RNA–Protein interactions for RNA: ENST00000261917.3

HCN4-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN4, Length 7,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4-201ENST00000261917 DCAF8L2P0C7V8 631 aa32.13■■■□□ 2.73
HCN4-201ENST00000261917 EHMT2Q96KQ7 1210 aa29.97■■■□□ 2.39
HCN4-201ENST00000261917 SUPT5HO00267 1087 aaKnown RBP29.89■■■□□ 2.37
HCN4-201ENST00000261917 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
HCN4-201ENST00000261917 TTBK1Q5TCY1 1321 aaPredicted RBP28.82■■■□□ 2.2
HCN4-201ENST00000261917 APLP2Q06481 763 aa28.58■■■□□ 2.17
HCN4-201ENST00000261917 RANGAP1P46060 587 aaPredicted RBP28.54■■■□□ 2.16
HCN4-201ENST00000261917 FAM9AQ8IZU1 332 aaPredicted RBP28.5■■■□□ 2.15
HCN4-201ENST00000261917 PELP1Q8IZL8 1130 aaKnown RBP28.33■■■□□ 2.12
HCN4-201ENST00000261917 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
HCN4-201ENST00000261917 ATP1B4Q9UN42 357 aaPredicted RBP28.25■■■□□ 2.11
HCN4-201ENST00000261917 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
HCN4-201ENST00000261917 ERICH6Q7L0X2 663 aa27.68■■■□□ 2.02
HCN4-201ENST00000261917 CCER1Q8TC90 406 aaPredicted RBP27.46■■□□□ 1.99
HCN4-201ENST00000261917 UBTFP17480 764 aaKnown RBP27.43■■□□□ 1.98
HCN4-201ENST00000261917 TRIM41Q8WV44 630 aa27.38■■□□□ 1.97
HCN4-201ENST00000261917 MYT1LQ9UL68 1186 aa27.37■■□□□ 1.97
HCN4-201ENST00000261917 PPARGC1BQ86YN6 1023 aaKnown RBP27.35■■□□□ 1.97
HCN4-201ENST00000261917 YTHDC1Q96MU7 727 aaKnown RBP27.31■■□□□ 1.96
HCN4-201ENST00000261917 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
HCN4-201ENST00000261917 POLR3GLQ9BT43 218 aa27.12■■□□□ 1.93
HCN4-201ENST00000261917 CENPBP07199 599 aaPredicted RBP27.09■■□□□ 1.93
HCN4-201ENST00000261917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.07■■□□□ 1.92
HCN4-201ENST00000261917 HNRNPUL2Q1KMD3 747 aaKnown RBP27.07■■□□□ 1.92
HCN4-201ENST00000261917 CNGB1Q14028 1251 aaPredicted RBP27.07■■□□□ 1.92
HCN4-201ENST00000261917 ITGAEP38570 1179 aa26.99■■□□□ 1.91
HCN4-201ENST00000261917 NEFLP07196 543 aa26.94■■□□□ 1.9
HCN4-201ENST00000261917 SLC4A1APQ9BWU0 796 aaKnown RBP26.81■■□□□ 1.88
HCN4-201ENST00000261917 MYT1Q01538 1121 aa26.73■■□□□ 1.87
HCN4-201ENST00000261917 ZEB1P37275 1124 aaPredicted RBP26.72■■□□□ 1.87
HCN4-201ENST00000261917 DAXXQ9UER7 740 aaPredicted RBP26.5■■□□□ 1.83
HCN4-201ENST00000261917 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
HCN4-201ENST00000261917 BCL11AQ9H165 835 aa26.07■■□□□ 1.76
HCN4-201ENST00000261917 CLSPNQ9HAW4 1339 aa26.06■■□□□ 1.76
HCN4-201ENST00000261917 SLC24A1O60721 1099 aa26.06■■□□□ 1.76
HCN4-201ENST00000261917 TRIM26Q12899 539 aaPredicted RBP26.05■■□□□ 1.76
HCN4-201ENST00000261917 FAM50AQ14320 339 aaKnown RBP26.05■■□□□ 1.76
HCN4-201ENST00000261917 TRIM52Q96A61 297 aa25.97■■□□□ 1.75
HCN4-201ENST00000261917 FBLN2P98095 1184 aa25.95■■□□□ 1.75
HCN4-201ENST00000261917 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
HCN4-201ENST00000261917 ZNF316A6NFI3 1004 aaPredicted RBP25.89■■□□□ 1.74
HCN4-201ENST00000261917 BCANQ96GW7 911 aa25.89■■□□□ 1.73
HCN4-201ENST00000261917 NEUROD1Q13562 356 aa25.88■■□□□ 1.73
HCN4-201ENST00000261917 ZNF326Q5BKZ1 582 aaKnown RBP25.87■■□□□ 1.73
HCN4-201ENST00000261917 HRCP23327 699 aa25.82■■□□□ 1.72
HCN4-201ENST00000261917 PLPPR3Q6T4P5 718 aa25.82■■□□□ 1.72
HCN4-201ENST00000261917 ARID3CA6NKF2 412 aa25.76■■□□□ 1.71
HCN4-201ENST00000261917 ABCC9O60706 1549 aa25.57■■□□□ 1.68
HCN4-201ENST00000261917 ZBTB47Q9UFB7 747 aaPredicted RBP25.52■■□□□ 1.68
HCN4-201ENST00000261917 RTL5Q5HYW3 569 aaPredicted RBP25.51■■□□□ 1.67
HCN4-201ENST00000261917 P3H3Q8IVL6 736 aa25.48■■□□□ 1.67
HCN4-201ENST00000261917 DIEXFQ68CQ4 756 aaKnown RBP25.45■■□□□ 1.66
HCN4-201ENST00000261917 CANXP27824 592 aaKnown RBP25.42■■□□□ 1.66
HCN4-201ENST00000261917 ZNF777Q9ULD5 760 aaPredicted RBP25.35■■□□□ 1.65
HCN4-201ENST00000261917 ANP32CO43423 234 aa25.22■■□□□ 1.63
HCN4-201ENST00000261917 CHGAP10645 457 aaKnown RBP25.21■■□□□ 1.63
HCN4-201ENST00000261917 NEFMP07197 916 aa25.2■■□□□ 1.63
HCN4-201ENST00000261917 ESF1Q9H501 851 aaKnown RBP25.19■■□□□ 1.62
HCN4-201ENST00000261917 STAG3Q9UJ98 1225 aa25.15■■□□□ 1.62
HCN4-201ENST00000261917 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
HCN4-201ENST00000261917 PLEKHG5O94827 1062 aa25.1■■□□□ 1.61
HCN4-201ENST00000261917 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
HCN4-201ENST00000261917 A0A0G2JS52 829 aa25.04■■□□□ 1.6
HCN4-201ENST00000261917 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
HCN4-201ENST00000261917 NPM2Q86SE8 214 aaKnown RBP25.01■■□□□ 1.59
HCN4-201ENST00000261917 SALL2Q9Y467 1007 aaPredicted RBP24.92■■□□□ 1.58
HCN4-201ENST00000261917 GTF3C3Q9Y5Q9 886 aa24.9■■□□□ 1.58
HCN4-201ENST00000261917 ZBTB7CA1YPR0 619 aa24.87■■□□□ 1.57
HCN4-201ENST00000261917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.86■■□□□ 1.57
HCN4-201ENST00000261917 NPM1P06748 294 aaKnown RBP eCLIP24.76■■□□□ 1.55
HCN4-201ENST00000261917 HSP90AA1P07900 732 aaKnown RBP24.7■■□□□ 1.54
HCN4-201ENST00000261917 CHIC2Q9UKJ5 165 aa24.67■■□□□ 1.54
HCN4-201ENST00000261917 C14orf37Q86TY3 774 aa24.64■■□□□ 1.53
HCN4-201ENST00000261917 FAM9BQ8IZU0 186 aa24.64■■□□□ 1.53
HCN4-201ENST00000261917 ANP32AP39687 249 aaKnown RBP24.61■■□□□ 1.53
HCN4-201ENST00000261917 KDM2AQ9Y2K7 1162 aa24.61■■□□□ 1.53
HCN4-201ENST00000261917 ARXQ96QS3 562 aa24.59■■□□□ 1.53
HCN4-201ENST00000261917 FKBP8Q14318 412 aa24.46■■□□□ 1.51
HCN4-201ENST00000261917 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
HCN4-201ENST00000261917 TONSLQ96HA7 1378 aa24.45■■□□□ 1.51
HCN4-201ENST00000261917 HNRNPUQ00839 825 aaKnown RBP eCLIP24.44■■□□□ 1.5
HCN4-201ENST00000261917 CSRNP3Q8WYN3 585 aa24.43■■□□□ 1.5
HCN4-201ENST00000261917 DDX10Q13206 875 aaKnown RBP24.43■■□□□ 1.5
HCN4-201ENST00000261917 ANP32BQ92688 251 aaKnown RBP24.41■■□□□ 1.5
HCN4-201ENST00000261917 TULP1O00294 542 aaPredicted RBP24.4■■□□□ 1.5
HCN4-201ENST00000261917 KCNH8Q96L42 1107 aa24.38■■□□□ 1.49
HCN4-201ENST00000261917 SENP3-EIF4A1A0A087X0R7 540 aa24.37■■□□□ 1.49
HCN4-201ENST00000261917 HIRIP3Q9BW71 556 aaPredicted RBP24.37■■□□□ 1.49
HCN4-201ENST00000261917 HAP1P54257 671 aaPredicted RBP24.37■■□□□ 1.49
HCN4-201ENST00000261917 UPF2Q9HAU5 1272 aaKnown RBP24.36■■□□□ 1.49
HCN4-201ENST00000261917 EIF5BO60841 1220 aaKnown RBP24.36■■□□□ 1.49
HCN4-201ENST00000261917 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
HCN4-201ENST00000261917 WDR43Q15061 677 aaKnown RBP eCLIP24.34■■□□□ 1.49
HCN4-201ENST00000261917 TMC1Q8TDI8 760 aa24.32■■□□□ 1.48
HCN4-201ENST00000261917 PPP1R15AO75807 674 aaPredicted RBP24.31■■□□□ 1.48
HCN4-201ENST00000261917 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
HCN4-201ENST00000261917 IRX6P78412 446 aaPredicted RBP24.28■■□□□ 1.48
HCN4-201ENST00000261917 NBR1Q14596 966 aa24.28■■□□□ 1.48
HCN4-201ENST00000261917 TPRNQ4KMQ1 711 aa24.25■■□□□ 1.47
HCN4-201ENST00000261917 TAOK2Q9UL54 1235 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms