RNA–Protein interactions for RNA: ENST00000232496.4

TUSC2-201, Transcript of tumor suppressor 2, mitochondrial calcium regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUSC2, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC2-201ENST00000232496 NISCHQ9Y2I1 1504 aa48.9■■■■■ 5.42
TUSC2-201ENST00000232496 CCDC180Q9P1Z9 1646 aa43.27■■■■■ 4.52
TUSC2-201ENST00000232496 ABCC9O60706 1549 aa41.67■■■■■ 4.26
TUSC2-201ENST00000232496 ZCCHC6Q5VYS8 1495 aaKnown RBP40.85■■■■■ 4.13
TUSC2-201ENST00000232496 DCAF8L2P0C7V8 631 aa40.52■■■■■ 4.08
TUSC2-201ENST00000232496 DCAF1Q9Y4B6 1507 aa40.51■■■■■ 4.08
TUSC2-201ENST00000232496 NACADO15069 1562 aa40.5■■■■■ 4.07
TUSC2-201ENST00000232496 MYO15BQ96JP2 1530 aa40.46■■■■■ 4.07
TUSC2-201ENST00000232496 RB1CC1Q8TDY2 1594 aa40.39■■■■■ 4.06
TUSC2-201ENST00000232496 UNC13AQ9UPW8 1703 aa39.63■■■■□ 3.93
TUSC2-201ENST00000232496 SCRIBQ14160 1630 aa39.46■■■■□ 3.91
TUSC2-201ENST00000232496 BICRAQ9NZM4 1560 aa39.18■■■■□ 3.86
TUSC2-201ENST00000232496 PABPN1Q86U42 306 aaKnown RBP eCLIP39.01■■■■□ 3.84
TUSC2-201ENST00000232496 SHROOM4Q9ULL8 1493 aa38.9■■■■□ 3.82
TUSC2-201ENST00000232496 EIF4G1Q04637 1599 aaKnown RBP38.08■■■■□ 3.69
TUSC2-201ENST00000232496 CECR2Q9BXF3 1484 aa38.01■■■■□ 3.68
TUSC2-201ENST00000232496 BAZ1AQ9NRL2 1556 aaPredicted RBP37.85■■■■□ 3.65
TUSC2-201ENST00000232496 SMARCA4P51532 1647 aa37.84■■■■□ 3.65
TUSC2-201ENST00000232496 CC2D2AQ9P2K1 1620 aa37.78■■■■□ 3.64
TUSC2-201ENST00000232496 DNAJC5BQ9UF47 199 aa37.72■■■■□ 3.63
TUSC2-201ENST00000232496 MROH2BQ7Z745 1585 aa37.69■■■■□ 3.62
TUSC2-201ENST00000232496 PEG3Q9GZU2 1588 aa37.48■■■■□ 3.59
TUSC2-201ENST00000232496 RSF1Q96T23 1441 aaPredicted RBP37.47■■■■□ 3.59
TUSC2-201ENST00000232496 SMARCA2P51531 1590 aa37.44■■■■□ 3.58
TUSC2-201ENST00000232496 ATAD2BQ9ULI0 1458 aa37.44■■■■□ 3.58
TUSC2-201ENST00000232496 WIZO95785 1651 aa37.36■■■■□ 3.57
TUSC2-201ENST00000232496 NCAPD3P42695 1498 aa37.35■■■■□ 3.57
TUSC2-201ENST00000232496 HMGXB3Q12766 1538 aa37.23■■■■□ 3.55
TUSC2-201ENST00000232496 BAZ1BQ9UIG0 1483 aaKnown RBP37.16■■■■□ 3.54
TUSC2-201ENST00000232496 TOP2AP11388 1531 aaKnown RBP36.95■■■■□ 3.51
TUSC2-201ENST00000232496 SUPT5HO00267 1087 aaKnown RBP36.9■■■■□ 3.5
TUSC2-201ENST00000232496 CCDC88BA6NC98 1476 aa36.51■■■■□ 3.44
TUSC2-201ENST00000232496 LAMC3Q9Y6N6 1575 aa36.29■■■■□ 3.4
TUSC2-201ENST00000232496 NESP48681 1621 aa36.26■■■■□ 3.39
TUSC2-201ENST00000232496 CADPSQ9ULU8 1353 aa36.26■■■■□ 3.39
TUSC2-201ENST00000232496 CFTRP13569 1480 aa36.2■■■■□ 3.38
TUSC2-201ENST00000232496 PRDM2Q13029 1718 aa36.1■■■■□ 3.37
TUSC2-201ENST00000232496 PDS5BQ9NTI5 1447 aa35.97■■■■□ 3.35
TUSC2-201ENST00000232496 KIF21AQ7Z4S6 1674 aa35.92■■■■□ 3.34
TUSC2-201ENST00000232496 FANCD2Q9BXW9 1451 aa35.85■■■■□ 3.33
TUSC2-201ENST00000232496 ERCC6Q03468 1493 aa35.84■■■■□ 3.33
TUSC2-201ENST00000232496 CEP164Q9UPV0 1460 aa35.75■■■■□ 3.31
TUSC2-201ENST00000232496 THOC2Q8NI27 1593 aaKnown RBP35.62■■■■□ 3.29
TUSC2-201ENST00000232496 MRC2Q9UBG0 1479 aa35.57■■■■□ 3.28
TUSC2-201ENST00000232496 URB2Q14146 1524 aaKnown RBP35.47■■■■□ 3.27
TUSC2-201ENST00000232496 WDR62O43379 1518 aa35.47■■■■□ 3.27
TUSC2-201ENST00000232496 ABCC8Q09428 1581 aa35.39■■■■□ 3.26
TUSC2-201ENST00000232496 DNMBPQ6XZF7 1577 aa35.38■■■■□ 3.25
TUSC2-201ENST00000232496 TOPBP1Q92547 1522 aa35.36■■■■□ 3.25
TUSC2-201ENST00000232496 CUX1P39880 1505 aa35.33■■■■□ 3.25
TUSC2-201ENST00000232496 WRNQ14191 1432 aaPredicted RBP eCLIP35.29■■■■□ 3.24
TUSC2-201ENST00000232496 CUX2O14529 1486 aa35.28■■■■□ 3.24
TUSC2-201ENST00000232496 BIVM-ERCC5R4GMW8 1640 aa35.22■■■■□ 3.23
TUSC2-201ENST00000232496 SYNJ1O43426 1573 aa35.22■■■■□ 3.23
TUSC2-201ENST00000232496 TOP2BQ02880 1626 aa35.21■■■■□ 3.23
TUSC2-201ENST00000232496 POLA1P09884 1462 aaPredicted RBP35.1■■■■□ 3.21
TUSC2-201ENST00000232496 FGD5Q6ZNL6 1462 aa35.09■■■■□ 3.21
TUSC2-201ENST00000232496 TARBP1Q13395 1621 aaKnown RBP34.98■■■■□ 3.19
TUSC2-201ENST00000232496 IFT140Q96RY7 1462 aa34.97■■■■□ 3.19
TUSC2-201ENST00000232496 SOGA1O94964 1423 aa34.94■■■■□ 3.18
TUSC2-201ENST00000232496 RAD54L2Q9Y4B4 1467 aa34.92■■■■□ 3.18
TUSC2-201ENST00000232496 WDR97A6NE52 1622 aa34.86■■■■□ 3.17
TUSC2-201ENST00000232496 TRIM41Q8WV44 630 aa34.84■■■■□ 3.17
TUSC2-201ENST00000232496 CHIC1Q5VXU3 224 aa34.82■■■■□ 3.16
TUSC2-201ENST00000232496 ABCA10Q8WWZ4 1543 aa34.79■■■■□ 3.16
TUSC2-201ENST00000232496 ZNF608Q9ULD9 1512 aaPredicted RBP34.77■■■■□ 3.16
TUSC2-201ENST00000232496 EIF4G3O43432 1585 aaKnown RBP34.7■■■■□ 3.15
TUSC2-201ENST00000232496 TDRD9Q8NDG6 1382 aaKnown RBP34.66■■■■□ 3.14
TUSC2-201ENST00000232496 AQRO60306 1485 aaKnown RBP eCLIP34.64■■■■□ 3.141e-7■■■■■ 32.3
TUSC2-201ENST00000232496 ABCA5Q8WWZ7 1642 aa34.64■■■■□ 3.14
TUSC2-201ENST00000232496 GAPVD1Q14C86 1478 aa34.56■■■■□ 3.12
TUSC2-201ENST00000232496 PBRM1Q86U86 1689 aa34.53■■■■□ 3.12
TUSC2-201ENST00000232496 KIF27Q86VH2 1401 aa34.5■■■■□ 3.11
TUSC2-201ENST00000232496 GRIN2BQ13224 1484 aa34.47■■■■□ 3.11
TUSC2-201ENST00000232496 RUSC2Q8N2Y8 1516 aa34.4■■■■□ 3.1
TUSC2-201ENST00000232496 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
TUSC2-201ENST00000232496 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
TUSC2-201ENST00000232496 MAGI1Q96QZ7 1491 aaPredicted RBP34.33■■■■□ 3.09
TUSC2-201ENST00000232496 IGF1RP08069 1367 aa34.3■■■■□ 3.08
TUSC2-201ENST00000232496 ADAMTS12P58397 1594 aa34.24■■■■□ 3.07
TUSC2-201ENST00000232496 EEA1Q15075 1411 aa34.24■■■■□ 3.07
TUSC2-201ENST00000232496 CUL7Q14999 1698 aa34.23■■■■□ 3.07
TUSC2-201ENST00000232496 CHD1O14646 1710 aa34.2■■■■□ 3.06
TUSC2-201ENST00000232496 SYNJ2O15056 1496 aa34.18■■■■□ 3.06
TUSC2-201ENST00000232496 FHAD1B1AJZ9 1412 aa34.17■■■■□ 3.06
TUSC2-201ENST00000232496 CSRNP3Q8WYN3 585 aa34.09■■■■□ 3.05
TUSC2-201ENST00000232496 CARMIL1Q5VZK9 1371 aa34.09■■■■□ 3.05
TUSC2-201ENST00000232496 CHMP7Q8WUX9 453 aaPredicted RBP34.08■■■■□ 3.05
TUSC2-201ENST00000232496 FAM9AQ8IZU1 332 aaPredicted RBP34.07■■■■□ 3.04
TUSC2-201ENST00000232496 FBLN2P98095 1184 aa34.06■■■■□ 3.04
TUSC2-201ENST00000232496 GRIN2AQ12879 1464 aa34.04■■■■□ 3.04
TUSC2-201ENST00000232496 PRXQ9BXM0 1461 aa34.02■■■■□ 3.04
TUSC2-201ENST00000232496 RAPGEF2Q9Y4G8 1499 aa33.97■■■■□ 3.03
TUSC2-201ENST00000232496 OSCARQ8IYS5 282 aa33.91■■■■□ 3.02
TUSC2-201ENST00000232496 KIF21BO75037 1637 aa33.89■■■■□ 3.02
TUSC2-201ENST00000232496 CEP170Q5SW79 1584 aa33.87■■■■□ 3.01
TUSC2-201ENST00000232496 NUP160Q12769 1436 aa33.86■■■■□ 3.01
TUSC2-201ENST00000232496 CLASP1Q7Z460 1538 aa33.78■■■■□ 3
TUSC2-201ENST00000232496 CTTNBP2Q8WZ74 1663 aa33.72■■■□□ 2.99
TUSC2-201ENST00000232496 KIAA0586Q9BVV6 1533 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms