RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 PELP1Q8IZL8 1130 aaKnown RBP29.65■■■□□ 2.34
ITGA6-201ENST00000264107 MYT1Q01538 1121 aa29.47■■■□□ 2.31
ITGA6-201ENST00000264107 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
ITGA6-201ENST00000264107 SUPT5HO00267 1087 aaKnown RBP28.56■■■□□ 2.16
ITGA6-201ENST00000264107 CENPBP07199 599 aaPredicted RBP28.44■■■□□ 2.14
ITGA6-201ENST00000264107 ERICH6Q7L0X2 663 aa28.33■■■□□ 2.13
ITGA6-201ENST00000264107 PCGF6Q9BYE7 350 aa28.33■■■□□ 2.13
ITGA6-201ENST00000264107 NISCHQ9Y2I1 1504 aa28.2■■■□□ 2.1
ITGA6-201ENST00000264107 CCER1Q8TC90 406 aaPredicted RBP27.96■■■□□ 2.07
ITGA6-201ENST00000264107 ZEB1P37275 1124 aaPredicted RBP27.94■■■□□ 2.06
ITGA6-201ENST00000264107 EHMT2Q96KQ7 1210 aa27.76■■■□□ 2.03
ITGA6-201ENST00000264107 HRCP23327 699 aa27.56■■■□□ 2
ITGA6-201ENST00000264107 YTHDC1Q96MU7 727 aaKnown RBP27.52■■■□□ 2
ITGA6-201ENST00000264107 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
ITGA6-201ENST00000264107 TTBK1Q5TCY1 1321 aaPredicted RBP27.34■■□□□ 1.97
ITGA6-201ENST00000264107 NEFLP07196 543 aa27.32■■□□□ 1.96
ITGA6-201ENST00000264107 APLP2Q06481 763 aa27.1■■□□□ 1.93
ITGA6-201ENST00000264107 PPARGC1BQ86YN6 1023 aaKnown RBP26.97■■□□□ 1.91
ITGA6-201ENST00000264107 FAM9AQ8IZU1 332 aaPredicted RBP26.97■■□□□ 1.91
ITGA6-201ENST00000264107 TRIM26Q12899 539 aaPredicted RBP26.79■■□□□ 1.88
ITGA6-201ENST00000264107 GTF3C3Q9Y5Q9 886 aa26.63■■□□□ 1.85
ITGA6-201ENST00000264107 RTL5Q5HYW3 569 aaPredicted RBP26.57■■□□□ 1.84
ITGA6-201ENST00000264107 DAXXQ9UER7 740 aaPredicted RBP26.5■■□□□ 1.83
ITGA6-201ENST00000264107 DIEXFQ68CQ4 756 aaKnown RBP26.38■■□□□ 1.81
ITGA6-201ENST00000264107 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
ITGA6-201ENST00000264107 ACIN1Q9UKV3 1341 aaKnown RBP26.22■■□□□ 1.79
ITGA6-201ENST00000264107 BCANQ96GW7 911 aa26.03■■□□□ 1.76
ITGA6-201ENST00000264107 RANGAP1P46060 587 aaPredicted RBP26.02■■□□□ 1.76
ITGA6-201ENST00000264107 ZNF316A6NFI3 1004 aaPredicted RBP25.96■■□□□ 1.75
ITGA6-201ENST00000264107 EIF5BO60841 1220 aaKnown RBP25.96■■□□□ 1.75
ITGA6-201ENST00000264107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
ITGA6-201ENST00000264107 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
ITGA6-201ENST00000264107 UBTFP17480 764 aaKnown RBP25.86■■□□□ 1.73
ITGA6-201ENST00000264107 CDK11AQ9UQ88 783 aaPredicted RBP25.82■■□□□ 1.72
ITGA6-201ENST00000264107 SCAF1Q9H7N4 1312 aaKnown RBP25.8■■□□□ 1.72
ITGA6-201ENST00000264107 GLIPR1L2Q4G1C9 344 aa25.74■■□□□ 1.71
ITGA6-201ENST00000264107 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
ITGA6-201ENST00000264107 MYT1LQ9UL68 1186 aa25.61■■□□□ 1.69
ITGA6-201ENST00000264107 HNRNPUL2Q1KMD3 747 aaKnown RBP25.59■■□□□ 1.69
ITGA6-201ENST00000264107 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
ITGA6-201ENST00000264107 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
ITGA6-201ENST00000264107 CLSPNQ9HAW4 1339 aa25.5■■□□□ 1.67
ITGA6-201ENST00000264107 POLR3GLQ9BT43 218 aa25.43■■□□□ 1.66
ITGA6-201ENST00000264107 ANP32AP39687 249 aaKnown RBP25.42■■□□□ 1.66
ITGA6-201ENST00000264107 BCL11AQ9H165 835 aa25.39■■□□□ 1.65
ITGA6-201ENST00000264107 CNGB1Q14028 1251 aaPredicted RBP25.38■■□□□ 1.65
ITGA6-201ENST00000264107 ANP32EQ9BTT0 268 aa25.36■■□□□ 1.65
ITGA6-201ENST00000264107 ITGAEP38570 1179 aa25.36■■□□□ 1.65
ITGA6-201ENST00000264107 FKBP8Q14318 412 aa25.22■■□□□ 1.63
ITGA6-201ENST00000264107 NBR1Q14596 966 aa25.22■■□□□ 1.63
ITGA6-201ENST00000264107 ANP32CO43423 234 aa25.16■■□□□ 1.62
ITGA6-201ENST00000264107 NPM2Q86SE8 214 aaKnown RBP25.14■■□□□ 1.61
ITGA6-201ENST00000264107 ZBTB47Q9UFB7 747 aaPredicted RBP24.94■■□□□ 1.58
ITGA6-201ENST00000264107 ANP32BQ92688 251 aaKnown RBP24.86■■□□□ 1.57
ITGA6-201ENST00000264107 RTN4Q9NQC3 1192 aaKnown RBP24.75■■□□□ 1.55
ITGA6-201ENST00000264107 ARXQ96QS3 562 aa24.65■■□□□ 1.54
ITGA6-201ENST00000264107 MIER1Q8N108 512 aa24.64■■□□□ 1.54
ITGA6-201ENST00000264107 HNRNPUQ00839 825 aaKnown RBP eCLIP24.56■■□□□ 1.52
ITGA6-201ENST00000264107 DCAF1Q9Y4B6 1507 aa24.55■■□□□ 1.52
ITGA6-201ENST00000264107 CCDC136Q96JN2 1154 aa24.52■■□□□ 1.52
ITGA6-201ENST00000264107 NEFMP07197 916 aa24.5■■□□□ 1.51
ITGA6-201ENST00000264107 TNNT2P45379 298 aaPredicted RBP24.5■■□□□ 1.51
ITGA6-201ENST00000264107 ERICH6BQ5W0A0 696 aa24.5■■□□□ 1.51
ITGA6-201ENST00000264107 DEKP35659 375 aaKnown RBP24.49■■□□□ 1.51
ITGA6-201ENST00000264107 FAM50AQ14320 339 aaKnown RBP24.49■■□□□ 1.51
ITGA6-201ENST00000264107 TRIM52Q96A61 297 aa24.48■■□□□ 1.51
ITGA6-201ENST00000264107 CANXP27824 592 aaKnown RBP24.48■■□□□ 1.51
ITGA6-201ENST00000264107 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
ITGA6-201ENST00000264107 IRX6P78412 446 aaPredicted RBP24.43■■□□□ 1.5
ITGA6-201ENST00000264107 NAP1L5Q96NT1 182 aaPredicted RBP24.42■■□□□ 1.5
ITGA6-201ENST00000264107 SLC4A1APQ9BWU0 796 aaKnown RBP24.42■■□□□ 1.5
ITGA6-201ENST00000264107 HSP90AA1P07900 732 aaKnown RBP24.41■■□□□ 1.5
ITGA6-201ENST00000264107 UPF2Q9HAU5 1272 aaKnown RBP24.4■■□□□ 1.5
ITGA6-201ENST00000264107 DDX10Q13206 875 aaKnown RBP24.36■■□□□ 1.49
ITGA6-201ENST00000264107 SUPT16HQ9Y5B9 1047 aaKnown RBP24.35■■□□□ 1.49
ITGA6-201ENST00000264107 TRIM44Q96DX7 344 aaPredicted RBP24.34■■□□□ 1.49
ITGA6-201ENST00000264107 NOP58Q9Y2X3 529 aaKnown RBP24.31■■□□□ 1.48
ITGA6-201ENST00000264107 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.31■■□□□ 1.48
ITGA6-201ENST00000264107 DDRGK1Q96HY6 314 aa24.28■■□□□ 1.48
ITGA6-201ENST00000264107 PPM1GO15355 546 aaPredicted RBP24.28■■□□□ 1.48
ITGA6-201ENST00000264107 FAM9BQ8IZU0 186 aa24.27■■□□□ 1.48
ITGA6-201ENST00000264107 ZNF326Q5BKZ1 582 aaKnown RBP24.22■■□□□ 1.47
ITGA6-201ENST00000264107 CDK11BP21127 795 aaKnown RBP24.2■■□□□ 1.47
ITGA6-201ENST00000264107 LAS1LQ9Y4W2 734 aaKnown RBP24.18■■□□□ 1.46
ITGA6-201ENST00000264107 RBM19Q9Y4C8 960 aaKnown RBP24.17■■□□□ 1.46
ITGA6-201ENST00000264107 ABCC9O60706 1549 aa24.08■■□□□ 1.45
ITGA6-201ENST00000264107 BECN1Q14457 450 aa24.04■■□□□ 1.44
ITGA6-201ENST00000264107 TSHZ2Q9NRE2 1034 aa24.02■■□□□ 1.44
ITGA6-201ENST00000264107 SALL2Q9Y467 1007 aaPredicted RBP23.98■■□□□ 1.43
ITGA6-201ENST00000264107 PABPN1Q86U42 306 aaKnown RBP eCLIP23.98■■□□□ 1.43
ITGA6-201ENST00000264107 NCLP19338 710 aaKnown RBP23.97■■□□□ 1.43
ITGA6-201ENST00000264107 AMER1Q5JTC6 1135 aaPredicted RBP23.97■■□□□ 1.43
ITGA6-201ENST00000264107 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.95■■□□□ 1.42
ITGA6-201ENST00000264107 MRS2Q9HD23 443 aa23.95■■□□□ 1.42
ITGA6-201ENST00000264107 PPP4R2Q9NY27 417 aa23.94■■□□□ 1.42
ITGA6-201ENST00000264107 DNTTIP2Q5QJE6 756 aaKnown RBP23.93■■□□□ 1.42
ITGA6-201ENST00000264107 TONSLQ96HA7 1378 aa23.9■■□□□ 1.42
ITGA6-201ENST00000264107 PRKCSHP14314 528 aaPredicted RBP23.9■■□□□ 1.42
ITGA6-201ENST00000264107 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
ITGA6-201ENST00000264107 PTMAP06454 111 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms