RNA–Protein interactions for RNA: ENST00000355868.3

WDR88-201, Transcript of WD repeat domain 88, humanhuman

APPRIS P2 TSL 2 BASIC

Gene WDR88, Length 1,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88-201ENST00000355868 NISCHQ9Y2I1 1504 aa49.35■■■■■ 5.49
WDR88-201ENST00000355868 CCDC180Q9P1Z9 1646 aa43.5■■■■■ 4.55
WDR88-201ENST00000355868 ABCC9O60706 1549 aa42.24■■■■■ 4.35
WDR88-201ENST00000355868 ZCCHC6Q5VYS8 1495 aaKnown RBP41.21■■■■■ 4.19
WDR88-201ENST00000355868 DCAF8L2P0C7V8 631 aa41.07■■■■■ 4.17
WDR88-201ENST00000355868 NACADO15069 1562 aa40.81■■■■■ 4.12
WDR88-201ENST00000355868 DCAF1Q9Y4B6 1507 aa40.78■■■■■ 4.12
WDR88-201ENST00000355868 MYO15BQ96JP2 1530 aa40.75■■■■■ 4.11
WDR88-201ENST00000355868 RB1CC1Q8TDY2 1594 aa40.72■■■■■ 4.11
WDR88-201ENST00000355868 UNC13AQ9UPW8 1703 aa39.95■■■■□ 3.99
WDR88-201ENST00000355868 SCRIBQ14160 1630 aa39.85■■■■□ 3.97
WDR88-201ENST00000355868 BICRAQ9NZM4 1560 aa39.65■■■■□ 3.94
WDR88-201ENST00000355868 PABPN1Q86U42 306 aaKnown RBP eCLIP39.64■■■■□ 3.94
WDR88-201ENST00000355868 SHROOM4Q9ULL8 1493 aa39.4■■■■□ 3.9
WDR88-201ENST00000355868 DNAJC5BQ9UF47 199 aa38.52■■■■□ 3.76
WDR88-201ENST00000355868 CECR2Q9BXF3 1484 aa38.51■■■■□ 3.75
WDR88-201ENST00000355868 EIF4G1Q04637 1599 aaKnown RBP38.49■■■■□ 3.75
WDR88-201ENST00000355868 CC2D2AQ9P2K1 1620 aa38.21■■■■□ 3.71
WDR88-201ENST00000355868 SMARCA4P51532 1647 aa38.15■■■■□ 3.7
WDR88-201ENST00000355868 BAZ1AQ9NRL2 1556 aaPredicted RBP38.14■■■■□ 3.7
WDR88-201ENST00000355868 MROH2BQ7Z745 1585 aa38.11■■■■□ 3.69
WDR88-201ENST00000355868 ATAD2BQ9ULI0 1458 aa37.86■■■■□ 3.65
WDR88-201ENST00000355868 RSF1Q96T23 1441 aaPredicted RBP37.86■■■■□ 3.65
WDR88-201ENST00000355868 PEG3Q9GZU2 1588 aa37.78■■■■□ 3.64
WDR88-201ENST00000355868 NCAPD3P42695 1498 aa37.74■■■■□ 3.63
WDR88-201ENST00000355868 SMARCA2P51531 1590 aa37.72■■■■□ 3.63
WDR88-201ENST00000355868 WIZO95785 1651 aa37.71■■■■□ 3.63
WDR88-201ENST00000355868 HMGXB3Q12766 1538 aa37.53■■■■□ 3.6
WDR88-201ENST00000355868 BAZ1BQ9UIG0 1483 aaKnown RBP37.5■■■■□ 3.59
WDR88-201ENST00000355868 SUPT5HO00267 1087 aaKnown RBP37.3■■■■□ 3.56
WDR88-201ENST00000355868 TOP2AP11388 1531 aaKnown RBP37.23■■■■□ 3.55
WDR88-201ENST00000355868 CCDC88BA6NC98 1476 aa36.9■■■■□ 3.5
WDR88-201ENST00000355868 NESP48681 1621 aa36.77■■■■□ 3.48
WDR88-201ENST00000355868 CADPSQ9ULU8 1353 aa36.67■■■■□ 3.46
WDR88-201ENST00000355868 LAMC3Q9Y6N6 1575 aa36.58■■■■□ 3.45
WDR88-201ENST00000355868 CFTRP13569 1480 aa36.58■■■■□ 3.45
WDR88-201ENST00000355868 PDS5BQ9NTI5 1447 aa36.31■■■■□ 3.4
WDR88-201ENST00000355868 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.39
WDR88-201ENST00000355868 ERCC6Q03468 1493 aa36.24■■■■□ 3.39
WDR88-201ENST00000355868 FANCD2Q9BXW9 1451 aa36.23■■■■□ 3.39
WDR88-201ENST00000355868 PRDM2Q13029 1718 aa36.2■■■■□ 3.39
WDR88-201ENST00000355868 CEP164Q9UPV0 1460 aa36.08■■■■□ 3.37
WDR88-201ENST00000355868 THOC2Q8NI27 1593 aaKnown RBP36■■■■□ 3.35
WDR88-201ENST00000355868 MRC2Q9UBG0 1479 aa35.92■■■■□ 3.34
WDR88-201ENST00000355868 URB2Q14146 1524 aaKnown RBP35.9■■■■□ 3.34
WDR88-201ENST00000355868 WDR62O43379 1518 aa35.82■■■■□ 3.32
WDR88-201ENST00000355868 ABCC8Q09428 1581 aa35.73■■■■□ 3.31
WDR88-201ENST00000355868 TOPBP1Q92547 1522 aa35.72■■■■□ 3.31
WDR88-201ENST00000355868 CUX1P39880 1505 aa35.69■■■■□ 3.3
WDR88-201ENST00000355868 DNMBPQ6XZF7 1577 aa35.66■■■■□ 3.3
WDR88-201ENST00000355868 CUX2O14529 1486 aa35.66■■■■□ 3.3
WDR88-201ENST00000355868 WRNQ14191 1432 aaPredicted RBP eCLIP35.6■■■■□ 3.29
WDR88-201ENST00000355868 SYNJ1O43426 1573 aa35.54■■■■□ 3.28
WDR88-201ENST00000355868 POLA1P09884 1462 aaPredicted RBP35.48■■■■□ 3.27
WDR88-201ENST00000355868 TOP2BQ02880 1626 aa35.46■■■■□ 3.27
WDR88-201ENST00000355868 FGD5Q6ZNL6 1462 aa35.45■■■■□ 3.26
WDR88-201ENST00000355868 BIVM-ERCC5R4GMW8 1640 aa35.43■■■■□ 3.26
WDR88-201ENST00000355868 RAD54L2Q9Y4B4 1467 aa35.37■■■■□ 3.25
WDR88-201ENST00000355868 SOGA1O94964 1423 aa35.32■■■■□ 3.24
WDR88-201ENST00000355868 TARBP1Q13395 1621 aaKnown RBP35.32■■■■□ 3.24
WDR88-201ENST00000355868 IFT140Q96RY7 1462 aa35.29■■■■□ 3.24
WDR88-201ENST00000355868 ZNF608Q9ULD9 1512 aaPredicted RBP35.25■■■■□ 3.23
WDR88-201ENST00000355868 CHIC1Q5VXU3 224 aa35.15■■■■□ 3.22
WDR88-201ENST00000355868 TRIM41Q8WV44 630 aa35.13■■■■□ 3.21
WDR88-201ENST00000355868 TDRD9Q8NDG6 1382 aaKnown RBP35.13■■■■□ 3.21
WDR88-201ENST00000355868 AQRO60306 1485 aaKnown RBP eCLIP35.11■■■■□ 3.21
WDR88-201ENST00000355868 ABCA10Q8WWZ4 1543 aa35.11■■■■□ 3.21
WDR88-201ENST00000355868 WDR97A6NE52 1622 aa35.11■■■■□ 3.21
WDR88-201ENST00000355868 EIF4G3O43432 1585 aaKnown RBP35.03■■■■□ 3.2
WDR88-201ENST00000355868 ABCA5Q8WWZ7 1642 aa34.92■■■■□ 3.18
WDR88-201ENST00000355868 GAPVD1Q14C86 1478 aa34.9■■■■□ 3.18
WDR88-201ENST00000355868 RUSC2Q8N2Y8 1516 aa34.83■■■■□ 3.17
WDR88-201ENST00000355868 GRIN2BQ13224 1484 aa34.79■■■■□ 3.16
WDR88-201ENST00000355868 KIF27Q86VH2 1401 aa34.77■■■■□ 3.16
WDR88-201ENST00000355868 PBRM1Q86U86 1689 aa34.75■■■■□ 3.15
WDR88-201ENST00000355868 SNAPC4Q5SXM2 1469 aa34.71■■■■□ 3.15
WDR88-201ENST00000355868 IGF1RP08069 1367 aa34.7■■■■□ 3.15
WDR88-201ENST00000355868 ERICH3Q5RHP9 1530 aa34.66■■■■□ 3.14
WDR88-201ENST00000355868 MAGI1Q96QZ7 1491 aaPredicted RBP34.62■■■■□ 3.13
WDR88-201ENST00000355868 FBLN2P98095 1184 aa34.52■■■■□ 3.12
WDR88-201ENST00000355868 ADAMTS12P58397 1594 aa34.52■■■■□ 3.12
WDR88-201ENST00000355868 SYNJ2O15056 1496 aa34.51■■■■□ 3.12
WDR88-201ENST00000355868 FHAD1B1AJZ9 1412 aa34.49■■■■□ 3.11
WDR88-201ENST00000355868 CHD1O14646 1710 aa34.48■■■■□ 3.11
WDR88-201ENST00000355868 CHMP7Q8WUX9 453 aaPredicted RBP34.48■■■■□ 3.11
WDR88-201ENST00000355868 FAM9AQ8IZU1 332 aaPredicted RBP34.47■■■■□ 3.11
WDR88-201ENST00000355868 CARMIL1Q5VZK9 1371 aa34.44■■■■□ 3.1
WDR88-201ENST00000355868 CSRNP3Q8WYN3 585 aa34.41■■■■□ 3.1
WDR88-201ENST00000355868 CUL7Q14999 1698 aa34.39■■■■□ 3.1
WDR88-201ENST00000355868 GRIN2AQ12879 1464 aa34.38■■■■□ 3.09
WDR88-201ENST00000355868 EEA1Q15075 1411 aa34.38■■■■□ 3.09
WDR88-201ENST00000355868 OSCARQ8IYS5 282 aa34.37■■■■□ 3.09
WDR88-201ENST00000355868 PRXQ9BXM0 1461 aa34.33■■■■□ 3.09
WDR88-201ENST00000355868 RAPGEF2Q9Y4G8 1499 aa34.25■■■■□ 3.07
WDR88-201ENST00000355868 CEP170Q5SW79 1584 aa34.23■■■■□ 3.07
WDR88-201ENST00000355868 NUP160Q12769 1436 aa34.22■■■■□ 3.07
WDR88-201ENST00000355868 CLASP1Q7Z460 1538 aa34.14■■■■□ 3.06
WDR88-201ENST00000355868 DNAJC5Q9H3Z4 198 aa34.11■■■■□ 3.05
WDR88-201ENST00000355868 KIF21BO75037 1637 aa34.05■■■■□ 3.04
WDR88-201ENST00000355868 EHMT2Q96KQ7 1210 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms