Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 SH3YL1-208ENST00000431160 721 ntTSL 210.33□□□□□ -0.764e-6■□□□□ 10.4
CSTF2P33240 UQCRC2-201ENST00000268379 2615 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.812e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-229ENST00000626873 1973 ntTSL 5 BASIC9.93□□□□□ -0.824e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-219ENST00000473104 2463 ntTSL 1 (best)9.51□□□□□ -0.894e-6■□□□□ 10.4
CSTF2P33240 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC9.05□□□□□ -0.962e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC8.88□□□□□ -0.994e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-222ENST00000479739 2236 ntTSL 28.66□□□□□ -1.024e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-215ENST00000468321 2739 ntTSL 1 (best)7.76□□□□□ -1.174e-6■□□□□ 10.4
CSTF2P33240 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.292e-6■□□□□ 10.4
CSTF2P33240 A1CF-209ENST00000473480 813 ntTSL 36.79□□□□□ -1.322e-6■□□□□ 10.4
CSTF2P33240 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.73□□□□□ -1.332e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.07□□□□□ -1.444e-6■□□□□ 10.4
CSTF2P33240 NF1-205ENST00000456735 7787 ntTSL 56.07□□□□□ -1.442e-6■□□□□ 10.4
CSTF2P33240 CHD9-217ENST00000565832 2169 ntTSL 1 (best)5.73□□□□□ -1.492e-6■□□□□ 10.4
CSTF2P33240 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.22□□□□□ -1.572e-6■□□□□ 10.4
CSTF2P33240 NF1-216ENST00000495910 8223 ntTSL 25.11□□□□□ -1.592e-6■□□□□ 10.4
CSTF2P33240 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.62e-6■□□□□ 10.4
CSTF2P33240 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.46□□□□□ -1.72e-6■□□□□ 10.4
CSTF2P33240 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.16□□□□□ -1.92e-6■□□□□ 10.4
CSTF2P33240 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.912e-6■□□□□ 10.4
CSTF2P33240 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.932e-6■□□□□ 10.4
CSTF2P33240 C5orf24-205ENST00000507390 269 ntTSL 22.27□□□□□ -2.052e-6■□□□□ 10.4
CSTF2P33240 AC020656.2-201ENST00000613291 5309 ntBASIC5.87□□□□□ -1.477e-7■□□□□ 10.3
CSTF2P33240 RPL13A-208ENST00000477613 796 ntTSL 517.19■□□□□ 0.341e-13■□□□□ 10.3
CSTF2P33240 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)14.52□□□□□ -0.091e-13■□□□□ 10.3
CSTF2P33240 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.11e-13■□□□□ 10.3
CSTF2P33240 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.49□□□□□ -0.251e-13■□□□□ 10.3
CSTF2P33240 RPL13A-212ENST00000488946 2312 ntTSL 213.27□□□□□ -0.291e-13■□□□□ 10.3
CSTF2P33240 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.114e-9■□□□□ 10.3
CSTF2P33240 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.274e-9■□□□□ 10.3
CSTF2P33240 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC9.88□□□□□ -0.834e-9■□□□□ 10.3
CSTF2P33240 FARP1-205ENST00000457029 602 ntTSL 58.12□□□□□ -1.114e-9■□□□□ 10.3
CSTF2P33240 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC7.35□□□□□ -1.234e-9■□□□□ 10.3
CSTF2P33240 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.12□□□□□ -1.274e-9■□□□□ 10.3
CSTF2P33240 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.444e-9■□□□□ 10.3
CSTF2P33240 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.88□□□□□ -1.634e-9■□□□□ 10.3
CSTF2P33240 TRAF3IP2-AS1-210ENST00000532353 576 ntTSL 211.88□□□□□ -0.515e-6■□□□□ 10.3
CSTF2P33240 TRAF3IP2-AS1-202ENST00000438298 1106 ntTSL 211.85□□□□□ -0.515e-6■□□□□ 10.3
CSTF2P33240 TRAF3IP2-AS1-207ENST00000456352 484 ntTSL 5 BASIC10.06□□□□□ -0.85e-6■□□□□ 10.3
CSTF2P33240 TRAF3IP2-AS1-205ENST00000442928 548 ntTSL 4 BASIC9.63□□□□□ -0.875e-6■□□□□ 10.3
CSTF2P33240 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC9.22□□□□□ -0.935e-6■□□□□ 10.3
CSTF2P33240 TRAF3IP2-AS1-204ENST00000440395 439 ntTSL 36.54□□□□□ -1.365e-6■□□□□ 10.3
CSTF2P33240 SLC16A3-216ENST00000583025 955 ntTSL 218.94■□□□□ 0.622e-6■□□□□ 10.3
CSTF2P33240 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.032e-6■□□□□ 10.3
CSTF2P33240 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.452e-6■□□□□ 10.3
CSTF2P33240 ACSL3-205ENST00000421680 639 ntTSL 32.67□□□□□ -1.982e-6■□□□□ 10.3
CSTF2P33240 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.629e-9■□□□□ 10.2
CSTF2P33240 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 04e-6■□□□□ 10.2
CSTF2P33240 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.814e-9■□□□□ 10.2
CSTF2P33240 KANK1-209ENST00000489369 7193 ntTSL 59.87□□□□□ -0.834e-9■□□□□ 10.2
CSTF2P33240 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.864e-9■□□□□ 10.2
CSTF2P33240 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.964e-9■□□□□ 10.2
CSTF2P33240 KANK1-201ENST00000354485 6912 ntTSL 28.12□□□□□ -1.114e-9■□□□□ 10.2
CSTF2P33240 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.023e-6■□□□□ 10.2
CSTF2P33240 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.053e-6■□□□□ 10.2
CSTF2P33240 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.443e-6■□□□□ 10.2
CSTF2P33240 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.07□□□□□ -0.483e-6■□□□□ 10.2
CSTF2P33240 KDM3A-205ENST00000441719 8741 ntTSL 210.49□□□□□ -0.733e-6■□□□□ 10.2
CSTF2P33240 TBC1D23-208ENST00000486274 4054 ntTSL 510.13□□□□□ -0.793e-6■□□□□ 10.2
CSTF2P33240 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.83e-6■□□□□ 10.2
CSTF2P33240 ITGA2-203ENST00000509814 3487 ntTSL 1 (best)9.66□□□□□ -0.863e-6■□□□□ 10.2
CSTF2P33240 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.923e-6■□□□□ 10.2
CSTF2P33240 ITGA2-206ENST00000513685 3501 ntTSL 1 (best)9.21□□□□□ -0.933e-6■□□□□ 10.2
CSTF2P33240 ITGA2-204ENST00000509960 3674 ntTSL 1 (best)8.95□□□□□ -0.983e-6■□□□□ 10.2
CSTF2P33240 ITGA2-202ENST00000503810 3782 ntTSL 58.87□□□□□ -0.993e-6■□□□□ 10.2
CSTF2P33240 ITGA2-205ENST00000510722 3530 ntTSL 1 (best)8.86□□□□□ -0.993e-6■□□□□ 10.2
CSTF2P33240 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.12□□□□□ -1.113e-6■□□□□ 10.2
CSTF2P33240 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.213e-6■□□□□ 10.2
CSTF2P33240 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.273e-6■□□□□ 10.2
CSTF2P33240 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.02□□□□□ -1.293e-6■□□□□ 10.2
CSTF2P33240 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.416e-9■□□□□ 10.2
CSTF2P33240 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.87□□□□□ -1.473e-6■□□□□ 10.2
CSTF2P33240 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.7□□□□□ -1.53e-6■□□□□ 10.2
CSTF2P33240 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.623e-6■□□□□ 10.2
CSTF2P33240 PLEKHA5-207ENST00000536974 3139 ntTSL 24.08□□□□□ -1.763e-6■□□□□ 10.2
CSTF2P33240 PLEKHA5-212ENST00000538677 557 ntTSL 53.74□□□□□ -1.813e-6■□□□□ 10.2
CSTF2P33240 KDM3A-207ENST00000462197 448 ntTSL 31.41□□□□□ -2.183e-6■□□□□ 10.2
CSTF2P33240 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.54■□□□□ 0.085e-6■□□□□ 10.1
CSTF2P33240 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.135e-6■□□□□ 10.1
CSTF2P33240 UBQLN1-206ENST00000533705 6055 ntTSL 1 (best)6.3□□□□□ -1.45e-6■□□□□ 10.1
CSTF2P33240 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.026e-6■□□□□ 10.1
CSTF2P33240 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.266e-6■□□□□ 10.1
CSTF2P33240 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.766e-6■□□□□ 10.1
CSTF2P33240 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.16□□□□□ -0.143e-6■□□□□ 10.1
CSTF2P33240 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.26□□□□□ -0.293e-6■□□□□ 10.1
CSTF2P33240 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.53e-6■□□□□ 10.1
CSTF2P33240 USP10-202ENST00000540269 3070 ntTSL 1 (best)11.6□□□□□ -0.553e-6■□□□□ 10.1
CSTF2P33240 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.623e-6■□□□□ 10.1
CSTF2P33240 SH2D4A-201ENST00000265807 3352 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.763e-6■□□□□ 10.1
CSTF2P33240 SH2D4A-202ENST00000518040 1697 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.823e-6■□□□□ 10.1
CSTF2P33240 SH2D4A-204ENST00000519207 1984 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.863e-6■□□□□ 10.1
CSTF2P33240 ZFYVE16-205ENST00000509562 684 ntTSL 38.8□□□□□ -13e-6■□□□□ 10.1
CSTF2P33240 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.05□□□□□ -1.123e-6■□□□□ 10.1
CSTF2P33240 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.11□□□□□ -1.273e-6■□□□□ 10.1
CSTF2P33240 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.523e-6■□□□□ 10.1
CSTF2P33240 ZFYVE16-211ENST00000512558 4496 ntTSL 25.05□□□□□ -1.63e-6■□□□□ 10.1
CSTF2P33240 ZFYVE16-207ENST00000510995 2873 ntTSL 1 (best)4.14□□□□□ -1.753e-6■□□□□ 10.1
CSTF2P33240 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.753e-6■□□□□ 10.1
CSTF2P33240 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.923e-6■□□□□ 10.1
CSTF2P33240 SH2D4A-203ENST00000518093 569 ntTSL 42.79□□□□□ -1.963e-6■□□□□ 10.1
Retrieved 100 of 6,735 protein–RNA pairs in 52.7 ms