RNA–Protein interactions for RNA: ENST00000477613.6

RPL13A-208, Transcript of ribosomal protein L13a, humanhuman

TSL 5

Gene RPL13A, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-208ENST00000477613 NISCHQ9Y2I1 1504 aa43.06■■■■■ 4.48
RPL13A-208ENST00000477613 CCDC180Q9P1Z9 1646 aa38.44■■■■□ 3.74
RPL13A-208ENST00000477613 ABCC9O60706 1549 aa37.77■■■■□ 3.64
RPL13A-208ENST00000477613 RB1CC1Q8TDY2 1594 aa36.27■■■■□ 3.4
RPL13A-208ENST00000477613 NACADO15069 1562 aa36.18■■■■□ 3.38
RPL13A-208ENST00000477613 DCAF8L2P0C7V8 631 aa35.98■■■■□ 3.35
RPL13A-208ENST00000477613 MYO15BQ96JP2 1530 aa35.9■■■■□ 3.34
RPL13A-208ENST00000477613 ZCCHC6Q5VYS8 1495 aaKnown RBP35.84■■■■□ 3.33
RPL13A-208ENST00000477613 DCAF1Q9Y4B6 1507 aa35.65■■■■□ 3.3
RPL13A-208ENST00000477613 UNC13AQ9UPW8 1703 aa35.43■■■■□ 3.26
RPL13A-208ENST00000477613 PABPN1Q86U42 306 aaKnown RBP eCLIP35.21■■■■□ 3.234e-6■□□□□ 9.3
RPL13A-208ENST00000477613 BICRAQ9NZM4 1560 aa35.17■■■■□ 3.22
RPL13A-208ENST00000477613 SCRIBQ14160 1630 aa35■■■■□ 3.19
RPL13A-208ENST00000477613 SHROOM4Q9ULL8 1493 aa34.84■■■■□ 3.17
RPL13A-208ENST00000477613 DNAJC5BQ9UF47 199 aa34.83■■■■□ 3.17
RPL13A-208ENST00000477613 EIF4G1Q04637 1599 aaKnown RBP34.27■■■■□ 3.08
RPL13A-208ENST00000477613 CC2D2AQ9P2K1 1620 aa34.18■■■■□ 3.06
RPL13A-208ENST00000477613 CECR2Q9BXF3 1484 aa33.99■■■■□ 3.03
RPL13A-208ENST00000477613 SMARCA4P51532 1647 aa33.48■■■□□ 2.95
RPL13A-208ENST00000477613 BAZ1AQ9NRL2 1556 aaPredicted RBP33.41■■■□□ 2.94
RPL13A-208ENST00000477613 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
RPL13A-208ENST00000477613 ATAD2BQ9ULI0 1458 aa33.34■■■□□ 2.93
RPL13A-208ENST00000477613 SMARCA2P51531 1590 aa33.32■■■□□ 2.92
RPL13A-208ENST00000477613 HMGXB3Q12766 1538 aa33.22■■■□□ 2.91
RPL13A-208ENST00000477613 PEG3Q9GZU2 1588 aa33.17■■■□□ 2.9
RPL13A-208ENST00000477613 MROH2BQ7Z745 1585 aa33.16■■■□□ 2.9
RPL13A-208ENST00000477613 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
RPL13A-208ENST00000477613 WIZO95785 1651 aa32.79■■■□□ 2.84
RPL13A-208ENST00000477613 RSF1Q96T23 1441 aaPredicted RBP32.69■■■□□ 2.82
RPL13A-208ENST00000477613 NESP48681 1621 aa32.61■■■□□ 2.81
RPL13A-208ENST00000477613 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
RPL13A-208ENST00000477613 LAMC3Q9Y6N6 1575 aa32.54■■■□□ 2.8
RPL13A-208ENST00000477613 TOP2AP11388 1531 aaKnown RBP32.46■■■□□ 2.79
RPL13A-208ENST00000477613 CUX2O14529 1486 aa32.37■■■□□ 2.77
RPL13A-208ENST00000477613 CADPSQ9ULU8 1353 aa32.36■■■□□ 2.77
RPL13A-208ENST00000477613 PDS5BQ9NTI5 1447 aa32.32■■■□□ 2.76
RPL13A-208ENST00000477613 KIF21AQ7Z4S6 1674 aa32.25■■■□□ 2.75
RPL13A-208ENST00000477613 THOC2Q8NI27 1593 aaKnown RBP32.22■■■□□ 2.75
RPL13A-208ENST00000477613 CFTRP13569 1480 aa32.14■■■□□ 2.74
RPL13A-208ENST00000477613 CCDC88BA6NC98 1476 aa32.04■■■□□ 2.72
RPL13A-208ENST00000477613 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
RPL13A-208ENST00000477613 MRC2Q9UBG0 1479 aa32.01■■■□□ 2.71
RPL13A-208ENST00000477613 CEP164Q9UPV0 1460 aa32.01■■■□□ 2.71
RPL13A-208ENST00000477613 WDR62O43379 1518 aa31.92■■■□□ 2.7
RPL13A-208ENST00000477613 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
RPL13A-208ENST00000477613 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.66
RPL13A-208ENST00000477613 SUPT5HO00267 1087 aaKnown RBP31.62■■■□□ 2.65
RPL13A-208ENST00000477613 DNAJC5Q9H3Z4 198 aa31.6■■■□□ 2.65
RPL13A-208ENST00000477613 TOPBP1Q92547 1522 aa31.47■■■□□ 2.63
RPL13A-208ENST00000477613 ABCC8Q09428 1581 aa31.47■■■□□ 2.63
RPL13A-208ENST00000477613 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
RPL13A-208ENST00000477613 IFT140Q96RY7 1462 aa31.34■■■□□ 2.61
RPL13A-208ENST00000477613 POLA1P09884 1462 aaPredicted RBP31.19■■■□□ 2.58
RPL13A-208ENST00000477613 ZNF608Q9ULD9 1512 aaPredicted RBP31.19■■■□□ 2.58
RPL13A-208ENST00000477613 TARBP1Q13395 1621 aaKnown RBP31.15■■■□□ 2.58
RPL13A-208ENST00000477613 CUX1P39880 1505 aa31.14■■■□□ 2.57
RPL13A-208ENST00000477613 EIF4G3O43432 1585 aaKnown RBP31.09■■■□□ 2.57
RPL13A-208ENST00000477613 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
RPL13A-208ENST00000477613 SOGA1O94964 1423 aa31.03■■■□□ 2.56
RPL13A-208ENST00000477613 RAD54L2Q9Y4B4 1467 aa31.02■■■□□ 2.56
RPL13A-208ENST00000477613 AQRO60306 1485 aaKnown RBP eCLIP30.97■■■□□ 2.555e-18■■■■■ 39.2
RPL13A-208ENST00000477613 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
RPL13A-208ENST00000477613 OSCARQ8IYS5 282 aa30.93■■■□□ 2.54
RPL13A-208ENST00000477613 TDRD9Q8NDG6 1382 aaKnown RBP30.87■■■□□ 2.53
RPL13A-208ENST00000477613 WRNQ14191 1432 aaPredicted RBP eCLIP30.84■■■□□ 2.53
RPL13A-208ENST00000477613 BIVM-ERCC5R4GMW8 1640 aa30.83■■■□□ 2.53
RPL13A-208ENST00000477613 TOP2BQ02880 1626 aa30.82■■■□□ 2.52
RPL13A-208ENST00000477613 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
RPL13A-208ENST00000477613 ABCA10Q8WWZ4 1543 aa30.78■■■□□ 2.52
RPL13A-208ENST00000477613 CHD1O14646 1710 aa30.74■■■□□ 2.51
RPL13A-208ENST00000477613 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
RPL13A-208ENST00000477613 SNAPC4Q5SXM2 1469 aa30.71■■■□□ 2.51
RPL13A-208ENST00000477613 GAPVD1Q14C86 1478 aa30.69■■■□□ 2.5
RPL13A-208ENST00000477613 MAGI1Q96QZ7 1491 aaPredicted RBP30.69■■■□□ 2.5
RPL13A-208ENST00000477613 ABCA5Q8WWZ7 1642 aa30.69■■■□□ 2.5
RPL13A-208ENST00000477613 PBRM1Q86U86 1689 aa30.66■■■□□ 2.5
RPL13A-208ENST00000477613 FBLN2P98095 1184 aa30.62■■■□□ 2.49
RPL13A-208ENST00000477613 SYNJ2O15056 1496 aa30.56■■■□□ 2.48
RPL13A-208ENST00000477613 CHMP7Q8WUX9 453 aaPredicted RBP30.52■■■□□ 2.48
RPL13A-208ENST00000477613 RIMBP3CA6NJZ7 1639 aa30.49■■■□□ 2.47
RPL13A-208ENST00000477613 RIMBP3BA6NNM3 1639 aa30.49■■■□□ 2.47
RPL13A-208ENST00000477613 RIMBP3Q9UFD9 1639 aa30.49■■■□□ 2.47
RPL13A-208ENST00000477613 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
RPL13A-208ENST00000477613 TRIM41Q8WV44 630 aa30.44■■■□□ 2.46
RPL13A-208ENST00000477613 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
RPL13A-208ENST00000477613 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
RPL13A-208ENST00000477613 ERICH3Q5RHP9 1530 aa30.41■■■□□ 2.46
RPL13A-208ENST00000477613 GRIN2AQ12879 1464 aa30.33■■■□□ 2.45
RPL13A-208ENST00000477613 FHAD1B1AJZ9 1412 aa30.33■■■□□ 2.45
RPL13A-208ENST00000477613 KIF27Q86VH2 1401 aa30.22■■■□□ 2.43
RPL13A-208ENST00000477613 NUP160Q12769 1436 aa30.22■■■□□ 2.43
RPL13A-208ENST00000477613 ARAP1Q96P48 1450 aa30.2■■■□□ 2.43
RPL13A-208ENST00000477613 CEP170Q5SW79 1584 aa30.19■■■□□ 2.42
RPL13A-208ENST00000477613 CYB5RLQ6IPT4 315 aa30.14■■■□□ 2.42
RPL13A-208ENST00000477613 IGF1RP08069 1367 aa30.1■■■□□ 2.41
RPL13A-208ENST00000477613 CUL7Q14999 1698 aa30.1■■■□□ 2.41
RPL13A-208ENST00000477613 SHROOM2Q13796 1616 aa30.02■■■□□ 2.4
RPL13A-208ENST00000477613 RUSC2Q8N2Y8 1516 aa29.97■■■□□ 2.39
RPL13A-208ENST00000477613 ERCC6L2Q5T890 1561 aa29.94■■■□□ 2.38
RPL13A-208ENST00000477613 CARMIL1Q5VZK9 1371 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms