RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
USP10-202ENST00000540269 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
USP10-202ENST00000540269 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
USP10-202ENST00000540269 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.17
USP10-202ENST00000540269 DCAF8L2P0C7V8 631 aa21.95■■□□□ 1.1
USP10-202ENST00000540269 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
USP10-202ENST00000540269 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
USP10-202ENST00000540269 CHIC1Q5VXU3 224 aa21.15■□□□□ 0.98
USP10-202ENST00000540269 SCRIBQ14160 1630 aa21.14■□□□□ 0.98
USP10-202ENST00000540269 ABCC9O60706 1549 aa21.12■□□□□ 0.97
USP10-202ENST00000540269 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
USP10-202ENST00000540269 NACADO15069 1562 aa20.88■□□□□ 0.93
USP10-202ENST00000540269 RSF1Q96T23 1441 aaPredicted RBP20.86■□□□□ 0.93
USP10-202ENST00000540269 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.9
USP10-202ENST00000540269 RB1CC1Q8TDY2 1594 aa20.62■□□□□ 0.89
USP10-202ENST00000540269 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.89
USP10-202ENST00000540269 LOC105371045A0A1W2PR82 267 aa20.55■□□□□ 0.88
USP10-202ENST00000540269 WIZO95785 1651 aa20.45■□□□□ 0.86
USP10-202ENST00000540269 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
USP10-202ENST00000540269 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
USP10-202ENST00000540269 BAZ1AQ9NRL2 1556 aaPredicted RBP20.28■□□□□ 0.84
USP10-202ENST00000540269 PCGF6Q9BYE7 350 aa20.23■□□□□ 0.83
USP10-202ENST00000540269 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
USP10-202ENST00000540269 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
USP10-202ENST00000540269 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
USP10-202ENST00000540269 BICRAQ9NZM4 1560 aa20.14■□□□□ 0.81
USP10-202ENST00000540269 EIF4G1Q04637 1599 aaKnown RBP20.11■□□□□ 0.81
USP10-202ENST00000540269 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
USP10-202ENST00000540269 HRCP23327 699 aa20.07■□□□□ 0.8
USP10-202ENST00000540269 EHMT2Q96KQ7 1210 aa20.05■□□□□ 0.8
USP10-202ENST00000540269 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
USP10-202ENST00000540269 SMARCA2P51531 1590 aa20.01■□□□□ 0.79
USP10-202ENST00000540269 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
USP10-202ENST00000540269 TRIM26Q12899 539 aaPredicted RBP19.86■□□□□ 0.77
USP10-202ENST00000540269 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
USP10-202ENST00000540269 PPARGC1BQ86YN6 1023 aaKnown RBP19.79■□□□□ 0.76
USP10-202ENST00000540269 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
USP10-202ENST00000540269 SOGA1O94964 1423 aa19.7■□□□□ 0.74
USP10-202ENST00000540269 RUSC2Q8N2Y8 1516 aa19.65■□□□□ 0.74
USP10-202ENST00000540269 BAZ1BQ9UIG0 1483 aaKnown RBP19.62■□□□□ 0.73
USP10-202ENST00000540269 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
USP10-202ENST00000540269 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
USP10-202ENST00000540269 CSRNP3Q8WYN3 585 aa19.5■□□□□ 0.71
USP10-202ENST00000540269 CEP162Q5TB80 1403 aa19.45■□□□□ 0.7
USP10-202ENST00000540269 EEA1Q15075 1411 aa19.44■□□□□ 0.7
USP10-202ENST00000540269 TNIKQ9UKE5 1360 aa19.42■□□□□ 0.7
USP10-202ENST00000540269 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
USP10-202ENST00000540269 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
USP10-202ENST00000540269 TTBK1Q5TCY1 1321 aaPredicted RBP19.34■□□□□ 0.69
USP10-202ENST00000540269 GOLGA3Q08378 1498 aa19.34■□□□□ 0.69
USP10-202ENST00000540269 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
USP10-202ENST00000540269 TOP2BQ02880 1626 aa19.26■□□□□ 0.67
USP10-202ENST00000540269 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
USP10-202ENST00000540269 KIF21BO75037 1637 aa19.24■□□□□ 0.67
USP10-202ENST00000540269 ZEB1P37275 1124 aaPredicted RBP19.23■□□□□ 0.67
USP10-202ENST00000540269 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
USP10-202ENST00000540269 BIVM-ERCC5R4GMW8 1640 aa19.2■□□□□ 0.66
USP10-202ENST00000540269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.18■□□□□ 0.66
USP10-202ENST00000540269 CUX1P39880 1505 aa19.17■□□□□ 0.66
USP10-202ENST00000540269 CFTRP13569 1480 aa19.15■□□□□ 0.66
USP10-202ENST00000540269 CLIP1P30622 1438 aa19.12■□□□□ 0.65
USP10-202ENST00000540269 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
USP10-202ENST00000540269 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
USP10-202ENST00000540269 PRXQ9BXM0 1461 aa19.04■□□□□ 0.64
USP10-202ENST00000540269 VPS8Q8N3P4 1428 aa19.01■□□□□ 0.63
USP10-202ENST00000540269 CC2D2AQ9P2K1 1620 aa19.01■□□□□ 0.63
USP10-202ENST00000540269 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
USP10-202ENST00000540269 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
USP10-202ENST00000540269 KIF27Q86VH2 1401 aa18.95■□□□□ 0.62
USP10-202ENST00000540269 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
USP10-202ENST00000540269 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
USP10-202ENST00000540269 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
USP10-202ENST00000540269 CUX2O14529 1486 aa18.85■□□□□ 0.61
USP10-202ENST00000540269 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
USP10-202ENST00000540269 IGF1RP08069 1367 aa18.82■□□□□ 0.6
USP10-202ENST00000540269 APLP2Q06481 763 aa18.81■□□□□ 0.6
USP10-202ENST00000540269 NESP48681 1621 aa18.8■□□□□ 0.6
USP10-202ENST00000540269 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
USP10-202ENST00000540269 KANK4Q5T7N3 995 aaPredicted RBP18.78■□□□□ 0.6
USP10-202ENST00000540269 ARHGAP35Q9NRY4 1499 aa18.76■□□□□ 0.59
USP10-202ENST00000540269 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
USP10-202ENST00000540269 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
USP10-202ENST00000540269 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
USP10-202ENST00000540269 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
USP10-202ENST00000540269 DNMBPQ6XZF7 1577 aa18.66■□□□□ 0.58
USP10-202ENST00000540269 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
USP10-202ENST00000540269 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
USP10-202ENST00000540269 URB2Q14146 1524 aaKnown RBP18.58■□□□□ 0.56
USP10-202ENST00000540269 P3H3Q8IVL6 736 aa18.55■□□□□ 0.56
USP10-202ENST00000540269 RRBP1Q9P2E9 1410 aaKnown RBP18.55■□□□□ 0.56
USP10-202ENST00000540269 DIEXFQ68CQ4 756 aaKnown RBP18.54■□□□□ 0.56
USP10-202ENST00000540269 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
USP10-202ENST00000540269 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
USP10-202ENST00000540269 TIAM1Q13009 1591 aa18.48■□□□□ 0.55
USP10-202ENST00000540269 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
USP10-202ENST00000540269 DHX57Q6P158 1386 aaKnown RBP18.47■□□□□ 0.55
USP10-202ENST00000540269 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
USP10-202ENST00000540269 CCNB3Q8WWL7 1395 aa18.47■□□□□ 0.55
USP10-202ENST00000540269 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
USP10-202ENST00000540269 FHOD3Q2V2M9 1422 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms