RNA–Protein interactions for RNA: ENST00000423100.5

PTPA-214, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-214ENST00000423100 NISCHQ9Y2I1 1504 aa48.99■■■■■ 5.43
PTPA-214ENST00000423100 CCDC180Q9P1Z9 1646 aa43.28■■■■■ 4.52
PTPA-214ENST00000423100 ABCC9O60706 1549 aa41.57■■■■■ 4.25
PTPA-214ENST00000423100 ZCCHC6Q5VYS8 1495 aaKnown RBP41.02■■■■■ 4.16
PTPA-214ENST00000423100 DCAF1Q9Y4B6 1507 aa40.58■■■■■ 4.09
PTPA-214ENST00000423100 DCAF8L2P0C7V8 631 aa40.52■■■■■ 4.08
PTPA-214ENST00000423100 MYO15BQ96JP2 1530 aa40.47■■■■■ 4.07
PTPA-214ENST00000423100 NACADO15069 1562 aa40.46■■■■■ 4.07
PTPA-214ENST00000423100 RB1CC1Q8TDY2 1594 aa40.35■■■■■ 4.05
PTPA-214ENST00000423100 SCRIBQ14160 1630 aa39.56■■■■□ 3.92
PTPA-214ENST00000423100 UNC13AQ9UPW8 1703 aa39.45■■■■□ 3.91
PTPA-214ENST00000423100 SHROOM4Q9ULL8 1493 aa39.15■■■■□ 3.86
PTPA-214ENST00000423100 BICRAQ9NZM4 1560 aa39.08■■■■□ 3.85
PTPA-214ENST00000423100 PABPN1Q86U42 306 aaKnown RBP eCLIP38.9■■■■□ 3.82
PTPA-214ENST00000423100 CECR2Q9BXF3 1484 aa38.06■■■■□ 3.68
PTPA-214ENST00000423100 EIF4G1Q04637 1599 aaKnown RBP38.01■■■■□ 3.67
PTPA-214ENST00000423100 BAZ1AQ9NRL2 1556 aaPredicted RBP37.95■■■■□ 3.67
PTPA-214ENST00000423100 SMARCA4P51532 1647 aa37.89■■■■□ 3.66
PTPA-214ENST00000423100 MROH2BQ7Z745 1585 aa37.77■■■■□ 3.64
PTPA-214ENST00000423100 CC2D2AQ9P2K1 1620 aa37.65■■■■□ 3.62
PTPA-214ENST00000423100 RSF1Q96T23 1441 aaPredicted RBP37.59■■■■□ 3.61
PTPA-214ENST00000423100 PEG3Q9GZU2 1588 aa37.5■■■■□ 3.59
PTPA-214ENST00000423100 SMARCA2P51531 1590 aa37.47■■■■□ 3.59
PTPA-214ENST00000423100 ATAD2BQ9ULI0 1458 aa37.45■■■■□ 3.59
PTPA-214ENST00000423100 WIZO95785 1651 aa37.42■■■■□ 3.58
PTPA-214ENST00000423100 DNAJC5BQ9UF47 199 aa37.35■■■■□ 3.57
PTPA-214ENST00000423100 NCAPD3P42695 1498 aa37.28■■■■□ 3.56
PTPA-214ENST00000423100 HMGXB3Q12766 1538 aa37.26■■■■□ 3.55
PTPA-214ENST00000423100 BAZ1BQ9UIG0 1483 aaKnown RBP37.21■■■■□ 3.55
PTPA-214ENST00000423100 SUPT5HO00267 1087 aaKnown RBP37.17■■■■□ 3.54
PTPA-214ENST00000423100 TOP2AP11388 1531 aaKnown RBP37.1■■■■□ 3.53
PTPA-214ENST00000423100 CCDC88BA6NC98 1476 aa36.59■■■■□ 3.45
PTPA-214ENST00000423100 LAMC3Q9Y6N6 1575 aa36.24■■■■□ 3.39
PTPA-214ENST00000423100 CADPSQ9ULU8 1353 aa36.23■■■■□ 3.39
PTPA-214ENST00000423100 CFTRP13569 1480 aa36.21■■■■□ 3.39
PTPA-214ENST00000423100 NESP48681 1621 aa36.19■■■■□ 3.38
PTPA-214ENST00000423100 PRDM2Q13029 1718 aa36.08■■■■□ 3.37
PTPA-214ENST00000423100 PDS5BQ9NTI5 1447 aa35.92■■■■□ 3.34
PTPA-214ENST00000423100 FANCD2Q9BXW9 1451 aa35.87■■■■□ 3.33
PTPA-214ENST00000423100 KIF21AQ7Z4S6 1674 aa35.84■■■■□ 3.33
PTPA-214ENST00000423100 ERCC6Q03468 1493 aa35.8■■■■□ 3.32
PTPA-214ENST00000423100 CEP164Q9UPV0 1460 aa35.78■■■■□ 3.32
PTPA-214ENST00000423100 MRC2Q9UBG0 1479 aa35.56■■■■□ 3.28
PTPA-214ENST00000423100 THOC2Q8NI27 1593 aaKnown RBP35.55■■■■□ 3.28
PTPA-214ENST00000423100 ABCC8Q09428 1581 aa35.54■■■■□ 3.28
PTPA-214ENST00000423100 URB2Q14146 1524 aaKnown RBP35.47■■■■□ 3.27
PTPA-214ENST00000423100 WRNQ14191 1432 aaPredicted RBP eCLIP35.45■■■■□ 3.271e-6■■□□□ 12
PTPA-214ENST00000423100 DNMBPQ6XZF7 1577 aa35.44■■■■□ 3.26
PTPA-214ENST00000423100 WDR62O43379 1518 aa35.42■■■■□ 3.26
PTPA-214ENST00000423100 CUX1P39880 1505 aa35.4■■■■□ 3.26
PTPA-214ENST00000423100 TOPBP1Q92547 1522 aa35.38■■■■□ 3.25
PTPA-214ENST00000423100 SYNJ1O43426 1573 aa35.36■■■■□ 3.25
PTPA-214ENST00000423100 BIVM-ERCC5R4GMW8 1640 aa35.32■■■■□ 3.25
PTPA-214ENST00000423100 TOP2BQ02880 1626 aa35.32■■■■□ 3.24
PTPA-214ENST00000423100 FGD5Q6ZNL6 1462 aa35.17■■■■□ 3.22
PTPA-214ENST00000423100 POLA1P09884 1462 aaPredicted RBP35.14■■■■□ 3.22
PTPA-214ENST00000423100 CUX2O14529 1486 aa35.13■■■■□ 3.21
PTPA-214ENST00000423100 CHIC1Q5VXU3 224 aa35.11■■■■□ 3.21
PTPA-214ENST00000423100 TRIM41Q8WV44 630 aa35.06■■■■□ 3.2
PTPA-214ENST00000423100 IFT140Q96RY7 1462 aa34.97■■■■□ 3.19
PTPA-214ENST00000423100 SOGA1O94964 1423 aa34.96■■■■□ 3.19
PTPA-214ENST00000423100 RAD54L2Q9Y4B4 1467 aa34.95■■■■□ 3.19
PTPA-214ENST00000423100 TARBP1Q13395 1621 aaKnown RBP34.95■■■■□ 3.18
PTPA-214ENST00000423100 WDR97A6NE52 1622 aa34.9■■■■□ 3.18
PTPA-214ENST00000423100 ABCA10Q8WWZ4 1543 aa34.86■■■■□ 3.17
PTPA-214ENST00000423100 ZNF608Q9ULD9 1512 aaPredicted RBP34.74■■■■□ 3.15
PTPA-214ENST00000423100 EIF4G3O43432 1585 aaKnown RBP34.71■■■■□ 3.15
PTPA-214ENST00000423100 ABCA5Q8WWZ7 1642 aa34.7■■■■□ 3.14
PTPA-214ENST00000423100 TDRD9Q8NDG6 1382 aaKnown RBP34.66■■■■□ 3.14
PTPA-214ENST00000423100 KIF27Q86VH2 1401 aa34.64■■■■□ 3.14
PTPA-214ENST00000423100 AQRO60306 1485 aaKnown RBP eCLIP34.61■■■■□ 3.133e-7■■■■■ 30.5
PTPA-214ENST00000423100 GAPVD1Q14C86 1478 aa34.59■■■■□ 3.13
PTPA-214ENST00000423100 PBRM1Q86U86 1689 aa34.55■■■■□ 3.12
PTPA-214ENST00000423100 RUSC2Q8N2Y8 1516 aa34.54■■■■□ 3.12
PTPA-214ENST00000423100 GRIN2BQ13224 1484 aa34.5■■■■□ 3.11
PTPA-214ENST00000423100 EEA1Q15075 1411 aa34.49■■■■□ 3.11
PTPA-214ENST00000423100 ERICH3Q5RHP9 1530 aa34.46■■■■□ 3.11
PTPA-214ENST00000423100 SNAPC4Q5SXM2 1469 aa34.38■■■■□ 3.09
PTPA-214ENST00000423100 IGF1RP08069 1367 aa34.35■■■■□ 3.09
PTPA-214ENST00000423100 MAGI1Q96QZ7 1491 aaPredicted RBP34.34■■■■□ 3.09
PTPA-214ENST00000423100 CUL7Q14999 1698 aa34.34■■■■□ 3.09
PTPA-214ENST00000423100 FAM9AQ8IZU1 332 aaPredicted RBP34.33■■■■□ 3.09
PTPA-214ENST00000423100 ADAMTS12P58397 1594 aa34.32■■■■□ 3.09
PTPA-214ENST00000423100 CSRNP3Q8WYN3 585 aa34.25■■■■□ 3.07
PTPA-214ENST00000423100 FHAD1B1AJZ9 1412 aa34.23■■■■□ 3.07
PTPA-214ENST00000423100 SYNJ2O15056 1496 aa34.2■■■■□ 3.06
PTPA-214ENST00000423100 CARMIL1Q5VZK9 1371 aa34.18■■■■□ 3.06
PTPA-214ENST00000423100 PRXQ9BXM0 1461 aa34.16■■■■□ 3.06
PTPA-214ENST00000423100 KIF21BO75037 1637 aa34.12■■■■□ 3.05
PTPA-214ENST00000423100 CHD1O14646 1710 aa34.1■■■■□ 3.05
PTPA-214ENST00000423100 RAPGEF2Q9Y4G8 1499 aa34.1■■■■□ 3.05
PTPA-214ENST00000423100 GRIN2AQ12879 1464 aa34.07■■■■□ 3.04
PTPA-214ENST00000423100 CHMP7Q8WUX9 453 aaPredicted RBP34.04■■■■□ 3.04
PTPA-214ENST00000423100 FBLN2P98095 1184 aa34.02■■■■□ 3.04
PTPA-214ENST00000423100 GOLGA3Q08378 1498 aa33.96■■■■□ 3.03
PTPA-214ENST00000423100 CEP170Q5SW79 1584 aa33.89■■■■□ 3.02
PTPA-214ENST00000423100 NUP160Q12769 1436 aa33.87■■■■□ 3.01
PTPA-214ENST00000423100 EHMT2Q96KQ7 1210 aa33.84■■■■□ 3.01
PTPA-214ENST00000423100 CTTNBP2Q8WZ74 1663 aa33.81■■■■□ 3
PTPA-214ENST00000423100 CLASP1Q7Z460 1538 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms