RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 NISCHQ9Y2I1 1504 aa47.91■■■■■ 5.26
CDC42SE2-206ENST00000503291 CCDC180Q9P1Z9 1646 aa42.14■■■■■ 4.34
CDC42SE2-206ENST00000503291 ABCC9O60706 1549 aa40.58■■■■■ 4.09
CDC42SE2-206ENST00000503291 ZCCHC6Q5VYS8 1495 aaKnown RBP40.07■■■■■ 4
CDC42SE2-206ENST00000503291 DCAF8L2P0C7V8 631 aa39.86■■■■□ 3.97
CDC42SE2-206ENST00000503291 DCAF1Q9Y4B6 1507 aa39.63■■■■□ 3.93
CDC42SE2-206ENST00000503291 MYO15BQ96JP2 1530 aa39.48■■■■□ 3.91
CDC42SE2-206ENST00000503291 NACADO15069 1562 aa39.47■■■■□ 3.91
CDC42SE2-206ENST00000503291 RB1CC1Q8TDY2 1594 aa39.31■■■■□ 3.88
CDC42SE2-206ENST00000503291 SCRIBQ14160 1630 aa38.62■■■■□ 3.77
CDC42SE2-206ENST00000503291 SHROOM4Q9ULL8 1493 aa38.47■■■■□ 3.75
CDC42SE2-206ENST00000503291 UNC13AQ9UPW8 1703 aa38.45■■■■□ 3.75
CDC42SE2-206ENST00000503291 BICRAQ9NZM4 1560 aa38.13■■■■□ 3.69
CDC42SE2-206ENST00000503291 PABPN1Q86U42 306 aaKnown RBP eCLIP38.12■■■■□ 3.69
CDC42SE2-206ENST00000503291 CECR2Q9BXF3 1484 aa37.29■■■■□ 3.56
CDC42SE2-206ENST00000503291 BAZ1AQ9NRL2 1556 aaPredicted RBP37.06■■■■□ 3.52
CDC42SE2-206ENST00000503291 EIF4G1Q04637 1599 aaKnown RBP37.05■■■■□ 3.52
CDC42SE2-206ENST00000503291 SMARCA4P51532 1647 aa36.98■■■■□ 3.51
CDC42SE2-206ENST00000503291 MROH2BQ7Z745 1585 aa36.97■■■■□ 3.51
CDC42SE2-206ENST00000503291 RSF1Q96T23 1441 aaPredicted RBP36.86■■■■□ 3.49
CDC42SE2-206ENST00000503291 CC2D2AQ9P2K1 1620 aa36.71■■■■□ 3.47
CDC42SE2-206ENST00000503291 SUPT5HO00267 1087 aaKnown RBP36.66■■■■□ 3.46
CDC42SE2-206ENST00000503291 WIZO95785 1651 aa36.61■■■■□ 3.45
CDC42SE2-206ENST00000503291 ATAD2BQ9ULI0 1458 aa36.6■■■■□ 3.45
CDC42SE2-206ENST00000503291 PEG3Q9GZU2 1588 aa36.59■■■■□ 3.45
CDC42SE2-206ENST00000503291 DNAJC5BQ9UF47 199 aa36.56■■■■□ 3.44
CDC42SE2-206ENST00000503291 SMARCA2P51531 1590 aa36.56■■■■□ 3.44
CDC42SE2-206ENST00000503291 NCAPD3P42695 1498 aa36.45■■■■□ 3.43
CDC42SE2-206ENST00000503291 BAZ1BQ9UIG0 1483 aaKnown RBP36.34■■■■□ 3.41
CDC42SE2-206ENST00000503291 HMGXB3Q12766 1538 aa36.3■■■■□ 3.4
CDC42SE2-206ENST00000503291 TOP2AP11388 1531 aaKnown RBP36.22■■■■□ 3.39
CDC42SE2-206ENST00000503291 CCDC88BA6NC98 1476 aa35.86■■■■□ 3.33
CDC42SE2-206ENST00000503291 CADPSQ9ULU8 1353 aa35.46■■■■□ 3.27
CDC42SE2-206ENST00000503291 CFTRP13569 1480 aa35.4■■■■□ 3.26
CDC42SE2-206ENST00000503291 NESP48681 1621 aa35.37■■■■□ 3.25
CDC42SE2-206ENST00000503291 LAMC3Q9Y6N6 1575 aa35.32■■■■□ 3.25
CDC42SE2-206ENST00000503291 PRDM2Q13029 1718 aa35.12■■■■□ 3.21
CDC42SE2-206ENST00000503291 PDS5BQ9NTI5 1447 aa35.09■■■■□ 3.21
CDC42SE2-206ENST00000503291 FANCD2Q9BXW9 1451 aa35.03■■■■□ 3.2
CDC42SE2-206ENST00000503291 KIF21AQ7Z4S6 1674 aa34.91■■■■□ 3.18
CDC42SE2-206ENST00000503291 CEP164Q9UPV0 1460 aa34.9■■■■□ 3.18
CDC42SE2-206ENST00000503291 ERCC6Q03468 1493 aa34.89■■■■□ 3.18
CDC42SE2-206ENST00000503291 ABCC8Q09428 1581 aa34.81■■■■□ 3.16
CDC42SE2-206ENST00000503291 WRNQ14191 1432 aaPredicted RBP eCLIP34.72■■■■□ 3.15
CDC42SE2-206ENST00000503291 CHIC1Q5VXU3 224 aa34.66■■■■□ 3.14
CDC42SE2-206ENST00000503291 MRC2Q9UBG0 1479 aa34.66■■■■□ 3.14
CDC42SE2-206ENST00000503291 URB2Q14146 1524 aaKnown RBP34.64■■■■□ 3.14
CDC42SE2-206ENST00000503291 CUX1P39880 1505 aa34.62■■■■□ 3.13
CDC42SE2-206ENST00000503291 SYNJ1O43426 1573 aa34.57■■■■□ 3.13
CDC42SE2-206ENST00000503291 THOC2Q8NI27 1593 aaKnown RBP34.57■■■■□ 3.12
CDC42SE2-206ENST00000503291 TOPBP1Q92547 1522 aa34.56■■■■□ 3.12
CDC42SE2-206ENST00000503291 DNMBPQ6XZF7 1577 aa34.56■■■■□ 3.12
CDC42SE2-206ENST00000503291 TRIM41Q8WV44 630 aa34.54■■■■□ 3.12
CDC42SE2-206ENST00000503291 TOP2BQ02880 1626 aa34.51■■■■□ 3.12
CDC42SE2-206ENST00000503291 WDR62O43379 1518 aa34.51■■■■□ 3.11
CDC42SE2-206ENST00000503291 BIVM-ERCC5R4GMW8 1640 aa34.48■■■■□ 3.11
CDC42SE2-206ENST00000503291 FGD5Q6ZNL6 1462 aa34.37■■■■□ 3.09
CDC42SE2-206ENST00000503291 POLA1P09884 1462 aaPredicted RBP34.34■■■■□ 3.09
CDC42SE2-206ENST00000503291 SOGA1O94964 1423 aa34.24■■■■□ 3.07
CDC42SE2-206ENST00000503291 CUX2O14529 1486 aa34.23■■■■□ 3.07
CDC42SE2-206ENST00000503291 RAD54L2Q9Y4B4 1467 aa34.21■■■■□ 3.07
CDC42SE2-206ENST00000503291 IFT140Q96RY7 1462 aa34.12■■■■□ 3.05
CDC42SE2-206ENST00000503291 TARBP1Q13395 1621 aaKnown RBP34.11■■■■□ 3.05
CDC42SE2-206ENST00000503291 ABCA10Q8WWZ4 1543 aa34.06■■■■□ 3.04
CDC42SE2-206ENST00000503291 WDR97A6NE52 1622 aa33.99■■■■□ 3.03
CDC42SE2-206ENST00000503291 TDRD9Q8NDG6 1382 aaKnown RBP33.97■■■■□ 3.03
CDC42SE2-206ENST00000503291 ZNF608Q9ULD9 1512 aaPredicted RBP33.95■■■■□ 3.03
CDC42SE2-206ENST00000503291 RUSC2Q8N2Y8 1516 aa33.93■■■■□ 3.02
CDC42SE2-206ENST00000503291 KIF27Q86VH2 1401 aa33.93■■■■□ 3.02
CDC42SE2-206ENST00000503291 AQRO60306 1485 aaKnown RBP eCLIP33.89■■■■□ 3.021e-6■■□□□ 11.4
CDC42SE2-206ENST00000503291 FAM9AQ8IZU1 332 aaPredicted RBP33.86■■■■□ 3.01
CDC42SE2-206ENST00000503291 GAPVD1Q14C86 1478 aa33.84■■■■□ 3.01
CDC42SE2-206ENST00000503291 ABCA5Q8WWZ7 1642 aa33.83■■■■□ 3.01
CDC42SE2-206ENST00000503291 EIF4G3O43432 1585 aaKnown RBP33.8■■■■□ 3
CDC42SE2-206ENST00000503291 EEA1Q15075 1411 aa33.79■■■■□ 3
CDC42SE2-206ENST00000503291 IGF1RP08069 1367 aa33.72■■■□□ 2.99
CDC42SE2-206ENST00000503291 CSRNP3Q8WYN3 585 aa33.72■■■□□ 2.99
CDC42SE2-206ENST00000503291 GRIN2BQ13224 1484 aa33.69■■■□□ 2.98
CDC42SE2-206ENST00000503291 PBRM1Q86U86 1689 aa33.65■■■□□ 2.98
CDC42SE2-206ENST00000503291 ERICH3Q5RHP9 1530 aa33.65■■■□□ 2.98
CDC42SE2-206ENST00000503291 SNAPC4Q5SXM2 1469 aa33.55■■■□□ 2.96
CDC42SE2-206ENST00000503291 CARMIL1Q5VZK9 1371 aa33.53■■■□□ 2.96
CDC42SE2-206ENST00000503291 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
CDC42SE2-206ENST00000503291 CUL7Q14999 1698 aa33.49■■■□□ 2.95
CDC42SE2-206ENST00000503291 PRXQ9BXM0 1461 aa33.48■■■□□ 2.95
CDC42SE2-206ENST00000503291 FHAD1B1AJZ9 1412 aa33.46■■■□□ 2.95
CDC42SE2-206ENST00000503291 ADAMTS12P58397 1594 aa33.44■■■□□ 2.94
CDC42SE2-206ENST00000503291 RAPGEF2Q9Y4G8 1499 aa33.39■■■□□ 2.94
CDC42SE2-206ENST00000503291 EHMT2Q96KQ7 1210 aa33.39■■■□□ 2.94
CDC42SE2-206ENST00000503291 CHMP7Q8WUX9 453 aaPredicted RBP33.38■■■□□ 2.93
CDC42SE2-206ENST00000503291 SYNJ2O15056 1496 aa33.37■■■□□ 2.93
CDC42SE2-206ENST00000503291 FBLN2P98095 1184 aa33.37■■■□□ 2.93
CDC42SE2-206ENST00000503291 KIF21BO75037 1637 aa33.37■■■□□ 2.93
CDC42SE2-206ENST00000503291 LOC105371045A0A1W2PR82 267 aa33.31■■■□□ 2.92
CDC42SE2-206ENST00000503291 GOLGA3Q08378 1498 aa33.27■■■□□ 2.92
CDC42SE2-206ENST00000503291 GRIN2AQ12879 1464 aa33.27■■■□□ 2.92
CDC42SE2-206ENST00000503291 CHD1O14646 1710 aa33.22■■■□□ 2.91
CDC42SE2-206ENST00000503291 UBTFP17480 764 aaKnown RBP33.21■■■□□ 2.91
CDC42SE2-206ENST00000503291 NUP160Q12769 1436 aa33.07■■■□□ 2.89
CDC42SE2-206ENST00000503291 CEP170Q5SW79 1584 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms