RNA–Protein interactions for RNA: ENST00000331483.8

P4HB-201, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene P4HB, Length 2,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-201ENST00000331483 NISCHQ9Y2I1 1504 aa43.64■■■■■ 4.58
P4HB-201ENST00000331483 CCDC180Q9P1Z9 1646 aa37.37■■■■□ 3.57
P4HB-201ENST00000331483 SHROOM4Q9ULL8 1493 aa36.82■■■■□ 3.48
P4HB-201ENST00000331483 ZCCHC6Q5VYS8 1495 aaKnown RBP36.76■■■■□ 3.47
P4HB-201ENST00000331483 DCAF8L2P0C7V8 631 aa36.56■■■■□ 3.44
P4HB-201ENST00000331483 SUPT5HO00267 1087 aaKnown RBP35.75■■■■□ 3.31
P4HB-201ENST00000331483 DCAF1Q9Y4B6 1507 aa35.74■■■■□ 3.31
P4HB-201ENST00000331483 ABCC9O60706 1549 aa35.41■■■■□ 3.26
P4HB-201ENST00000331483 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
P4HB-201ENST00000331483 MYO15BQ96JP2 1530 aa34.96■■■■□ 3.19
P4HB-201ENST00000331483 NACADO15069 1562 aa34.76■■■■□ 3.15
P4HB-201ENST00000331483 RB1CC1Q8TDY2 1594 aa34.37■■■■□ 3.09
P4HB-201ENST00000331483 CHIC1Q5VXU3 224 aa34.34■■■■□ 3.09
P4HB-201ENST00000331483 RSF1Q96T23 1441 aaPredicted RBP34.28■■■■□ 3.08
P4HB-201ENST00000331483 CECR2Q9BXF3 1484 aa34.16■■■■□ 3.06
P4HB-201ENST00000331483 MROH2BQ7Z745 1585 aa33.93■■■■□ 3.02
P4HB-201ENST00000331483 UNC13AQ9UPW8 1703 aa33.83■■■■□ 3.01
P4HB-201ENST00000331483 PABPN1Q86U42 306 aaKnown RBP eCLIP33.76■■■□□ 2.99
P4HB-201ENST00000331483 WIZO95785 1651 aa33.7■■■□□ 2.99
P4HB-201ENST00000331483 BAZ1AQ9NRL2 1556 aaPredicted RBP33.56■■■□□ 2.96
P4HB-201ENST00000331483 BICRAQ9NZM4 1560 aa33.48■■■□□ 2.95
P4HB-201ENST00000331483 SMARCA4P51532 1647 aa33.38■■■□□ 2.93
P4HB-201ENST00000331483 LOC105371045A0A1W2PR82 267 aa33.36■■■□□ 2.93
P4HB-201ENST00000331483 TRIM41Q8WV44 630 aa33.31■■■□□ 2.92
P4HB-201ENST00000331483 TOP2AP11388 1531 aaKnown RBP33.12■■■□□ 2.89
P4HB-201ENST00000331483 FAM9AQ8IZU1 332 aaPredicted RBP33.09■■■□□ 2.89
P4HB-201ENST00000331483 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.88
P4HB-201ENST00000331483 SMARCA2P51531 1590 aa32.94■■■□□ 2.86
P4HB-201ENST00000331483 EHMT2Q96KQ7 1210 aa32.89■■■□□ 2.86
P4HB-201ENST00000331483 EIF4G1Q04637 1599 aaKnown RBP32.86■■■□□ 2.85
P4HB-201ENST00000331483 ATAD2BQ9ULI0 1458 aa32.73■■■□□ 2.83
P4HB-201ENST00000331483 PEG3Q9GZU2 1588 aa32.73■■■□□ 2.83
P4HB-201ENST00000331483 ABCC8Q09428 1581 aa32.72■■■□□ 2.83
P4HB-201ENST00000331483 BAZ1BQ9UIG0 1483 aaKnown RBP32.61■■■□□ 2.81
P4HB-201ENST00000331483 PCGF6Q9BYE7 350 aa32.56■■■□□ 2.8
P4HB-201ENST00000331483 SOGA1O94964 1423 aa32.28■■■□□ 2.76
P4HB-201ENST00000331483 WRNQ14191 1432 aaPredicted RBP eCLIP32.23■■■□□ 2.75
P4HB-201ENST00000331483 NCAPD3P42695 1498 aa32.19■■■□□ 2.74
P4HB-201ENST00000331483 RUSC2Q8N2Y8 1516 aa32.17■■■□□ 2.74
P4HB-201ENST00000331483 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
P4HB-201ENST00000331483 SYNJ1O43426 1573 aa32.1■■■□□ 2.73
P4HB-201ENST00000331483 TRIM26Q12899 539 aaPredicted RBP32.03■■■□□ 2.72
P4HB-201ENST00000331483 CSRNP3Q8WYN3 585 aa32■■■□□ 2.71
P4HB-201ENST00000331483 HRCP23327 699 aa31.96■■■□□ 2.71
P4HB-201ENST00000331483 PPARGC1BQ86YN6 1023 aaKnown RBP31.96■■■□□ 2.71
P4HB-201ENST00000331483 EEA1Q15075 1411 aa31.86■■■□□ 2.69
P4HB-201ENST00000331483 UBTFP17480 764 aaKnown RBP31.86■■■□□ 2.69
P4HB-201ENST00000331483 CC2D2AQ9P2K1 1620 aa31.82■■■□□ 2.68
P4HB-201ENST00000331483 CFTRP13569 1480 aa31.75■■■□□ 2.67
P4HB-201ENST00000331483 CEP162Q5TB80 1403 aa31.74■■■□□ 2.67
P4HB-201ENST00000331483 TOP2BQ02880 1626 aa31.72■■■□□ 2.67
P4HB-201ENST00000331483 TNIKQ9UKE5 1360 aa31.71■■■□□ 2.67
P4HB-201ENST00000331483 GOLGA3Q08378 1498 aa31.67■■■□□ 2.66
P4HB-201ENST00000331483 CUX1P39880 1505 aa31.63■■■□□ 2.65
P4HB-201ENST00000331483 TTBK1Q5TCY1 1321 aaPredicted RBP31.61■■■□□ 2.65
P4HB-201ENST00000331483 BIVM-ERCC5R4GMW8 1640 aa31.59■■■□□ 2.65
P4HB-201ENST00000331483 CADPSQ9ULU8 1353 aa31.56■■■□□ 2.64
P4HB-201ENST00000331483 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
P4HB-201ENST00000331483 RANGAP1P46060 587 aaPredicted RBP31.52■■■□□ 2.64
P4HB-201ENST00000331483 RAPGEF2Q9Y4G8 1499 aa31.51■■■□□ 2.63
P4HB-201ENST00000331483 KIF21BO75037 1637 aa31.48■■■□□ 2.63
P4HB-201ENST00000331483 DNAJC5BQ9UF47 199 aa31.38■■■□□ 2.61
P4HB-201ENST00000331483 PRDM2Q13029 1718 aa31.35■■■□□ 2.61
P4HB-201ENST00000331483 NESP48681 1621 aa31.33■■■□□ 2.61
P4HB-201ENST00000331483 CLIP1P30622 1438 aa31.32■■■□□ 2.6
P4HB-201ENST00000331483 KIF27Q86VH2 1401 aa31.29■■■□□ 2.6
P4HB-201ENST00000331483 FANCD2Q9BXW9 1451 aa31.26■■■□□ 2.59
P4HB-201ENST00000331483 PRXQ9BXM0 1461 aa31.23■■■□□ 2.59
P4HB-201ENST00000331483 FGD5Q6ZNL6 1462 aa31.19■■■□□ 2.58
P4HB-201ENST00000331483 CUX2O14529 1486 aa31.18■■■□□ 2.58
P4HB-201ENST00000331483 ERICH3Q5RHP9 1530 aa31.1■■■□□ 2.57
P4HB-201ENST00000331483 VPS8Q8N3P4 1428 aa31.05■■■□□ 2.56
P4HB-201ENST00000331483 IGF1RP08069 1367 aa31.04■■■□□ 2.56
P4HB-201ENST00000331483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.02■■■□□ 2.56
P4HB-201ENST00000331483 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.55
P4HB-201ENST00000331483 TOPBP1Q92547 1522 aa30.97■■■□□ 2.55
P4HB-201ENST00000331483 DNMBPQ6XZF7 1577 aa30.94■■■□□ 2.54
P4HB-201ENST00000331483 APLP2Q06481 763 aa30.93■■■□□ 2.54
P4HB-201ENST00000331483 POLA1P09884 1462 aaPredicted RBP30.92■■■□□ 2.54
P4HB-201ENST00000331483 LAMC3Q9Y6N6 1575 aa30.91■■■□□ 2.54
P4HB-201ENST00000331483 ZEB1P37275 1124 aaPredicted RBP30.91■■■□□ 2.54
P4HB-201ENST00000331483 CARMIL1Q5VZK9 1371 aa30.9■■■□□ 2.54
P4HB-201ENST00000331483 ARAP1Q96P48 1450 aa30.88■■■□□ 2.53
P4HB-201ENST00000331483 URB2Q14146 1524 aaKnown RBP30.85■■■□□ 2.53
P4HB-201ENST00000331483 CCER1Q8TC90 406 aaPredicted RBP30.83■■■□□ 2.53
P4HB-201ENST00000331483 PDS5BQ9NTI5 1447 aa30.78■■■□□ 2.52
P4HB-201ENST00000331483 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.51
P4HB-201ENST00000331483 ARHGAP35Q9NRY4 1499 aa30.75■■■□□ 2.51
P4HB-201ENST00000331483 HNRNPUL2Q1KMD3 747 aaKnown RBP30.74■■■□□ 2.51
P4HB-201ENST00000331483 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
P4HB-201ENST00000331483 TDRD9Q8NDG6 1382 aaKnown RBP30.7■■■□□ 2.5
P4HB-201ENST00000331483 KANK4Q5T7N3 995 aaPredicted RBP30.7■■■□□ 2.5
P4HB-201ENST00000331483 P3H3Q8IVL6 736 aa30.64■■■□□ 2.5
P4HB-201ENST00000331483 WDR97A6NE52 1622 aa30.51■■■□□ 2.47
P4HB-201ENST00000331483 GAPVD1Q14C86 1478 aa30.48■■■□□ 2.47
P4HB-201ENST00000331483 ATP1B4Q9UN42 357 aaPredicted RBP30.44■■■□□ 2.46
P4HB-201ENST00000331483 ABCA5Q8WWZ7 1642 aa30.43■■■□□ 2.46
P4HB-201ENST00000331483 CUL7Q14999 1698 aa30.42■■■□□ 2.46
P4HB-201ENST00000331483 FHOD3Q2V2M9 1422 aa30.4■■■□□ 2.46
P4HB-201ENST00000331483 TARBP1Q13395 1621 aaKnown RBP30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms