RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 DCAF8L2P0C7V8 631 aa33.05■■■□□ 2.88
AC008878.3-201ENST00000617428 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
AC008878.3-201ENST00000617428 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
AC008878.3-201ENST00000617428 SHROOM4Q9ULL8 1493 aa30.54■■■□□ 2.48
AC008878.3-201ENST00000617428 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
AC008878.3-201ENST00000617428 APLP2Q06481 763 aa29.36■■■□□ 2.29
AC008878.3-201ENST00000617428 FAM9AQ8IZU1 332 aaPredicted RBP29.31■■■□□ 2.28
AC008878.3-201ENST00000617428 TTBK1Q5TCY1 1321 aaPredicted RBP28.97■■■□□ 2.23
AC008878.3-201ENST00000617428 RANGAP1P46060 587 aaPredicted RBP28.87■■■□□ 2.21
AC008878.3-201ENST00000617428 TRIM41Q8WV44 630 aa28.69■■■□□ 2.18
AC008878.3-201ENST00000617428 ATP1B4Q9UN42 357 aaPredicted RBP28.59■■■□□ 2.17
AC008878.3-201ENST00000617428 PCGF6Q9BYE7 350 aa28.54■■■□□ 2.16
AC008878.3-201ENST00000617428 PELP1Q8IZL8 1130 aaKnown RBP28.45■■■□□ 2.14
AC008878.3-201ENST00000617428 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
AC008878.3-201ENST00000617428 CCER1Q8TC90 406 aaPredicted RBP28.12■■■□□ 2.09
AC008878.3-201ENST00000617428 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
AC008878.3-201ENST00000617428 ZEB1P37275 1124 aaPredicted RBP27.84■■■□□ 2.05
AC008878.3-201ENST00000617428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.68■■■□□ 2.02
AC008878.3-201ENST00000617428 HNRNPUL2Q1KMD3 747 aaKnown RBP27.68■■■□□ 2.02
AC008878.3-201ENST00000617428 CENPBP07199 599 aaPredicted RBP27.65■■■□□ 2.02
AC008878.3-201ENST00000617428 MYT1LQ9UL68 1186 aa27.58■■■□□ 2.01
AC008878.3-201ENST00000617428 ITGAEP38570 1179 aa27.52■■■□□ 2
AC008878.3-201ENST00000617428 PABPN1Q86U42 306 aaKnown RBP eCLIP27.4■■□□□ 1.98
AC008878.3-201ENST00000617428 LOC105371045A0A1W2PR82 267 aa27.38■■□□□ 1.97
AC008878.3-201ENST00000617428 ABCC9O60706 1549 aa27.37■■□□□ 1.97
AC008878.3-201ENST00000617428 YTHDC1Q96MU7 727 aaKnown RBP27.34■■□□□ 1.97
AC008878.3-201ENST00000617428 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
AC008878.3-201ENST00000617428 TRIM26Q12899 539 aaPredicted RBP27.29■■□□□ 1.96
AC008878.3-201ENST00000617428 ERICH6Q7L0X2 663 aa27.28■■□□□ 1.96
AC008878.3-201ENST00000617428 NEFLP07196 543 aa27.24■■□□□ 1.95
AC008878.3-201ENST00000617428 POLR3GLQ9BT43 218 aa27.19■■□□□ 1.94
AC008878.3-201ENST00000617428 CNGB1Q14028 1251 aaPredicted RBP26.97■■□□□ 1.91
AC008878.3-201ENST00000617428 HRCP23327 699 aa26.82■■□□□ 1.88
AC008878.3-201ENST00000617428 FAM50AQ14320 339 aaKnown RBP26.79■■□□□ 1.88
AC008878.3-201ENST00000617428 FBLN2P98095 1184 aa26.77■■□□□ 1.88
AC008878.3-201ENST00000617428 SLC4A1APQ9BWU0 796 aaKnown RBP26.75■■□□□ 1.87
AC008878.3-201ENST00000617428 TRIM52Q96A61 297 aa26.64■■□□□ 1.85
AC008878.3-201ENST00000617428 NEUROD1Q13562 356 aa26.45■■□□□ 1.82
AC008878.3-201ENST00000617428 DAXXQ9UER7 740 aaPredicted RBP26.41■■□□□ 1.82
AC008878.3-201ENST00000617428 ARID3CA6NKF2 412 aa26.39■■□□□ 1.82
AC008878.3-201ENST00000617428 P3H3Q8IVL6 736 aa26.39■■□□□ 1.82
AC008878.3-201ENST00000617428 ZNF326Q5BKZ1 582 aaKnown RBP26.35■■□□□ 1.81
AC008878.3-201ENST00000617428 DIEXFQ68CQ4 756 aaKnown RBP26.26■■□□□ 1.79
AC008878.3-201ENST00000617428 CSRNP3Q8WYN3 585 aa26.25■■□□□ 1.79
AC008878.3-201ENST00000617428 ZNF777Q9ULD5 760 aaPredicted RBP26.12■■□□□ 1.77
AC008878.3-201ENST00000617428 CLSPNQ9HAW4 1339 aa26.11■■□□□ 1.77
AC008878.3-201ENST00000617428 SCRIBQ14160 1630 aa26.07■■□□□ 1.76
AC008878.3-201ENST00000617428 BCANQ96GW7 911 aa26.06■■□□□ 1.76
AC008878.3-201ENST00000617428 CDK11AQ9UQ88 783 aaPredicted RBP26■■□□□ 1.75
AC008878.3-201ENST00000617428 ANP32CO43423 234 aa25.94■■□□□ 1.74
AC008878.3-201ENST00000617428 SLC24A1O60721 1099 aa25.84■■□□□ 1.73
AC008878.3-201ENST00000617428 ESF1Q9H501 851 aaKnown RBP25.84■■□□□ 1.73
AC008878.3-201ENST00000617428 NPM1P06748 294 aaKnown RBP eCLIP25.82■■□□□ 1.72
AC008878.3-201ENST00000617428 ZNF316A6NFI3 1004 aaPredicted RBP25.77■■□□□ 1.72
AC008878.3-201ENST00000617428 PLPPR3Q6T4P5 718 aa25.73■■□□□ 1.71
AC008878.3-201ENST00000617428 CHGAP10645 457 aaKnown RBP25.73■■□□□ 1.71
AC008878.3-201ENST00000617428 NEFMP07197 916 aa25.7■■□□□ 1.7
AC008878.3-201ENST00000617428 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
AC008878.3-201ENST00000617428 ZBTB47Q9UFB7 747 aaPredicted RBP25.69■■□□□ 1.7
AC008878.3-201ENST00000617428 BCL11AQ9H165 835 aa25.68■■□□□ 1.7
AC008878.3-201ENST00000617428 STAG3Q9UJ98 1225 aa25.67■■□□□ 1.7
AC008878.3-201ENST00000617428 CANXP27824 592 aaKnown RBP25.61■■□□□ 1.69
AC008878.3-201ENST00000617428 MYT1Q01538 1121 aa25.61■■□□□ 1.69
AC008878.3-201ENST00000617428 RTL5Q5HYW3 569 aaPredicted RBP25.58■■□□□ 1.69
AC008878.3-201ENST00000617428 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
AC008878.3-201ENST00000617428 CHIC2Q9UKJ5 165 aa25.57■■□□□ 1.68
AC008878.3-201ENST00000617428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.53■■□□□ 1.68
AC008878.3-201ENST00000617428 TONSLQ96HA7 1378 aa25.49■■□□□ 1.67
AC008878.3-201ENST00000617428 GTF3C3Q9Y5Q9 886 aa25.47■■□□□ 1.67
AC008878.3-201ENST00000617428 TSPY4P0CV99 314 aa25.45■■□□□ 1.66
AC008878.3-201ENST00000617428 TSPY10P0CW01 314 aa25.45■■□□□ 1.66
AC008878.3-201ENST00000617428 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
AC008878.3-201ENST00000617428 KCNH8Q96L42 1107 aa25.29■■□□□ 1.64
AC008878.3-201ENST00000617428 KDM2AQ9Y2K7 1162 aa25.28■■□□□ 1.64
AC008878.3-201ENST00000617428 DDX10Q13206 875 aaKnown RBP25.27■■□□□ 1.64
AC008878.3-201ENST00000617428 RB1CC1Q8TDY2 1594 aa25.25■■□□□ 1.63
AC008878.3-201ENST00000617428 CCDC180Q9P1Z9 1646 aa25.22■■□□□ 1.63
AC008878.3-201ENST00000617428 SALL2Q9Y467 1007 aaPredicted RBP25.21■■□□□ 1.63
AC008878.3-201ENST00000617428 FAM9BQ8IZU0 186 aa25.2■■□□□ 1.62
AC008878.3-201ENST00000617428 CLIP1P30622 1438 aa25.18■■□□□ 1.62
AC008878.3-201ENST00000617428 PLEKHD1A6NEE1 506 aa25.16■■□□□ 1.62
AC008878.3-201ENST00000617428 HNRNPUQ00839 825 aaKnown RBP eCLIP25.16■■□□□ 1.62
AC008878.3-201ENST00000617428 SENP3Q9H4L4 574 aaPredicted RBP25.15■■□□□ 1.62
AC008878.3-201ENST00000617428 RRP7BPQ9NSQ0 103 aa25.14■■□□□ 1.62
AC008878.3-201ENST00000617428 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
AC008878.3-201ENST00000617428 TMC1Q8TDI8 760 aa25.1■■□□□ 1.61
AC008878.3-201ENST00000617428 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
AC008878.3-201ENST00000617428 SCAF1Q9H7N4 1312 aaKnown RBP25.05■■□□□ 1.6
AC008878.3-201ENST00000617428 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
AC008878.3-201ENST00000617428 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
AC008878.3-201ENST00000617428 HIRIP3Q9BW71 556 aaPredicted RBP25.02■■□□□ 1.6
AC008878.3-201ENST00000617428 NPM2Q86SE8 214 aaKnown RBP25■■□□□ 1.59
AC008878.3-201ENST00000617428 PPP1R15AO75807 674 aaPredicted RBP25■■□□□ 1.59
AC008878.3-201ENST00000617428 WRNQ14191 1432 aaPredicted RBP eCLIP24.99■■□□□ 1.59
AC008878.3-201ENST00000617428 PLEKHG5O94827 1062 aa24.98■■□□□ 1.59
AC008878.3-201ENST00000617428 FKBP8Q14318 412 aa24.98■■□□□ 1.59
AC008878.3-201ENST00000617428 WDR43Q15061 677 aaKnown RBP eCLIP24.96■■□□□ 1.59
AC008878.3-201ENST00000617428 RGL3Q3MIN7 710 aa24.96■■□□□ 1.59
AC008878.3-201ENST00000617428 ANP32AP39687 249 aaKnown RBP24.95■■□□□ 1.58
AC008878.3-201ENST00000617428 CFDP1Q9UEE9 299 aaPredicted RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 385 ms