RNA–Protein interactions for RNA: ENST00000403532.7

XBP1-203, Transcript of X-box binding protein 1, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene XBP1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XBP1-203ENST00000403532 NISCHQ9Y2I1 1504 aa45.08■■■■■ 4.81
XBP1-203ENST00000403532 CCDC180Q9P1Z9 1646 aa39.11■■■■□ 3.85
XBP1-203ENST00000403532 ZCCHC6Q5VYS8 1495 aaKnown RBP37.94■■■■□ 3.66
XBP1-203ENST00000403532 DCAF1Q9Y4B6 1507 aa37.34■■■■□ 3.57
XBP1-203ENST00000403532 ABCC9O60706 1549 aa37.24■■■■□ 3.55
XBP1-203ENST00000403532 DCAF8L2P0C7V8 631 aa37.01■■■■□ 3.51
XBP1-203ENST00000403532 SHROOM4Q9ULL8 1493 aa36.9■■■■□ 3.5
XBP1-203ENST00000403532 MYO15BQ96JP2 1530 aa36.78■■■■□ 3.48
XBP1-203ENST00000403532 NACADO15069 1562 aa36.38■■■■□ 3.41
XBP1-203ENST00000403532 RB1CC1Q8TDY2 1594 aa35.99■■■■□ 3.35
XBP1-203ENST00000403532 SCRIBQ14160 1630 aa35.95■■■■□ 3.35
XBP1-203ENST00000403532 SUPT5HO00267 1087 aaKnown RBP35.72■■■■□ 3.31
XBP1-203ENST00000403532 UNC13AQ9UPW8 1703 aa35.31■■■■□ 3.24
XBP1-203ENST00000403532 RSF1Q96T23 1441 aaPredicted RBP35.12■■■■□ 3.21
XBP1-203ENST00000403532 PABPN1Q86U42 306 aaKnown RBP eCLIP35.04■■■■□ 3.2
XBP1-203ENST00000403532 BICRAQ9NZM4 1560 aa35.03■■■■□ 3.2
XBP1-203ENST00000403532 CECR2Q9BXF3 1484 aa34.97■■■■□ 3.19
XBP1-203ENST00000403532 MROH2BQ7Z745 1585 aa34.81■■■■□ 3.16
XBP1-203ENST00000403532 BAZ1AQ9NRL2 1556 aaPredicted RBP34.77■■■■□ 3.16
XBP1-203ENST00000403532 SMARCA4P51532 1647 aa34.54■■■■□ 3.12
XBP1-203ENST00000403532 WIZO95785 1651 aa34.5■■■■□ 3.11
XBP1-203ENST00000403532 CHIC1Q5VXU3 224 aa34.47■■■■□ 3.11
XBP1-203ENST00000403532 TOP2AP11388 1531 aaKnown RBP34.21■■■■□ 3.07
XBP1-203ENST00000403532 PEG3Q9GZU2 1588 aa34.17■■■■□ 3.06
XBP1-203ENST00000403532 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
XBP1-203ENST00000403532 ATAD2BQ9ULI0 1458 aa33.92■■■■□ 3.02
XBP1-203ENST00000403532 SMARCA2P51531 1590 aa33.91■■■■□ 3.02
XBP1-203ENST00000403532 CCDC88BA6NC98 1476 aa33.87■■■■□ 3.01
XBP1-203ENST00000403532 BAZ1BQ9UIG0 1483 aaKnown RBP33.72■■■□□ 2.99
XBP1-203ENST00000403532 CC2D2AQ9P2K1 1620 aa33.63■■■□□ 2.97
XBP1-203ENST00000403532 TRIM41Q8WV44 630 aa33.61■■■□□ 2.97
XBP1-203ENST00000403532 NCAPD3P42695 1498 aa33.61■■■□□ 2.97
XBP1-203ENST00000403532 HMGXB3Q12766 1538 aa33.56■■■□□ 2.96
XBP1-203ENST00000403532 DNAJC5BQ9UF47 199 aa33.47■■■□□ 2.95
XBP1-203ENST00000403532 ABCC8Q09428 1581 aa33.2■■■□□ 2.91
XBP1-203ENST00000403532 LOC105371045A0A1W2PR82 267 aa33.11■■■□□ 2.89
XBP1-203ENST00000403532 WRNQ14191 1432 aaPredicted RBP eCLIP33.02■■■□□ 2.88
XBP1-203ENST00000403532 CFTRP13569 1480 aa32.94■■■□□ 2.86
XBP1-203ENST00000403532 FAM9AQ8IZU1 332 aaPredicted RBP32.93■■■□□ 2.86
XBP1-203ENST00000403532 SYNJ1O43426 1573 aa32.83■■■□□ 2.85
XBP1-203ENST00000403532 EEA1Q15075 1411 aa32.81■■■□□ 2.84
XBP1-203ENST00000403532 CADPSQ9ULU8 1353 aa32.75■■■□□ 2.83
XBP1-203ENST00000403532 TOP2BQ02880 1626 aa32.71■■■□□ 2.83
XBP1-203ENST00000403532 SOGA1O94964 1423 aa32.7■■■□□ 2.83
XBP1-203ENST00000403532 PRDM2Q13029 1718 aa32.69■■■□□ 2.82
XBP1-203ENST00000403532 BIVM-ERCC5R4GMW8 1640 aa32.66■■■□□ 2.82
XBP1-203ENST00000403532 CSRNP3Q8WYN3 585 aa32.56■■■□□ 2.8
XBP1-203ENST00000403532 RUSC2Q8N2Y8 1516 aa32.55■■■□□ 2.8
XBP1-203ENST00000403532 NESP48681 1621 aa32.54■■■□□ 2.8
XBP1-203ENST00000403532 CUX1P39880 1505 aa32.52■■■□□ 2.8
XBP1-203ENST00000403532 EHMT2Q96KQ7 1210 aa32.37■■■□□ 2.77
XBP1-203ENST00000403532 LAMC3Q9Y6N6 1575 aa32.36■■■□□ 2.77
XBP1-203ENST00000403532 FANCD2Q9BXW9 1451 aa32.35■■■□□ 2.77
XBP1-203ENST00000403532 TNIKQ9UKE5 1360 aa32.32■■■□□ 2.76
XBP1-203ENST00000403532 GOLGA3Q08378 1498 aa32.31■■■□□ 2.76
XBP1-203ENST00000403532 KIF21BO75037 1637 aa32.3■■■□□ 2.76
XBP1-203ENST00000403532 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
XBP1-203ENST00000403532 KIF27Q86VH2 1401 aa32.17■■■□□ 2.74
XBP1-203ENST00000403532 DNMBPQ6XZF7 1577 aa32.13■■■□□ 2.73
XBP1-203ENST00000403532 CEP162Q5TB80 1403 aa32.12■■■□□ 2.73
XBP1-203ENST00000403532 PDS5BQ9NTI5 1447 aa32.12■■■□□ 2.73
XBP1-203ENST00000403532 UBTFP17480 764 aaKnown RBP32.11■■■□□ 2.73
XBP1-203ENST00000403532 FGD5Q6ZNL6 1462 aa32.1■■■□□ 2.73
XBP1-203ENST00000403532 PRXQ9BXM0 1461 aa32.07■■■□□ 2.72
XBP1-203ENST00000403532 KIF21AQ7Z4S6 1674 aa32.06■■■□□ 2.72
XBP1-203ENST00000403532 TOPBP1Q92547 1522 aa32.04■■■□□ 2.72
XBP1-203ENST00000403532 ERICH3Q5RHP9 1530 aa32.04■■■□□ 2.72
XBP1-203ENST00000403532 RAPGEF2Q9Y4G8 1499 aa32.02■■■□□ 2.72
XBP1-203ENST00000403532 CUX2O14529 1486 aa31.97■■■□□ 2.71
XBP1-203ENST00000403532 PCGF6Q9BYE7 350 aa31.96■■■□□ 2.71
XBP1-203ENST00000403532 TRIM26Q12899 539 aaPredicted RBP31.95■■■□□ 2.7
XBP1-203ENST00000403532 URB2Q14146 1524 aaKnown RBP31.92■■■□□ 2.7
XBP1-203ENST00000403532 POLA1P09884 1462 aaPredicted RBP31.92■■■□□ 2.7
XBP1-203ENST00000403532 ERCC6Q03468 1493 aa31.9■■■□□ 2.7
XBP1-203ENST00000403532 ABCA10Q8WWZ4 1543 aa31.88■■■□□ 2.69
XBP1-203ENST00000403532 IGF1RP08069 1367 aa31.87■■■□□ 2.69
XBP1-203ENST00000403532 CLIP1P30622 1438 aa31.8■■■□□ 2.68
XBP1-203ENST00000403532 RAD54L2Q9Y4B4 1467 aa31.79■■■□□ 2.68
XBP1-203ENST00000403532 MRC2Q9UBG0 1479 aa31.77■■■□□ 2.68
XBP1-203ENST00000403532 CARMIL1Q5VZK9 1371 aa31.7■■■□□ 2.67
XBP1-203ENST00000403532 THOC2Q8NI27 1593 aaKnown RBP31.69■■■□□ 2.66
XBP1-203ENST00000403532 WDR97A6NE52 1622 aa31.68■■■□□ 2.66
XBP1-203ENST00000403532 WDR62O43379 1518 aa31.63■■■□□ 2.65
XBP1-203ENST00000403532 VPS8Q8N3P4 1428 aa31.59■■■□□ 2.65
XBP1-203ENST00000403532 ABCA5Q8WWZ7 1642 aa31.55■■■□□ 2.64
XBP1-203ENST00000403532 CUL7Q14999 1698 aa31.55■■■□□ 2.64
XBP1-203ENST00000403532 TARBP1Q13395 1621 aaKnown RBP31.53■■■□□ 2.64
XBP1-203ENST00000403532 GAPVD1Q14C86 1478 aa31.48■■■□□ 2.63
XBP1-203ENST00000403532 TDRD9Q8NDG6 1382 aaKnown RBP31.45■■■□□ 2.63
XBP1-203ENST00000403532 ARAP1Q96P48 1450 aa31.44■■■□□ 2.62
XBP1-203ENST00000403532 PPARGC1BQ86YN6 1023 aaKnown RBP31.44■■■□□ 2.62
XBP1-203ENST00000403532 HRCP23327 699 aa31.4■■■□□ 2.62
XBP1-203ENST00000403532 RANGAP1P46060 587 aaPredicted RBP31.38■■■□□ 2.61
XBP1-203ENST00000403532 ARHGAP35Q9NRY4 1499 aa31.37■■■□□ 2.61
XBP1-203ENST00000403532 IFT140Q96RY7 1462 aa31.35■■■□□ 2.61
XBP1-203ENST00000403532 APLP2Q06481 763 aa31.26■■■□□ 2.59
XBP1-203ENST00000403532 ZNF608Q9ULD9 1512 aaPredicted RBP31.24■■■□□ 2.59
XBP1-203ENST00000403532 PBRM1Q86U86 1689 aa31.2■■■□□ 2.59
XBP1-203ENST00000403532 AQRO60306 1485 aaKnown RBP eCLIP31.19■■■□□ 2.581e-8■■■■□ 24.7
XBP1-203ENST00000403532 GRIN2BQ13224 1484 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms