RNA–Protein interactions for RNA: ENST00000215637.7

MADCAM1-201, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-201ENST00000215637 NISCHQ9Y2I1 1504 aa48.75■■■■■ 5.39
MADCAM1-201ENST00000215637 CCDC180Q9P1Z9 1646 aa43.1■■■■■ 4.49
MADCAM1-201ENST00000215637 ABCC9O60706 1549 aa41.85■■■■■ 4.29
MADCAM1-201ENST00000215637 ZCCHC6Q5VYS8 1495 aaKnown RBP40.76■■■■■ 4.12
MADCAM1-201ENST00000215637 DCAF8L2P0C7V8 631 aa40.61■■■■■ 4.09
MADCAM1-201ENST00000215637 NACADO15069 1562 aa40.4■■■■■ 4.06
MADCAM1-201ENST00000215637 RB1CC1Q8TDY2 1594 aa40.37■■■■■ 4.05
MADCAM1-201ENST00000215637 DCAF1Q9Y4B6 1507 aa40.37■■■■■ 4.05
MADCAM1-201ENST00000215637 MYO15BQ96JP2 1530 aa40.29■■■■■ 4.04
MADCAM1-201ENST00000215637 UNC13AQ9UPW8 1703 aa39.45■■■■□ 3.91
MADCAM1-201ENST00000215637 SCRIBQ14160 1630 aa39.37■■■■□ 3.89
MADCAM1-201ENST00000215637 PABPN1Q86U42 306 aaKnown RBP eCLIP39.21■■■■□ 3.87
MADCAM1-201ENST00000215637 BICRAQ9NZM4 1560 aa39.12■■■■□ 3.85
MADCAM1-201ENST00000215637 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
MADCAM1-201ENST00000215637 DNAJC5BQ9UF47 199 aa38.1■■■■□ 3.69
MADCAM1-201ENST00000215637 EIF4G1Q04637 1599 aaKnown RBP38.08■■■■□ 3.69
MADCAM1-201ENST00000215637 CECR2Q9BXF3 1484 aa37.91■■■■□ 3.66
MADCAM1-201ENST00000215637 CC2D2AQ9P2K1 1620 aa37.84■■■■□ 3.65
MADCAM1-201ENST00000215637 BAZ1AQ9NRL2 1556 aaPredicted RBP37.73■■■■□ 3.63
MADCAM1-201ENST00000215637 SMARCA4P51532 1647 aa37.72■■■■□ 3.63
MADCAM1-201ENST00000215637 MROH2BQ7Z745 1585 aa37.6■■■■□ 3.61
MADCAM1-201ENST00000215637 RSF1Q96T23 1441 aaPredicted RBP37.37■■■■□ 3.57
MADCAM1-201ENST00000215637 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
MADCAM1-201ENST00000215637 PEG3Q9GZU2 1588 aa37.34■■■■□ 3.57
MADCAM1-201ENST00000215637 SMARCA2P51531 1590 aa37.33■■■■□ 3.57
MADCAM1-201ENST00000215637 NCAPD3P42695 1498 aa37.28■■■■□ 3.56
MADCAM1-201ENST00000215637 WIZO95785 1651 aa37.24■■■■□ 3.55
MADCAM1-201ENST00000215637 HMGXB3Q12766 1538 aa37.11■■■■□ 3.53
MADCAM1-201ENST00000215637 BAZ1BQ9UIG0 1483 aaKnown RBP37.09■■■■□ 3.53
MADCAM1-201ENST00000215637 TOP2AP11388 1531 aaKnown RBP36.86■■■■□ 3.49
MADCAM1-201ENST00000215637 SUPT5HO00267 1087 aaKnown RBP36.85■■■■□ 3.49
MADCAM1-201ENST00000215637 CCDC88BA6NC98 1476 aa36.41■■■■□ 3.42
MADCAM1-201ENST00000215637 NESP48681 1621 aa36.31■■■■□ 3.4
MADCAM1-201ENST00000215637 LAMC3Q9Y6N6 1575 aa36.24■■■■□ 3.39
MADCAM1-201ENST00000215637 CADPSQ9ULU8 1353 aa36.23■■■■□ 3.39
MADCAM1-201ENST00000215637 CFTRP13569 1480 aa36.07■■■■□ 3.37
MADCAM1-201ENST00000215637 ERCC6Q03468 1493 aa36.05■■■■□ 3.36
MADCAM1-201ENST00000215637 PDS5BQ9NTI5 1447 aa36.01■■■■□ 3.36
MADCAM1-201ENST00000215637 PRDM2Q13029 1718 aa35.93■■■■□ 3.34
MADCAM1-201ENST00000215637 KIF21AQ7Z4S6 1674 aa35.88■■■■□ 3.33
MADCAM1-201ENST00000215637 FANCD2Q9BXW9 1451 aa35.82■■■■□ 3.32
MADCAM1-201ENST00000215637 CEP164Q9UPV0 1460 aa35.74■■■■□ 3.31
MADCAM1-201ENST00000215637 THOC2Q8NI27 1593 aaKnown RBP35.64■■■■□ 3.3
MADCAM1-201ENST00000215637 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
MADCAM1-201ENST00000215637 CUX2O14529 1486 aa35.49■■■■□ 3.27
MADCAM1-201ENST00000215637 WDR62O43379 1518 aa35.45■■■■□ 3.27
MADCAM1-201ENST00000215637 URB2Q14146 1524 aaKnown RBP35.43■■■■□ 3.26
MADCAM1-201ENST00000215637 ABCC8Q09428 1581 aa35.31■■■■□ 3.24
MADCAM1-201ENST00000215637 TOPBP1Q92547 1522 aa35.28■■■■□ 3.24
MADCAM1-201ENST00000215637 DNMBPQ6XZF7 1577 aa35.26■■■■□ 3.24
MADCAM1-201ENST00000215637 CUX1P39880 1505 aa35.24■■■■□ 3.23
MADCAM1-201ENST00000215637 WRNQ14191 1432 aaPredicted RBP eCLIP35.21■■■■□ 3.23
MADCAM1-201ENST00000215637 SYNJ1O43426 1573 aa35.15■■■■□ 3.22
MADCAM1-201ENST00000215637 BIVM-ERCC5R4GMW8 1640 aa35.11■■■■□ 3.21
MADCAM1-201ENST00000215637 TOP2BQ02880 1626 aa35.11■■■■□ 3.21
MADCAM1-201ENST00000215637 POLA1P09884 1462 aaPredicted RBP35.01■■■■□ 3.19
MADCAM1-201ENST00000215637 FGD5Q6ZNL6 1462 aa34.99■■■■□ 3.19
MADCAM1-201ENST00000215637 IFT140Q96RY7 1462 aa34.97■■■■□ 3.19
MADCAM1-201ENST00000215637 SOGA1O94964 1423 aa34.9■■■■□ 3.18
MADCAM1-201ENST00000215637 RAD54L2Q9Y4B4 1467 aa34.87■■■■□ 3.17
MADCAM1-201ENST00000215637 TARBP1Q13395 1621 aaKnown RBP34.85■■■■□ 3.17
MADCAM1-201ENST00000215637 ZNF608Q9ULD9 1512 aaPredicted RBP34.8■■■■□ 3.16
MADCAM1-201ENST00000215637 CHIC1Q5VXU3 224 aa34.78■■■■□ 3.16
MADCAM1-201ENST00000215637 TRIM41Q8WV44 630 aa34.76■■■■□ 3.16
MADCAM1-201ENST00000215637 WDR97A6NE52 1622 aa34.74■■■■□ 3.15
MADCAM1-201ENST00000215637 ABCA10Q8WWZ4 1543 aa34.69■■■■□ 3.14
MADCAM1-201ENST00000215637 TDRD9Q8NDG6 1382 aaKnown RBP34.67■■■■□ 3.14
MADCAM1-201ENST00000215637 AQRO60306 1485 aaKnown RBP eCLIP34.66■■■■□ 3.14
MADCAM1-201ENST00000215637 EIF4G3O43432 1585 aaKnown RBP34.65■■■■□ 3.14
MADCAM1-201ENST00000215637 ABCA5Q8WWZ7 1642 aa34.54■■■■□ 3.12
MADCAM1-201ENST00000215637 GAPVD1Q14C86 1478 aa34.48■■■■□ 3.11
MADCAM1-201ENST00000215637 GRIN2BQ13224 1484 aa34.42■■■■□ 3.1
MADCAM1-201ENST00000215637 KIF27Q86VH2 1401 aa34.4■■■■□ 3.1
MADCAM1-201ENST00000215637 PBRM1Q86U86 1689 aa34.4■■■■□ 3.1
MADCAM1-201ENST00000215637 RUSC2Q8N2Y8 1516 aa34.33■■■■□ 3.09
MADCAM1-201ENST00000215637 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
MADCAM1-201ENST00000215637 MAGI1Q96QZ7 1491 aaPredicted RBP34.29■■■■□ 3.08
MADCAM1-201ENST00000215637 ERICH3Q5RHP9 1530 aa34.29■■■■□ 3.08
MADCAM1-201ENST00000215637 FBLN2P98095 1184 aa34.24■■■■□ 3.07
MADCAM1-201ENST00000215637 IGF1RP08069 1367 aa34.19■■■■□ 3.06
MADCAM1-201ENST00000215637 CHMP7Q8WUX9 453 aaPredicted RBP34.18■■■■□ 3.06
MADCAM1-201ENST00000215637 EEA1Q15075 1411 aa34.17■■■■□ 3.06
MADCAM1-201ENST00000215637 CHD1O14646 1710 aa34.17■■■■□ 3.06
MADCAM1-201ENST00000215637 OSCARQ8IYS5 282 aa34.16■■■■□ 3.06
MADCAM1-201ENST00000215637 SYNJ2O15056 1496 aa34.16■■■■□ 3.06
MADCAM1-201ENST00000215637 ADAMTS12P58397 1594 aa34.15■■■■□ 3.06
MADCAM1-201ENST00000215637 CUL7Q14999 1698 aa34.12■■■■□ 3.05
MADCAM1-201ENST00000215637 FHAD1B1AJZ9 1412 aa34.09■■■■□ 3.05
MADCAM1-201ENST00000215637 DNAJC5Q9H3Z4 198 aa34.05■■■■□ 3.04
MADCAM1-201ENST00000215637 FAM9AQ8IZU1 332 aaPredicted RBP34.03■■■■□ 3.04
MADCAM1-201ENST00000215637 CSRNP3Q8WYN3 585 aa34■■■■□ 3.03
MADCAM1-201ENST00000215637 CARMIL1Q5VZK9 1371 aa33.99■■■■□ 3.03
MADCAM1-201ENST00000215637 GRIN2AQ12879 1464 aa33.98■■■■□ 3.03
MADCAM1-201ENST00000215637 PRXQ9BXM0 1461 aa33.94■■■■□ 3.02
MADCAM1-201ENST00000215637 RAPGEF2Q9Y4G8 1499 aa33.88■■■■□ 3.01
MADCAM1-201ENST00000215637 KIF21BO75037 1637 aa33.82■■■■□ 3
MADCAM1-201ENST00000215637 NUP160Q12769 1436 aa33.8■■■■□ 3
MADCAM1-201ENST00000215637 CEP170Q5SW79 1584 aa33.78■■■■□ 3
MADCAM1-201ENST00000215637 CLASP1Q7Z460 1538 aa33.77■■■■□ 3
MADCAM1-201ENST00000215637 GOLGA3Q08378 1498 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms