RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 NISCHQ9Y2I1 1504 aa45.4■■■■■ 4.86
RIPPLY3-201ENST00000329553 CCDC180Q9P1Z9 1646 aa39.39■■■■□ 3.9
RIPPLY3-201ENST00000329553 ZCCHC6Q5VYS8 1495 aaKnown RBP38.15■■■■□ 3.7
RIPPLY3-201ENST00000329553 DCAF8L2P0C7V8 631 aa37.63■■■■□ 3.61
RIPPLY3-201ENST00000329553 DCAF1Q9Y4B6 1507 aa37.46■■■■□ 3.59
RIPPLY3-201ENST00000329553 SHROOM4Q9ULL8 1493 aa37.32■■■■□ 3.56
RIPPLY3-201ENST00000329553 ABCC9O60706 1549 aa37.26■■■■□ 3.56
RIPPLY3-201ENST00000329553 MYO15BQ96JP2 1530 aa36.92■■■■□ 3.5
RIPPLY3-201ENST00000329553 NACADO15069 1562 aa36.69■■■■□ 3.46
RIPPLY3-201ENST00000329553 SCRIBQ14160 1630 aa36.38■■■■□ 3.41
RIPPLY3-201ENST00000329553 RB1CC1Q8TDY2 1594 aa36.34■■■■□ 3.41
RIPPLY3-201ENST00000329553 SUPT5HO00267 1087 aaKnown RBP36.01■■■■□ 3.36
RIPPLY3-201ENST00000329553 UNC13AQ9UPW8 1703 aa35.67■■■■□ 3.3
RIPPLY3-201ENST00000329553 CECR2Q9BXF3 1484 aa35.35■■■■□ 3.25
RIPPLY3-201ENST00000329553 RSF1Q96T23 1441 aaPredicted RBP35.34■■■■□ 3.25
RIPPLY3-201ENST00000329553 BICRAQ9NZM4 1560 aa35.31■■■■□ 3.24
RIPPLY3-201ENST00000329553 PABPN1Q86U42 306 aaKnown RBP eCLIP35.26■■■■□ 3.24
RIPPLY3-201ENST00000329553 MROH2BQ7Z745 1585 aa35.13■■■■□ 3.21
RIPPLY3-201ENST00000329553 BAZ1AQ9NRL2 1556 aaPredicted RBP35■■■■□ 3.19
RIPPLY3-201ENST00000329553 WIZO95785 1651 aa34.85■■■■□ 3.17
RIPPLY3-201ENST00000329553 SMARCA4P51532 1647 aa34.84■■■■□ 3.17
RIPPLY3-201ENST00000329553 CHIC1Q5VXU3 224 aa34.54■■■■□ 3.12
RIPPLY3-201ENST00000329553 TOP2AP11388 1531 aaKnown RBP34.41■■■■□ 3.1
RIPPLY3-201ENST00000329553 PEG3Q9GZU2 1588 aa34.36■■■■□ 3.09
RIPPLY3-201ENST00000329553 ATAD2BQ9ULI0 1458 aa34.26■■■■□ 3.08
RIPPLY3-201ENST00000329553 EIF4G1Q04637 1599 aaKnown RBP34.21■■■■□ 3.07
RIPPLY3-201ENST00000329553 SMARCA2P51531 1590 aa34.18■■■■□ 3.06
RIPPLY3-201ENST00000329553 CCDC88BA6NC98 1476 aa34.15■■■■□ 3.06
RIPPLY3-201ENST00000329553 BAZ1BQ9UIG0 1483 aaKnown RBP34.06■■■■□ 3.04
RIPPLY3-201ENST00000329553 NCAPD3P42695 1498 aa33.92■■■■□ 3.02
RIPPLY3-201ENST00000329553 HMGXB3Q12766 1538 aa33.82■■■■□ 3.01
RIPPLY3-201ENST00000329553 TRIM41Q8WV44 630 aa33.79■■■■□ 3
RIPPLY3-201ENST00000329553 CC2D2AQ9P2K1 1620 aa33.68■■■□□ 2.98
RIPPLY3-201ENST00000329553 ABCC8Q09428 1581 aa33.51■■■□□ 2.95
RIPPLY3-201ENST00000329553 LOC105371045A0A1W2PR82 267 aa33.3■■■□□ 2.92
RIPPLY3-201ENST00000329553 FAM9AQ8IZU1 332 aaPredicted RBP33.26■■■□□ 2.91
RIPPLY3-201ENST00000329553 WRNQ14191 1432 aaPredicted RBP eCLIP33.23■■■□□ 2.91
RIPPLY3-201ENST00000329553 CFTRP13569 1480 aa33.22■■■□□ 2.91
RIPPLY3-201ENST00000329553 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
RIPPLY3-201ENST00000329553 SYNJ1O43426 1573 aa33.09■■■□□ 2.89
RIPPLY3-201ENST00000329553 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
RIPPLY3-201ENST00000329553 PRDM2Q13029 1718 aa32.96■■■□□ 2.87
RIPPLY3-201ENST00000329553 SOGA1O94964 1423 aa32.95■■■□□ 2.86
RIPPLY3-201ENST00000329553 TOP2BQ02880 1626 aa32.9■■■□□ 2.86
RIPPLY3-201ENST00000329553 EHMT2Q96KQ7 1210 aa32.84■■■□□ 2.85
RIPPLY3-201ENST00000329553 BIVM-ERCC5R4GMW8 1640 aa32.84■■■□□ 2.85
RIPPLY3-201ENST00000329553 RUSC2Q8N2Y8 1516 aa32.84■■■□□ 2.85
RIPPLY3-201ENST00000329553 CUX1P39880 1505 aa32.82■■■□□ 2.84
RIPPLY3-201ENST00000329553 NESP48681 1621 aa32.79■■■□□ 2.84
RIPPLY3-201ENST00000329553 EEA1Q15075 1411 aa32.78■■■□□ 2.84
RIPPLY3-201ENST00000329553 FANCD2Q9BXW9 1451 aa32.72■■■□□ 2.83
RIPPLY3-201ENST00000329553 CSRNP3Q8WYN3 585 aa32.71■■■□□ 2.83
RIPPLY3-201ENST00000329553 LAMC3Q9Y6N6 1575 aa32.69■■■□□ 2.82
RIPPLY3-201ENST00000329553 PDS5BQ9NTI5 1447 aa32.47■■■□□ 2.79
RIPPLY3-201ENST00000329553 CEP164Q9UPV0 1460 aa32.46■■■□□ 2.79
RIPPLY3-201ENST00000329553 FGD5Q6ZNL6 1462 aa32.42■■■□□ 2.78
RIPPLY3-201ENST00000329553 DNMBPQ6XZF7 1577 aa32.41■■■□□ 2.78
RIPPLY3-201ENST00000329553 GOLGA3Q08378 1498 aa32.38■■■□□ 2.77
RIPPLY3-201ENST00000329553 TOPBP1Q92547 1522 aa32.38■■■□□ 2.77
RIPPLY3-201ENST00000329553 KIF27Q86VH2 1401 aa32.36■■■□□ 2.77
RIPPLY3-201ENST00000329553 KIF21BO75037 1637 aa32.36■■■□□ 2.77
RIPPLY3-201ENST00000329553 TNIKQ9UKE5 1360 aa32.35■■■□□ 2.77
RIPPLY3-201ENST00000329553 UBTFP17480 764 aaKnown RBP32.34■■■□□ 2.77
RIPPLY3-201ENST00000329553 KIF21AQ7Z4S6 1674 aa32.32■■■□□ 2.76
RIPPLY3-201ENST00000329553 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
RIPPLY3-201ENST00000329553 CUX2O14529 1486 aa32.27■■■□□ 2.76
RIPPLY3-201ENST00000329553 POLA1P09884 1462 aaPredicted RBP32.25■■■□□ 2.75
RIPPLY3-201ENST00000329553 RAPGEF2Q9Y4G8 1499 aa32.24■■■□□ 2.75
RIPPLY3-201ENST00000329553 CEP162Q5TB80 1403 aa32.2■■■□□ 2.74
RIPPLY3-201ENST00000329553 PRXQ9BXM0 1461 aa32.2■■■□□ 2.74
RIPPLY3-201ENST00000329553 RAD54L2Q9Y4B4 1467 aa32.2■■■□□ 2.74
RIPPLY3-201ENST00000329553 IGF1RP08069 1367 aa32.12■■■□□ 2.73
RIPPLY3-201ENST00000329553 ABCA10Q8WWZ4 1543 aa32.11■■■□□ 2.73
RIPPLY3-201ENST00000329553 ERICH3Q5RHP9 1530 aa32.1■■■□□ 2.73
RIPPLY3-201ENST00000329553 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
RIPPLY3-201ENST00000329553 HRCP23327 699 aa32■■■□□ 2.71
RIPPLY3-201ENST00000329553 WDR97A6NE52 1622 aa31.95■■■□□ 2.71
RIPPLY3-201ENST00000329553 CARMIL1Q5VZK9 1371 aa31.95■■■□□ 2.7
RIPPLY3-201ENST00000329553 PCGF6Q9BYE7 350 aa31.93■■■□□ 2.7
RIPPLY3-201ENST00000329553 CLIP1P30622 1438 aa31.91■■■□□ 2.7
RIPPLY3-201ENST00000329553 ERCC6Q03468 1493 aa31.88■■■□□ 2.69
RIPPLY3-201ENST00000329553 TDRD9Q8NDG6 1382 aaKnown RBP31.88■■■□□ 2.69
RIPPLY3-201ENST00000329553 TARBP1Q13395 1621 aaKnown RBP31.86■■■□□ 2.69
RIPPLY3-201ENST00000329553 RANGAP1P46060 587 aaPredicted RBP31.84■■■□□ 2.69
RIPPLY3-201ENST00000329553 WDR62O43379 1518 aa31.84■■■□□ 2.69
RIPPLY3-201ENST00000329553 TRIM26Q12899 539 aaPredicted RBP31.81■■■□□ 2.68
RIPPLY3-201ENST00000329553 ABCA5Q8WWZ7 1642 aa31.81■■■□□ 2.68
RIPPLY3-201ENST00000329553 GAPVD1Q14C86 1478 aa31.79■■■□□ 2.68
RIPPLY3-201ENST00000329553 PPARGC1BQ86YN6 1023 aaKnown RBP31.75■■■□□ 2.67
RIPPLY3-201ENST00000329553 CUL7Q14999 1698 aa31.72■■■□□ 2.67
RIPPLY3-201ENST00000329553 THOC2Q8NI27 1593 aaKnown RBP31.71■■■□□ 2.67
RIPPLY3-201ENST00000329553 IFT140Q96RY7 1462 aa31.67■■■□□ 2.66
RIPPLY3-201ENST00000329553 AQRO60306 1485 aaKnown RBP eCLIP31.64■■■□□ 2.66
RIPPLY3-201ENST00000329553 VPS8Q8N3P4 1428 aa31.63■■■□□ 2.65
RIPPLY3-201ENST00000329553 ARAP1Q96P48 1450 aa31.57■■■□□ 2.64
RIPPLY3-201ENST00000329553 ZNF608Q9ULD9 1512 aaPredicted RBP31.57■■■□□ 2.64
RIPPLY3-201ENST00000329553 PBRM1Q86U86 1689 aa31.54■■■□□ 2.64
RIPPLY3-201ENST00000329553 ARHGAP35Q9NRY4 1499 aa31.54■■■□□ 2.64
RIPPLY3-201ENST00000329553 GRIN2BQ13224 1484 aa31.49■■■□□ 2.63
RIPPLY3-201ENST00000329553 TTBK1Q5TCY1 1321 aaPredicted RBP31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms