RNA–Protein interactions for RNA: ENST00000311445.6

CNIH2-201, Transcript of cornichon family AMPA receptor auxiliary protein 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNIH2, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH2-201ENST00000311445 NISCHQ9Y2I1 1504 aa51.71■■■■■ 5.87
CNIH2-201ENST00000311445 CCDC180Q9P1Z9 1646 aa46.13■■■■■ 4.98
CNIH2-201ENST00000311445 ABCC9O60706 1549 aa45.61■■■■■ 4.89
CNIH2-201ENST00000311445 RB1CC1Q8TDY2 1594 aa43.61■■■■■ 4.57
CNIH2-201ENST00000311445 NACADO15069 1562 aa43.47■■■■■ 4.55
CNIH2-201ENST00000311445 DCAF8L2P0C7V8 631 aa43.35■■■■■ 4.53
CNIH2-201ENST00000311445 MYO15BQ96JP2 1530 aa43.06■■■■■ 4.48
CNIH2-201ENST00000311445 ZCCHC6Q5VYS8 1495 aaKnown RBP42.99■■■■■ 4.47
CNIH2-201ENST00000311445 UNC13AQ9UPW8 1703 aa42.74■■■■■ 4.43
CNIH2-201ENST00000311445 DCAF1Q9Y4B6 1507 aa42.72■■■■■ 4.43
CNIH2-201ENST00000311445 PABPN1Q86U42 306 aaKnown RBP eCLIP42.56■■■■■ 4.4
CNIH2-201ENST00000311445 BICRAQ9NZM4 1560 aa42.42■■■■■ 4.38
CNIH2-201ENST00000311445 DNAJC5BQ9UF47 199 aa42.35■■■■■ 4.37
CNIH2-201ENST00000311445 SCRIBQ14160 1630 aa42.1■■■■■ 4.33
CNIH2-201ENST00000311445 SHROOM4Q9ULL8 1493 aa41.78■■■■■ 4.28
CNIH2-201ENST00000311445 EIF4G1Q04637 1599 aaKnown RBP41.29■■■■■ 4.2
CNIH2-201ENST00000311445 CC2D2AQ9P2K1 1620 aa41.24■■■■■ 4.19
CNIH2-201ENST00000311445 CECR2Q9BXF3 1484 aa41.01■■■■■ 4.16
CNIH2-201ENST00000311445 SMARCA4P51532 1647 aa40.23■■■■■ 4.03
CNIH2-201ENST00000311445 NCAPD3P42695 1498 aa40.14■■■■■ 4.02
CNIH2-201ENST00000311445 ATAD2BQ9ULI0 1458 aa40.12■■■■■ 4.01
CNIH2-201ENST00000311445 BAZ1AQ9NRL2 1556 aaPredicted RBP40.07■■■■■ 4.01
CNIH2-201ENST00000311445 SMARCA2P51531 1590 aa39.99■■■■□ 3.99
CNIH2-201ENST00000311445 HMGXB3Q12766 1538 aa39.89■■■■□ 3.98
CNIH2-201ENST00000311445 MROH2BQ7Z745 1585 aa39.88■■■■□ 3.97
CNIH2-201ENST00000311445 PEG3Q9GZU2 1588 aa39.82■■■■□ 3.97
CNIH2-201ENST00000311445 BAZ1BQ9UIG0 1483 aaKnown RBP39.72■■■■□ 3.95
CNIH2-201ENST00000311445 WIZO95785 1651 aa39.44■■■■□ 3.9
CNIH2-201ENST00000311445 NESP48681 1621 aa39.38■■■■□ 3.9
CNIH2-201ENST00000311445 ERCC6Q03468 1493 aa39.27■■■■□ 3.88
CNIH2-201ENST00000311445 RSF1Q96T23 1441 aaPredicted RBP39.25■■■■□ 3.87
CNIH2-201ENST00000311445 LAMC3Q9Y6N6 1575 aa39.12■■■■□ 3.85
CNIH2-201ENST00000311445 CUX2O14529 1486 aa39.02■■■■□ 3.84
CNIH2-201ENST00000311445 TOP2AP11388 1531 aaKnown RBP38.93■■■■□ 3.82
CNIH2-201ENST00000311445 CADPSQ9ULU8 1353 aa38.93■■■■□ 3.82
CNIH2-201ENST00000311445 KIF21AQ7Z4S6 1674 aa38.88■■■■□ 3.82
CNIH2-201ENST00000311445 THOC2Q8NI27 1593 aaKnown RBP38.85■■■■□ 3.81
CNIH2-201ENST00000311445 PDS5BQ9NTI5 1447 aa38.84■■■■□ 3.81
CNIH2-201ENST00000311445 CFTRP13569 1480 aa38.63■■■■□ 3.78
CNIH2-201ENST00000311445 CCDC88BA6NC98 1476 aa38.51■■■■□ 3.76
CNIH2-201ENST00000311445 MRC2Q9UBG0 1479 aa38.51■■■■□ 3.76
CNIH2-201ENST00000311445 FANCD2Q9BXW9 1451 aa38.5■■■■□ 3.75
CNIH2-201ENST00000311445 CEP164Q9UPV0 1460 aa38.47■■■■□ 3.75
CNIH2-201ENST00000311445 WDR62O43379 1518 aa38.43■■■■□ 3.74
CNIH2-201ENST00000311445 DNAJC5Q9H3Z4 198 aa38.39■■■■□ 3.74
CNIH2-201ENST00000311445 PRDM2Q13029 1718 aa38.3■■■■□ 3.72
CNIH2-201ENST00000311445 URB2Q14146 1524 aaKnown RBP38.19■■■■□ 3.7
CNIH2-201ENST00000311445 SUPT5HO00267 1087 aaKnown RBP38.06■■■■□ 3.68
CNIH2-201ENST00000311445 TOPBP1Q92547 1522 aa37.86■■■■□ 3.65
CNIH2-201ENST00000311445 DNMBPQ6XZF7 1577 aa37.75■■■■□ 3.63
CNIH2-201ENST00000311445 ABCC8Q09428 1581 aa37.74■■■■□ 3.63
CNIH2-201ENST00000311445 IFT140Q96RY7 1462 aa37.68■■■■□ 3.62
CNIH2-201ENST00000311445 ZNF608Q9ULD9 1512 aaPredicted RBP37.63■■■■□ 3.61
CNIH2-201ENST00000311445 POLA1P09884 1462 aaPredicted RBP37.5■■■■□ 3.59
CNIH2-201ENST00000311445 TARBP1Q13395 1621 aaKnown RBP37.5■■■■□ 3.59
CNIH2-201ENST00000311445 CUX1P39880 1505 aa37.44■■■■□ 3.58
CNIH2-201ENST00000311445 EIF4G3O43432 1585 aaKnown RBP37.43■■■■□ 3.58
CNIH2-201ENST00000311445 RAD54L2Q9Y4B4 1467 aa37.38■■■■□ 3.57
CNIH2-201ENST00000311445 FGD5Q6ZNL6 1462 aa37.35■■■■□ 3.57
CNIH2-201ENST00000311445 AQRO60306 1485 aaKnown RBP eCLIP37.34■■■■□ 3.57
CNIH2-201ENST00000311445 OSCARQ8IYS5 282 aa37.33■■■■□ 3.57
CNIH2-201ENST00000311445 SOGA1O94964 1423 aa37.31■■■■□ 3.56
CNIH2-201ENST00000311445 TDRD9Q8NDG6 1382 aaKnown RBP37.2■■■■□ 3.55
CNIH2-201ENST00000311445 WDR97A6NE52 1622 aa37.09■■■■□ 3.53
CNIH2-201ENST00000311445 CHD1O14646 1710 aa37.06■■■■□ 3.52
CNIH2-201ENST00000311445 WRNQ14191 1432 aaPredicted RBP eCLIP36.98■■■■□ 3.51
CNIH2-201ENST00000311445 SYNJ1O43426 1573 aa36.97■■■■□ 3.51
CNIH2-201ENST00000311445 BIVM-ERCC5R4GMW8 1640 aa36.97■■■■□ 3.51
CNIH2-201ENST00000311445 TOP2BQ02880 1626 aa36.96■■■■□ 3.51
CNIH2-201ENST00000311445 SNAPC4Q5SXM2 1469 aa36.96■■■■□ 3.51
CNIH2-201ENST00000311445 ABCA10Q8WWZ4 1543 aa36.95■■■■□ 3.51
CNIH2-201ENST00000311445 TRIM41Q8WV44 630 aa36.92■■■■□ 3.5
CNIH2-201ENST00000311445 GRIN2BQ13224 1484 aa36.92■■■■□ 3.5
CNIH2-201ENST00000311445 FBLN2P98095 1184 aa36.91■■■■□ 3.5
CNIH2-201ENST00000311445 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.49
CNIH2-201ENST00000311445 ABCA5Q8WWZ7 1642 aa36.87■■■■□ 3.49
CNIH2-201ENST00000311445 MAGI1Q96QZ7 1491 aaPredicted RBP36.85■■■■□ 3.49
CNIH2-201ENST00000311445 PBRM1Q86U86 1689 aa36.85■■■■□ 3.49
CNIH2-201ENST00000311445 RIMBP3CA6NJZ7 1639 aa36.84■■■■□ 3.49
CNIH2-201ENST00000311445 RIMBP3BA6NNM3 1639 aa36.84■■■■□ 3.49
CNIH2-201ENST00000311445 RIMBP3Q9UFD9 1639 aa36.84■■■■□ 3.49
CNIH2-201ENST00000311445 ARHGEF11O15085 1522 aa36.77■■■■□ 3.48
CNIH2-201ENST00000311445 SYNJ2O15056 1496 aa36.73■■■■□ 3.47
CNIH2-201ENST00000311445 CHMP7Q8WUX9 453 aaPredicted RBP36.73■■■■□ 3.47
CNIH2-201ENST00000311445 CLASP1Q7Z460 1538 aa36.64■■■■□ 3.46
CNIH2-201ENST00000311445 ADAMTS12P58397 1594 aa36.53■■■■□ 3.44
CNIH2-201ENST00000311445 ERICH3Q5RHP9 1530 aa36.48■■■■□ 3.43
CNIH2-201ENST00000311445 ARAP1Q96P48 1450 aa36.47■■■■□ 3.43
CNIH2-201ENST00000311445 GRIN2AQ12879 1464 aa36.46■■■■□ 3.43
CNIH2-201ENST00000311445 CYB5RLQ6IPT4 315 aa36.44■■■■□ 3.42
CNIH2-201ENST00000311445 FHAD1B1AJZ9 1412 aa36.42■■■■□ 3.42
CNIH2-201ENST00000311445 CEP170Q5SW79 1584 aa36.34■■■■□ 3.41
CNIH2-201ENST00000311445 NUP160Q12769 1436 aa36.33■■■■□ 3.41
CNIH2-201ENST00000311445 KIF27Q86VH2 1401 aa36.21■■■■□ 3.39
CNIH2-201ENST00000311445 IGF1RP08069 1367 aa36.18■■■■□ 3.38
CNIH2-201ENST00000311445 ERCC6L2Q5T890 1561 aa36.16■■■■□ 3.38
CNIH2-201ENST00000311445 SHROOM2Q13796 1616 aa36.12■■■■□ 3.37
CNIH2-201ENST00000311445 CUL7Q14999 1698 aa36.05■■■■□ 3.36
CNIH2-201ENST00000311445 RUSC2Q8N2Y8 1516 aa36.01■■■■□ 3.36
CNIH2-201ENST00000311445 JPH4Q96JJ6 628 aa35.94■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms