RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-222ENST00000479739 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.89
SH3YL1-222ENST00000479739 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
SH3YL1-222ENST00000479739 ABCC9O60706 1549 aa17.89■□□□□ 0.46
SH3YL1-222ENST00000479739 RB1CC1Q8TDY2 1594 aa17.23■□□□□ 0.35
SH3YL1-222ENST00000479739 NACADO15069 1562 aa17.22■□□□□ 0.35
SH3YL1-222ENST00000479739 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
SH3YL1-222ENST00000479739 MYO15BQ96JP2 1530 aa17.15■□□□□ 0.34
SH3YL1-222ENST00000479739 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
SH3YL1-222ENST00000479739 DCAF1Q9Y4B6 1507 aa17.06■□□□□ 0.32
SH3YL1-222ENST00000479739 UNC13AQ9UPW8 1703 aa16.9■□□□□ 0.3
SH3YL1-222ENST00000479739 BICRAQ9NZM4 1560 aa16.76■□□□□ 0.27
SH3YL1-222ENST00000479739 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
SH3YL1-222ENST00000479739 SCRIBQ14160 1630 aa16.68■□□□□ 0.26
SH3YL1-222ENST00000479739 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
SH3YL1-222ENST00000479739 DNAJC5BQ9UF47 199 aa16.46■□□□□ 0.23
SH3YL1-222ENST00000479739 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
SH3YL1-222ENST00000479739 CC2D2AQ9P2K1 1620 aa16.22■□□□□ 0.19
SH3YL1-222ENST00000479739 CECR2Q9BXF3 1484 aa16.09■□□□□ 0.17
SH3YL1-222ENST00000479739 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
SH3YL1-222ENST00000479739 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
SH3YL1-222ENST00000479739 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
SH3YL1-222ENST00000479739 ATAD2BQ9ULI0 1458 aa15.89■□□□□ 0.13
SH3YL1-222ENST00000479739 SMARCA2P51531 1590 aa15.86■□□□□ 0.13
SH3YL1-222ENST00000479739 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
SH3YL1-222ENST00000479739 PEG3Q9GZU2 1588 aa15.86■□□□□ 0.13
SH3YL1-222ENST00000479739 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
SH3YL1-222ENST00000479739 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
SH3YL1-222ENST00000479739 WIZO95785 1651 aa15.69■□□□□ 0.1
SH3YL1-222ENST00000479739 RSF1Q96T23 1441 aaPredicted RBP15.66■□□□□ 0.1
SH3YL1-222ENST00000479739 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
SH3YL1-222ENST00000479739 NESP48681 1621 aa15.5■□□□□ 0.07
SH3YL1-222ENST00000479739 LAMC3Q9Y6N6 1575 aa15.48■□□□□ 0.07
SH3YL1-222ENST00000479739 ERCC6Q03468 1493 aa15.4■□□□□ 0.06
SH3YL1-222ENST00000479739 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
SH3YL1-222ENST00000479739 KIF21AQ7Z4S6 1674 aa15.34■□□□□ 0.05
SH3YL1-222ENST00000479739 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
SH3YL1-222ENST00000479739 CFTRP13569 1480 aa15.33■□□□□ 0.04
SH3YL1-222ENST00000479739 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
SH3YL1-222ENST00000479739 THOC2Q8NI27 1593 aaKnown RBP15.31■□□□□ 0.04
SH3YL1-222ENST00000479739 CUX2O14529 1486 aa15.3■□□□□ 0.04
SH3YL1-222ENST00000479739 PRDM2Q13029 1718 aa15.24■□□□□ 0.03
SH3YL1-222ENST00000479739 FANCD2Q9BXW9 1451 aa15.23■□□□□ 0.03
SH3YL1-222ENST00000479739 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.02
SH3YL1-222ENST00000479739 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
SH3YL1-222ENST00000479739 WDR62O43379 1518 aa15.18■□□□□ 0.02
SH3YL1-222ENST00000479739 SUPT5HO00267 1087 aaKnown RBP15.17■□□□□ 0.02
SH3YL1-222ENST00000479739 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
SH3YL1-222ENST00000479739 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
SH3YL1-222ENST00000479739 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
SH3YL1-222ENST00000479739 DNMBPQ6XZF7 1577 aa14.98□□□□□ -0.01
SH3YL1-222ENST00000479739 HRCP23327 699 aa14.96□□□□□ -0.02
SH3YL1-222ENST00000479739 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.02
SH3YL1-222ENST00000479739 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
SH3YL1-222ENST00000479739 CUX1P39880 1505 aa14.88□□□□□ -0.03
SH3YL1-222ENST00000479739 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
SH3YL1-222ENST00000479739 TARBP1Q13395 1621 aaKnown RBP14.86□□□□□ -0.03
SH3YL1-222ENST00000479739 ZNF608Q9ULD9 1512 aaPredicted RBP14.84□□□□□ -0.03
SH3YL1-222ENST00000479739 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.04
SH3YL1-222ENST00000479739 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
SH3YL1-222ENST00000479739 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
SH3YL1-222ENST00000479739 RAD54L2Q9Y4B4 1467 aa14.78□□□□□ -0.04
SH3YL1-222ENST00000479739 SOGA1O94964 1423 aa14.77□□□□□ -0.04
SH3YL1-222ENST00000479739 BIVM-ERCC5R4GMW8 1640 aa14.76□□□□□ -0.05
SH3YL1-222ENST00000479739 TOP2BQ02880 1626 aa14.75□□□□□ -0.05
SH3YL1-222ENST00000479739 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
SH3YL1-222ENST00000479739 WRNQ14191 1432 aaPredicted RBP eCLIP14.75□□□□□ -0.05
SH3YL1-222ENST00000479739 SYNJ1O43426 1573 aa14.74□□□□□ -0.05
SH3YL1-222ENST00000479739 AQRO60306 1485 aaKnown RBP eCLIP14.73□□□□□ -0.05
SH3YL1-222ENST00000479739 ABCA10Q8WWZ4 1543 aa14.69□□□□□ -0.06
SH3YL1-222ENST00000479739 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
SH3YL1-222ENST00000479739 PCGF6Q9BYE7 350 aa14.68□□□□□ -0.06
SH3YL1-222ENST00000479739 ABCA5Q8WWZ7 1642 aa14.65□□□□□ -0.06
SH3YL1-222ENST00000479739 GRIN2BQ13224 1484 aa14.62□□□□□ -0.07
SH3YL1-222ENST00000479739 GAPVD1Q14C86 1478 aa14.62□□□□□ -0.07
SH3YL1-222ENST00000479739 PBRM1Q86U86 1689 aa14.62□□□□□ -0.07
SH3YL1-222ENST00000479739 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
SH3YL1-222ENST00000479739 CHD1O14646 1710 aa14.61□□□□□ -0.07
SH3YL1-222ENST00000479739 SNAPC4Q5SXM2 1469 aa14.6□□□□□ -0.07
SH3YL1-222ENST00000479739 MAGI1Q96QZ7 1491 aaPredicted RBP14.6□□□□□ -0.07
SH3YL1-222ENST00000479739 PELP1Q8IZL8 1130 aaKnown RBP14.59□□□□□ -0.07
SH3YL1-222ENST00000479739 SYNJ2O15056 1496 aa14.53□□□□□ -0.08
SH3YL1-222ENST00000479739 ERICH3Q5RHP9 1530 aa14.51□□□□□ -0.09
SH3YL1-222ENST00000479739 ADAMTS12P58397 1594 aa14.5□□□□□ -0.09
SH3YL1-222ENST00000479739 FBLN2P98095 1184 aa14.49□□□□□ -0.09
SH3YL1-222ENST00000479739 TRIM26Q12899 539 aaPredicted RBP14.49□□□□□ -0.09
SH3YL1-222ENST00000479739 CHMP7Q8WUX9 453 aaPredicted RBP14.47□□□□□ -0.09
SH3YL1-222ENST00000479739 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.09
SH3YL1-222ENST00000479739 FHAD1B1AJZ9 1412 aa14.45□□□□□ -0.1
SH3YL1-222ENST00000479739 GRIN2AQ12879 1464 aa14.44□□□□□ -0.1
SH3YL1-222ENST00000479739 KIF27Q86VH2 1401 aa14.43□□□□□ -0.1
SH3YL1-222ENST00000479739 RIMBP3CA6NJZ7 1639 aa14.43□□□□□ -0.1
SH3YL1-222ENST00000479739 RIMBP3BA6NNM3 1639 aa14.43□□□□□ -0.1
SH3YL1-222ENST00000479739 RIMBP3Q9UFD9 1639 aa14.43□□□□□ -0.1
SH3YL1-222ENST00000479739 ARHGEF11O15085 1522 aa14.43□□□□□ -0.1
SH3YL1-222ENST00000479739 LOC105371045A0A1W2PR82 267 aa14.41□□□□□ -0.1
SH3YL1-222ENST00000479739 PPARGC1BQ86YN6 1023 aaKnown RBP14.4□□□□□ -0.1
SH3YL1-222ENST00000479739 ZEB1P37275 1124 aaPredicted RBP14.39□□□□□ -0.11
SH3YL1-222ENST00000479739 IGF1RP08069 1367 aa14.39□□□□□ -0.11
SH3YL1-222ENST00000479739 NUP160Q12769 1436 aa14.39□□□□□ -0.11
SH3YL1-222ENST00000479739 CEP170Q5SW79 1584 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms