RNA–Protein interactions for RNA: ENST00000329966.10

USP45-202, Transcript of ubiquitin specific peptidase 45, humanhuman

TSL 1 (best) BASIC

Gene USP45, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP45-202ENST00000329966 NISCHQ9Y2I1 1504 aa51.14■■■■■ 5.78
USP45-202ENST00000329966 CCDC180Q9P1Z9 1646 aa45.29■■■■■ 4.84
USP45-202ENST00000329966 ABCC9O60706 1549 aa44.4■■■■■ 4.7
USP45-202ENST00000329966 DCAF8L2P0C7V8 631 aa42.75■■■■■ 4.43
USP45-202ENST00000329966 ZCCHC6Q5VYS8 1495 aaKnown RBP42.62■■■■■ 4.41
USP45-202ENST00000329966 RB1CC1Q8TDY2 1594 aa42.61■■■■■ 4.41
USP45-202ENST00000329966 NACADO15069 1562 aa42.59■■■■■ 4.41
USP45-202ENST00000329966 MYO15BQ96JP2 1530 aa42.34■■■■■ 4.37
USP45-202ENST00000329966 DCAF1Q9Y4B6 1507 aa42.24■■■■■ 4.35
USP45-202ENST00000329966 UNC13AQ9UPW8 1703 aa41.7■■■■■ 4.27
USP45-202ENST00000329966 PABPN1Q86U42 306 aaKnown RBP eCLIP41.57■■■■■ 4.25
USP45-202ENST00000329966 SCRIBQ14160 1630 aa41.47■■■■■ 4.23
USP45-202ENST00000329966 BICRAQ9NZM4 1560 aa41.45■■■■■ 4.23
USP45-202ENST00000329966 SHROOM4Q9ULL8 1493 aa40.82■■■■■ 4.13
USP45-202ENST00000329966 DNAJC5BQ9UF47 199 aa40.77■■■■■ 4.12
USP45-202ENST00000329966 EIF4G1Q04637 1599 aaKnown RBP40.29■■■■■ 4.04
USP45-202ENST00000329966 CC2D2AQ9P2K1 1620 aa40.11■■■■■ 4.01
USP45-202ENST00000329966 CECR2Q9BXF3 1484 aa39.92■■■■□ 3.98
USP45-202ENST00000329966 SMARCA4P51532 1647 aa39.64■■■■□ 3.94
USP45-202ENST00000329966 BAZ1AQ9NRL2 1556 aaPredicted RBP39.56■■■■□ 3.92
USP45-202ENST00000329966 MROH2BQ7Z745 1585 aa39.47■■■■□ 3.91
USP45-202ENST00000329966 ATAD2BQ9ULI0 1458 aa39.43■■■■□ 3.9
USP45-202ENST00000329966 NCAPD3P42695 1498 aa39.36■■■■□ 3.89
USP45-202ENST00000329966 SMARCA2P51531 1590 aa39.29■■■■□ 3.88
USP45-202ENST00000329966 PEG3Q9GZU2 1588 aa39.21■■■■□ 3.87
USP45-202ENST00000329966 HMGXB3Q12766 1538 aa39.13■■■■□ 3.85
USP45-202ENST00000329966 BAZ1BQ9UIG0 1483 aaKnown RBP39.07■■■■□ 3.84
USP45-202ENST00000329966 RSF1Q96T23 1441 aaPredicted RBP39.05■■■■□ 3.84
USP45-202ENST00000329966 WIZO95785 1651 aa39.03■■■■□ 3.84
USP45-202ENST00000329966 TOP2AP11388 1531 aaKnown RBP38.56■■■■□ 3.76
USP45-202ENST00000329966 NESP48681 1621 aa38.49■■■■□ 3.75
USP45-202ENST00000329966 LAMC3Q9Y6N6 1575 aa38.24■■■■□ 3.71
USP45-202ENST00000329966 CADPSQ9ULU8 1353 aa38.23■■■■□ 3.71
USP45-202ENST00000329966 SUPT5HO00267 1087 aaKnown RBP38.19■■■■□ 3.7
USP45-202ENST00000329966 CCDC88BA6NC98 1476 aa38.18■■■■□ 3.7
USP45-202ENST00000329966 ERCC6Q03468 1493 aa38.18■■■■□ 3.7
USP45-202ENST00000329966 CFTRP13569 1480 aa38.03■■■■□ 3.68
USP45-202ENST00000329966 PDS5BQ9NTI5 1447 aa37.99■■■■□ 3.67
USP45-202ENST00000329966 KIF21AQ7Z4S6 1674 aa37.94■■■■□ 3.66
USP45-202ENST00000329966 FANCD2Q9BXW9 1451 aa37.8■■■■□ 3.64
USP45-202ENST00000329966 THOC2Q8NI27 1593 aaKnown RBP37.79■■■■□ 3.64
USP45-202ENST00000329966 CEP164Q9UPV0 1460 aa37.7■■■■□ 3.63
USP45-202ENST00000329966 CUX2O14529 1486 aa37.69■■■■□ 3.62
USP45-202ENST00000329966 MRC2Q9UBG0 1479 aa37.64■■■■□ 3.62
USP45-202ENST00000329966 PRDM2Q13029 1718 aa37.62■■■■□ 3.61
USP45-202ENST00000329966 WDR62O43379 1518 aa37.51■■■■□ 3.59
USP45-202ENST00000329966 URB2Q14146 1524 aaKnown RBP37.46■■■■□ 3.59
USP45-202ENST00000329966 TOPBP1Q92547 1522 aa37.21■■■■□ 3.55
USP45-202ENST00000329966 DNMBPQ6XZF7 1577 aa37.14■■■■□ 3.54
USP45-202ENST00000329966 ABCC8Q09428 1581 aa37.09■■■■□ 3.53
USP45-202ENST00000329966 CUX1P39880 1505 aa37.01■■■■□ 3.51
USP45-202ENST00000329966 POLA1P09884 1462 aaPredicted RBP36.92■■■■□ 3.5
USP45-202ENST00000329966 IFT140Q96RY7 1462 aa36.91■■■■□ 3.5
USP45-202ENST00000329966 ZNF608Q9ULD9 1512 aaPredicted RBP36.85■■■■□ 3.49
USP45-202ENST00000329966 FGD5Q6ZNL6 1462 aa36.84■■■■□ 3.49
USP45-202ENST00000329966 RAD54L2Q9Y4B4 1467 aa36.81■■■■□ 3.48
USP45-202ENST00000329966 TARBP1Q13395 1621 aaKnown RBP36.8■■■■□ 3.48
USP45-202ENST00000329966 WRNQ14191 1432 aaPredicted RBP eCLIP36.76■■■■□ 3.48
USP45-202ENST00000329966 SOGA1O94964 1423 aa36.75■■■■□ 3.47
USP45-202ENST00000329966 SYNJ1O43426 1573 aa36.72■■■■□ 3.47
USP45-202ENST00000329966 TOP2BQ02880 1626 aa36.65■■■■□ 3.46
USP45-202ENST00000329966 AQRO60306 1485 aaKnown RBP eCLIP36.64■■■■□ 3.46
USP45-202ENST00000329966 BIVM-ERCC5R4GMW8 1640 aa36.62■■■■□ 3.45
USP45-202ENST00000329966 EIF4G3O43432 1585 aaKnown RBP36.61■■■■□ 3.45
USP45-202ENST00000329966 TDRD9Q8NDG6 1382 aaKnown RBP36.6■■■■□ 3.45
USP45-202ENST00000329966 DNAJC5Q9H3Z4 198 aa36.51■■■■□ 3.44
USP45-202ENST00000329966 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
USP45-202ENST00000329966 ABCA10Q8WWZ4 1543 aa36.45■■■■□ 3.43
USP45-202ENST00000329966 GAPVD1Q14C86 1478 aa36.31■■■■□ 3.4
USP45-202ENST00000329966 ABCA5Q8WWZ7 1642 aa36.29■■■■□ 3.4
USP45-202ENST00000329966 GRIN2BQ13224 1484 aa36.28■■■■□ 3.4
USP45-202ENST00000329966 SNAPC4Q5SXM2 1469 aa36.26■■■■□ 3.39
USP45-202ENST00000329966 OSCARQ8IYS5 282 aa36.2■■■■□ 3.39
USP45-202ENST00000329966 PBRM1Q86U86 1689 aa36.19■■■■□ 3.38
USP45-202ENST00000329966 FBLN2P98095 1184 aa36.15■■■■□ 3.38
USP45-202ENST00000329966 MAGI1Q96QZ7 1491 aaPredicted RBP36.14■■■■□ 3.38
USP45-202ENST00000329966 CHD1O14646 1710 aa36.12■■■■□ 3.37
USP45-202ENST00000329966 SYNJ2O15056 1496 aa36.03■■■■□ 3.36
USP45-202ENST00000329966 CHMP7Q8WUX9 453 aaPredicted RBP36.03■■■■□ 3.36
USP45-202ENST00000329966 ERICH3Q5RHP9 1530 aa35.98■■■■□ 3.35
USP45-202ENST00000329966 TRIM41Q8WV44 630 aa35.98■■■■□ 3.35
USP45-202ENST00000329966 KIF27Q86VH2 1401 aa35.95■■■■□ 3.35
USP45-202ENST00000329966 ADAMTS12P58397 1594 aa35.95■■■■□ 3.35
USP45-202ENST00000329966 FHAD1B1AJZ9 1412 aa35.89■■■■□ 3.34
USP45-202ENST00000329966 IGF1RP08069 1367 aa35.88■■■■□ 3.33
USP45-202ENST00000329966 GRIN2AQ12879 1464 aa35.83■■■■□ 3.33
USP45-202ENST00000329966 RUSC2Q8N2Y8 1516 aa35.82■■■■□ 3.33
USP45-202ENST00000329966 CLASP1Q7Z460 1538 aa35.76■■■■□ 3.31
USP45-202ENST00000329966 CHIC1Q5VXU3 224 aa35.7■■■■□ 3.31
USP45-202ENST00000329966 NUP160Q12769 1436 aa35.68■■■■□ 3.3
USP45-202ENST00000329966 CEP170Q5SW79 1584 aa35.68■■■■□ 3.3
USP45-202ENST00000329966 ARHGEF11O15085 1522 aa35.65■■■■□ 3.3
USP45-202ENST00000329966 CARMIL1Q5VZK9 1371 aa35.63■■■■□ 3.29
USP45-202ENST00000329966 CUL7Q14999 1698 aa35.63■■■■□ 3.29
USP45-202ENST00000329966 RIMBP3CA6NJZ7 1639 aa35.62■■■■□ 3.29
USP45-202ENST00000329966 RIMBP3BA6NNM3 1639 aa35.62■■■■□ 3.29
USP45-202ENST00000329966 RIMBP3Q9UFD9 1639 aa35.62■■■■□ 3.29
USP45-202ENST00000329966 ARAP1Q96P48 1450 aa35.4■■■■□ 3.26
USP45-202ENST00000329966 RAPGEF2Q9Y4G8 1499 aa35.4■■■■□ 3.26
USP45-202ENST00000329966 ERCC6L2Q5T890 1561 aa35.38■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms