1495 aaKnown RBP35.96■■■■□ 3.35
TMPO-204ENST00000393053 SUPT5HO00267 1087 aaKnown RBP35.39■■■■□ 3.26
TMPO-204ENST00000393053 DCAF8L2P0C7V8 631 aa35.24■■■■□ 3.23
TMPO-204ENST00000393053 DCAF1Q9Y4B6 1507 aa34.88■■■■□ 3.17
TMPO-204ENST00000393053 CHIC1Q5VXU3 224 aa34.38■■■■□ 3.09
TMPO-204ENST00000393053 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
TMPO-204ENST00000393053 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
TMPO-204ENST00000393053 ABCC9O60706 1549 aa33.91■■■■□ 3.02
TMPO-204ENST00000393053 RSF1Q96T23 1441 aaPredicted RBP33.62■■■□□ 2.97
TMPO-204ENST00000393053 NACADO15069 1562 aa33.48■■■□□ 2.95
TMPO-204ENST00000393053 LOC105371045A0A1W2PR82 267 aa33.37■■■□□ 2.93
TMPO-204ENST00000393053 RB1CC1Q8TDY2 1594 aa33.27■■■□□ 2.92
TMPO-204ENST00000393053 CECR2Q9BXF3 1484 aa33.22■■■□□ 2.91
TMPO-204ENST00000393053 PCGF6Q9BYE7 350 aa33.16■■■□□ 2.9
TMPO-204ENST00000393053 MROH2BQ7Z745 1585 aa33.09■■■□□ 2.89
TMPO-204ENST00000393053 HRCP23327 699 aa33.07■■■□□ 2.89
TMPO-204ENST00000393053 TRIM41Q8WV44 630 aa32.95■■■□□ 2.87
TMPO-204ENST00000393053 WIZO95785 1651 aa32.91■■■□□ 2.86
TMPO-204ENST00000393053 FAM9AQ8IZU1 332 aaPredicted RBP32.7■■■□□ 2.83
TMPO-204ENST00000393053 BAZ1AQ9NRL2 1556 aaPredicted RBP32.66■■■□□ 2.82
TMPO-204ENST00000393053 UNC13AQ9UPW8 1703 aa32.55■■■□□ 2.8
TMPO-204ENST00000393053 TRIM26Q12899 539 aaPredicted RBP32.54■■■□□ 2.8
TMPO-204ENST00000393053 PPARGC1BQ86YN6 1023 aaKnown RBP32.46■■■□□ 2.79
TMPO-204ENST00000393053 EHMT2Q96KQ7 1210 aa32.44■■■□□ 2.78
TMPO-204ENST00000393053 EIF4G1Q04637 1599 aaKnown RBP32.43■■■□□ 2.78
TMPO-204ENST00000393053 SMARCA4P51532 1647 aa32.42■■■□□ 2.78
TMPO-204ENST00000393053 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
TMPO-204ENST00000393053 CCDC88BA6NC98 1476 aa32.23■■■□□ 2.75
TMPO-204ENST00000393053 SMARCA2P51531 1590 aa32.2■■■□□ 2.74
TMPO-204ENST00000393053 PABPN1Q86U42 306 aaKnown RBP eCLIP32.16■■■□□ 2.74
TMPO-204ENST00000393053 BICRAQ9NZM4 1560 aa32.14■■■□□ 2.74
TMPO-204ENST00000393053 ABCC8Q09428 1581 aa32.13■■■□□ 2.73
TMPO-204ENST00000393053 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
TMPO-204ENST00000393053 SOGA1O94964 1423 aa31.8■■■□□ 2.68
TMPO-204ENST00000393053 ZEB1P37275 1124 aaPredicted RBP31.71■■■□□ 2.67
TMPO-204ENST00000393053 RUSC2Q8N2Y8 1516 aa31.67■■■□□ 2.66
TMPO-204ENST00000393053 ATAD2BQ9ULI0 1458 aa31.62■■■□□ 2.65
TMPO-204ENST00000393053 CEP162Q5TB80 1403 aa31.57■■■□□ 2.64
TMPO-204ENST00000393053 WRNQ14191 1432 aaPredicted RBP eCLIP31.56■■■□□ 2.64
TMPO-204ENST00000393053 CSRNP3Q8WYN3 585 aa31.56■■■□□ 2.64
TMPO-204ENST00000393053 EEA1Q15075 1411 aa31.54■■■□□ 2.64
TMPO-204ENST00000393053 TNIKQ9UKE5 1360 aa31.51■■■□□ 2.63
TMPO-204ENST00000393053 BAZ1BQ9UIG0 1483 aaKnown RBP31.5■■■□□ 2.63
TMPO-204ENST00000393053 SYNJ1O43426 1573 aa31.46■■■□□ 2.63
TMPO-204ENST00000393053 UBTFP17480 764 aaKnown RBP31.41■■■□□ 2.62
TMPO-204ENST00000393053 TTBK1Q5TCY1 1321 aaPredicted RBP31.36■■■□□ 2.61
TMPO-204ENST00000393053 GOLGA3Q08378 1498 aa31.35■■■□□ 2.61
TMPO-204ENST00000393053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.31■■■□□ 2.6
TMPO-204ENST00000393053 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
TMPO-204ENST00000393053 KIF21BO75037 1637 aa31.16■■■□□ 2.58
TMPO-204ENST00000393053 CCER1Q8TC90 406 aaPredicted RBP31.16■■■□□ 2.58
TMPO-204ENST00000393053 TOP2BQ02880 1626 aa31.06■■■□□ 2.56
TMPO-204ENST00000393053 RAPGEF2Q9Y4G8 1499 aa31.03■■■□□ 2.56
TMPO-204ENST00000393053 NCAPD3P42695 1498 aa31.01■■■□□ 2.55
TMPO-204ENST00000393053 CLIP1P30622 1438 aa30.99■■■□□ 2.55
TMPO-204ENST00000393053 HMGXB3Q12766 1538 aa30.99■■■□□ 2.55
TMPO-204ENST00000393053 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.54
TMPO-204ENST00000393053 VPS8Q8N3P4 1428 aa30.85■■■□□ 2.53
TMPO-204ENST00000393053 RANGAP1P46060 587 aaPredicted RBP30.84■■■□□ 2.53
TMPO-204ENST00000393053 CUX1P39880 1505 aa30.8■■■□□ 2.52
TMPO-204ENST00000393053 CFTRP13569 1480 aa30.74■■■□□ 2.51
TMPO-204ENST00000393053 PRXQ9BXM0 1461 aa30.72■■■□□ 2.51
TMPO-204ENST00000393053 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
TMPO-204ENST00000393053 HNRNPUL2Q1KMD3 747 aaKnown RBP30.65■■■□□ 2.5
TMPO-204ENST00000393053 APLP2Q06481 763 aa30.62■■■□□ 2.49
TMPO-204ENST00000393053 KIF27Q86VH2 1401 aa30.58■■■□□ 2.49
TMPO-204ENST00000393053 ARAP1Q96P48 1450 aa30.55■■■□□ 2.48
TMPO-204ENST00000393053 DIEXFQ68CQ4 756 aaKnown RBP30.49■■■□□ 2.47
TMPO-204ENST00000393053 PRDM2Q13029 1718 aa30.47■■■□□ 2.47
TMPO-204ENST00000393053 SCAF1Q9H7N4 1312 aaKnown RBP30.41■■■□□ 2.46
TMPO-204ENST00000393053 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
TMPO-204ENST00000393053 KANK4Q5T7N3 995 aaPredicted RBP30.37■■■□□ 2.45
TMPO-204ENST00000393053 CUX2O14529 1486 aa30.33■■■□□ 2.45
TMPO-204ENST00000393053 ARHGAP35Q9NRY4 1499 aa30.31■■■□□ 2.44
TMPO-204ENST00000393053 CC2D2AQ9P2K1 1620 aa30.31■■■□□ 2.44
TMPO-204ENST00000393053 ZNF316A6NFI3 1004 aaPredicted RBP30.3■■■□□ 2.44
TMPO-204ENST00000393053 IGF1RP08069 1367 aa30.3■■■□□ 2.44
TMPO-204ENST00000393053 FGD5Q6ZNL6 1462 aa30.26■■■□□ 2.43
TMPO-204ENST00000393053 NEUROD1Q13562 356 aa30.15■■■□□ 2.42
TMPO-204ENST00000393053 ACIN1Q9UKV3 1341 aaKnown RBP30.14■■■□□ 2.42
TMPO-204ENST00000393053 CARMIL1Q5VZK9 1371 aa30.14■■■□□ 2.42
TMPO-204ENST00000393053 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
TMPO-204ENST00000393053 RRBP1Q9P2E9 1410 aaKnown RBP30.12■■■□□ 2.41
TMPO-204ENST00000393053 DHX57Q6P158 1386 aaKnown RBP30.07■■■□□ 2.4
TMPO-204ENST00000393053 NESP48681 1621 aa29.99■■■□□ 2.39
TMPO-204ENST00000393053 CCNB3Q8WWL7 1395 aa29.99■■■□□ 2.39
TMPO-204ENST00000393053 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
TMPO-204ENST00000393053 DNMBPQ6XZF7 1577 aa29.95■■■□□ 2.39
TMPO-204ENST00000393053 CLSPNQ9HAW4 1339 aa29.94■■■□□ 2.38
TMPO-204ENST00000393053 TIAM1Q13009 1591 aa29.93■■■□□ 2.38
TMPO-204ENST00000393053 TOPBP1Q92547 1522 aa29.92■■■□□ 2.38
TMPO-204ENST00000393053 CENPBP07199 599 aaPredicted RBP29.92■■■□□ 2.38
TMPO-204ENST00000393053 POLA1P09884 1462 aaPredicted RBP29.92■■■□□ 2.38
TMPO-204ENST00000393053 ITGAEP38570 1179 aa29.89■■■□□ 2.38
TMPO-204ENST00000393053 MIER1Q8N108 512 aa29.89■■■□□ 2.38
TMPO-204ENST00000393053 ABCA10Q8WWZ4 1543 aa29.89■■■□□ 2.38
TMPO-204ENST00000393053 MAP3K1Q13233 1512 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms