Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.42■□□□□ 0.38
SFTPBP07988 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.42■□□□□ 0.38
SFTPBP07988 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.42■□□□□ 0.38
SFTPBP07988 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.42■□□□□ 0.38
SFTPBP07988 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 AFG3L1P-217ENST00000557444 2447 ntBASIC17.42■□□□□ 0.38
SFTPBP07988 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.42■□□□□ 0.38
SFTPBP07988 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.42■□□□□ 0.38
SFTPBP07988 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SFTPBP07988 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SFTPBP07988 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SFTPBP07988 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SFTPBP07988 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.41■□□□□ 0.38
SFTPBP07988 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.41■□□□□ 0.38
SFTPBP07988 AL162377.1-201ENST00000618844 1793 ntBASIC17.41■□□□□ 0.38
SFTPBP07988 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.41■□□□□ 0.38
SFTPBP07988 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.41■□□□□ 0.38
SFTPBP07988 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 UBE2DNL-204ENST00000602536 740 ntBASIC17.41■□□□□ 0.38
SFTPBP07988 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.41■□□□□ 0.38
SFTPBP07988 AC073111.5-205ENST00000641717 521 ntBASIC17.41■□□□□ 0.38
SFTPBP07988 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SFTPBP07988 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.41■□□□□ 0.38
SFTPBP07988 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.41■□□□□ 0.38
SFTPBP07988 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SFTPBP07988 AC116050.2-201ENST00000612102 1779 ntBASIC17.4■□□□□ 0.38
SFTPBP07988 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 AC112907.3-201ENST00000577781 2400 ntBASIC17.4■□□□□ 0.38
SFTPBP07988 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SFTPBP07988 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.4■□□□□ 0.38
SFTPBP07988 KRT18P11-201ENST00000435214 1283 ntBASIC17.4■□□□□ 0.38
SFTPBP07988 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 AC011767.1-201ENST00000617410 1153 ntBASIC17.4■□□□□ 0.38
SFTPBP07988 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SFTPBP07988 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.4■□□□□ 0.38
SFTPBP07988 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SFTPBP07988 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.4■□□□□ 0.38
SFTPBP07988 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SFTPBP07988 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SFTPBP07988 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.39■□□□□ 0.38
SFTPBP07988 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.39■□□□□ 0.37
SFTPBP07988 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.39■□□□□ 0.37
SFTPBP07988 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SFTPBP07988 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SFTPBP07988 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.39■□□□□ 0.37
SFTPBP07988 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.39■□□□□ 0.37
SFTPBP07988 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.39■□□□□ 0.37
SFTPBP07988 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.39■□□□□ 0.37
SFTPBP07988 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.39■□□□□ 0.37
SFTPBP07988 KRT18P20-201ENST00000548986 1279 ntBASIC17.39■□□□□ 0.37
SFTPBP07988 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.39■□□□□ 0.37
SFTPBP07988 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
SFTPBP07988 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.39■□□□□ 0.37
SFTPBP07988 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SFTPBP07988 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SFTPBP07988 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms