RNA–Protein interactions for RNA: ENST00000394738.7

RFT1-202, Transcript of RFT1 homolog, humanhuman

TSL 5 BASIC

Gene RFT1, Length 1,800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-202ENST00000394738 NISCHQ9Y2I1 1504 aa48.25■■■■■ 5.31
RFT1-202ENST00000394738 CCDC180Q9P1Z9 1646 aa42.55■■■■■ 4.4
RFT1-202ENST00000394738 ABCC9O60706 1549 aa41.04■■■■■ 4.16
RFT1-202ENST00000394738 ZCCHC6Q5VYS8 1495 aaKnown RBP40.33■■■■■ 4.05
RFT1-202ENST00000394738 DCAF8L2P0C7V8 631 aa40.14■■■■■ 4.02
RFT1-202ENST00000394738 DCAF1Q9Y4B6 1507 aa39.87■■■■□ 3.97
RFT1-202ENST00000394738 NACADO15069 1562 aa39.82■■■■□ 3.96
RFT1-202ENST00000394738 MYO15BQ96JP2 1530 aa39.74■■■■□ 3.95
RFT1-202ENST00000394738 RB1CC1Q8TDY2 1594 aa39.71■■■■□ 3.95
RFT1-202ENST00000394738 SCRIBQ14160 1630 aa38.99■■■■□ 3.83
RFT1-202ENST00000394738 UNC13AQ9UPW8 1703 aa38.97■■■■□ 3.83
RFT1-202ENST00000394738 SHROOM4Q9ULL8 1493 aa38.69■■■■□ 3.78
RFT1-202ENST00000394738 BICRAQ9NZM4 1560 aa38.54■■■■□ 3.76
RFT1-202ENST00000394738 PABPN1Q86U42 306 aaKnown RBP eCLIP38.5■■■■□ 3.75
RFT1-202ENST00000394738 CECR2Q9BXF3 1484 aa37.57■■■■□ 3.6
RFT1-202ENST00000394738 EIF4G1Q04637 1599 aaKnown RBP37.45■■■■□ 3.58
RFT1-202ENST00000394738 BAZ1AQ9NRL2 1556 aaPredicted RBP37.33■■■■□ 3.57
RFT1-202ENST00000394738 SMARCA4P51532 1647 aa37.31■■■■□ 3.56
RFT1-202ENST00000394738 MROH2BQ7Z745 1585 aa37.24■■■■□ 3.55
RFT1-202ENST00000394738 CC2D2AQ9P2K1 1620 aa37.14■■■■□ 3.54
RFT1-202ENST00000394738 RSF1Q96T23 1441 aaPredicted RBP37.04■■■■□ 3.52
RFT1-202ENST00000394738 DNAJC5BQ9UF47 199 aa37.04■■■■□ 3.52
RFT1-202ENST00000394738 WIZO95785 1651 aa36.93■■■■□ 3.5
RFT1-202ENST00000394738 ATAD2BQ9ULI0 1458 aa36.89■■■■□ 3.5
RFT1-202ENST00000394738 PEG3Q9GZU2 1588 aa36.87■■■■□ 3.49
RFT1-202ENST00000394738 SMARCA2P51531 1590 aa36.86■■■■□ 3.49
RFT1-202ENST00000394738 SUPT5HO00267 1087 aaKnown RBP36.75■■■■□ 3.47
RFT1-202ENST00000394738 NCAPD3P42695 1498 aa36.72■■■■□ 3.47
RFT1-202ENST00000394738 BAZ1BQ9UIG0 1483 aaKnown RBP36.64■■■■□ 3.46
RFT1-202ENST00000394738 HMGXB3Q12766 1538 aa36.61■■■■□ 3.45
RFT1-202ENST00000394738 TOP2AP11388 1531 aaKnown RBP36.48■■■■□ 3.43
RFT1-202ENST00000394738 CCDC88BA6NC98 1476 aa36.09■■■■□ 3.37
RFT1-202ENST00000394738 NESP48681 1621 aa35.75■■■■□ 3.31
RFT1-202ENST00000394738 CADPSQ9ULU8 1353 aa35.71■■■■□ 3.31
RFT1-202ENST00000394738 LAMC3Q9Y6N6 1575 aa35.66■■■■□ 3.3
RFT1-202ENST00000394738 CFTRP13569 1480 aa35.65■■■■□ 3.3
RFT1-202ENST00000394738 PRDM2Q13029 1718 aa35.53■■■■□ 3.28
RFT1-202ENST00000394738 PDS5BQ9NTI5 1447 aa35.39■■■■□ 3.26
RFT1-202ENST00000394738 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
RFT1-202ENST00000394738 FANCD2Q9BXW9 1451 aa35.33■■■■□ 3.25
RFT1-202ENST00000394738 ERCC6Q03468 1493 aa35.27■■■■□ 3.24
RFT1-202ENST00000394738 CEP164Q9UPV0 1460 aa35.21■■■■□ 3.23
RFT1-202ENST00000394738 ABCC8Q09428 1581 aa35.06■■■■□ 3.2
RFT1-202ENST00000394738 THOC2Q8NI27 1593 aaKnown RBP35■■■■□ 3.19
RFT1-202ENST00000394738 MRC2Q9UBG0 1479 aa35■■■■□ 3.19
RFT1-202ENST00000394738 URB2Q14146 1524 aaKnown RBP34.95■■■■□ 3.19
RFT1-202ENST00000394738 WRNQ14191 1432 aaPredicted RBP eCLIP34.9■■■■□ 3.18
RFT1-202ENST00000394738 CUX1P39880 1505 aa34.88■■■■□ 3.17
RFT1-202ENST00000394738 DNMBPQ6XZF7 1577 aa34.87■■■■□ 3.17
RFT1-202ENST00000394738 WDR62O43379 1518 aa34.87■■■■□ 3.17
RFT1-202ENST00000394738 TOPBP1Q92547 1522 aa34.86■■■■□ 3.17
RFT1-202ENST00000394738 SYNJ1O43426 1573 aa34.83■■■■□ 3.17
RFT1-202ENST00000394738 TOP2BQ02880 1626 aa34.76■■■■□ 3.15
RFT1-202ENST00000394738 BIVM-ERCC5R4GMW8 1640 aa34.76■■■■□ 3.15
RFT1-202ENST00000394738 CHIC1Q5VXU3 224 aa34.68■■■■□ 3.14
RFT1-202ENST00000394738 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
RFT1-202ENST00000394738 TRIM41Q8WV44 630 aa34.62■■■■□ 3.13
RFT1-202ENST00000394738 POLA1P09884 1462 aaPredicted RBP34.62■■■■□ 3.13
RFT1-202ENST00000394738 CUX2O14529 1486 aa34.56■■■■□ 3.12
RFT1-202ENST00000394738 RAD54L2Q9Y4B4 1467 aa34.5■■■■□ 3.11
RFT1-202ENST00000394738 SOGA1O94964 1423 aa34.49■■■■□ 3.11
RFT1-202ENST00000394738 TARBP1Q13395 1621 aaKnown RBP34.44■■■■□ 3.1
RFT1-202ENST00000394738 IFT140Q96RY7 1462 aa34.41■■■■□ 3.1
RFT1-202ENST00000394738 WDR97A6NE52 1622 aa34.35■■■■□ 3.09
RFT1-202ENST00000394738 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
RFT1-202ENST00000394738 ZNF608Q9ULD9 1512 aaPredicted RBP34.28■■■■□ 3.08
RFT1-202ENST00000394738 TDRD9Q8NDG6 1382 aaKnown RBP34.23■■■■□ 3.07
RFT1-202ENST00000394738 AQRO60306 1485 aaKnown RBP eCLIP34.18■■■■□ 3.06
RFT1-202ENST00000394738 EIF4G3O43432 1585 aaKnown RBP34.17■■■■□ 3.06
RFT1-202ENST00000394738 ABCA5Q8WWZ7 1642 aa34.14■■■■□ 3.06
RFT1-202ENST00000394738 RUSC2Q8N2Y8 1516 aa34.12■■■■□ 3.05
RFT1-202ENST00000394738 KIF27Q86VH2 1401 aa34.1■■■■□ 3.05
RFT1-202ENST00000394738 GAPVD1Q14C86 1478 aa34.09■■■■□ 3.05
RFT1-202ENST00000394738 PBRM1Q86U86 1689 aa34.05■■■■□ 3.04
RFT1-202ENST00000394738 FAM9AQ8IZU1 332 aaPredicted RBP33.98■■■■□ 3.03
RFT1-202ENST00000394738 GRIN2BQ13224 1484 aa33.96■■■■□ 3.03
RFT1-202ENST00000394738 ERICH3Q5RHP9 1530 aa33.9■■■■□ 3.02
RFT1-202ENST00000394738 IGF1RP08069 1367 aa33.89■■■■□ 3.02
RFT1-202ENST00000394738 EEA1Q15075 1411 aa33.87■■■■□ 3.01
RFT1-202ENST00000394738 SNAPC4Q5SXM2 1469 aa33.86■■■■□ 3.01
RFT1-202ENST00000394738 CSRNP3Q8WYN3 585 aa33.81■■■■□ 3
RFT1-202ENST00000394738 MAGI1Q96QZ7 1491 aaPredicted RBP33.78■■■■□ 3
RFT1-202ENST00000394738 CUL7Q14999 1698 aa33.76■■■□□ 2.99
RFT1-202ENST00000394738 ADAMTS12P58397 1594 aa33.75■■■□□ 2.99
RFT1-202ENST00000394738 CARMIL1Q5VZK9 1371 aa33.71■■■□□ 2.99
RFT1-202ENST00000394738 FHAD1B1AJZ9 1412 aa33.69■■■□□ 2.98
RFT1-202ENST00000394738 FBLN2P98095 1184 aa33.66■■■□□ 2.98
RFT1-202ENST00000394738 CHD1O14646 1710 aa33.66■■■□□ 2.98
RFT1-202ENST00000394738 SYNJ2O15056 1496 aa33.66■■■□□ 2.98
RFT1-202ENST00000394738 PRXQ9BXM0 1461 aa33.63■■■□□ 2.97
RFT1-202ENST00000394738 CHMP7Q8WUX9 453 aaPredicted RBP33.63■■■□□ 2.97
RFT1-202ENST00000394738 RAPGEF2Q9Y4G8 1499 aa33.57■■■□□ 2.96
RFT1-202ENST00000394738 EHMT2Q96KQ7 1210 aa33.56■■■□□ 2.96
RFT1-202ENST00000394738 GRIN2AQ12879 1464 aa33.55■■■□□ 2.96
RFT1-202ENST00000394738 KIF21BO75037 1637 aa33.54■■■□□ 2.96
RFT1-202ENST00000394738 CEP170Q5SW79 1584 aa33.39■■■□□ 2.94
RFT1-202ENST00000394738 GOLGA3Q08378 1498 aa33.39■■■□□ 2.94
RFT1-202ENST00000394738 LOC105371045A0A1W2PR82 267 aa33.34■■■□□ 2.93
RFT1-202ENST00000394738 NUP160Q12769 1436 aa33.34■■■□□ 2.93
RFT1-202ENST00000394738 OSCARQ8IYS5 282 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms