RNA–Protein interactions for RNA: ENST00000505560.4

ZFYVE16-202, Transcript of zinc finger FYVE-type containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFYVE16, Length 6,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-202ENST00000505560 NISCHQ9Y2I1 1504 aa8.25□□□□□ -1.09
ZFYVE16-202ENST00000505560 CCDC180Q9P1Z9 1646 aa7.01□□□□□ -1.29
ZFYVE16-202ENST00000505560 ZCCHC6Q5VYS8 1495 aaKnown RBP6.92□□□□□ -1.3
ZFYVE16-202ENST00000505560 ABCC9O60706 1549 aa6.82□□□□□ -1.32
ZFYVE16-202ENST00000505560 DCAF1Q9Y4B6 1507 aa6.81□□□□□ -1.32
ZFYVE16-202ENST00000505560 MYO15BQ96JP2 1530 aa6.77□□□□□ -1.33
ZFYVE16-202ENST00000505560 BICRAQ9NZM4 1560 aa6.61□□□□□ -1.35
ZFYVE16-202ENST00000505560 NACADO15069 1562 aa6.59□□□□□ -1.36
ZFYVE16-202ENST00000505560 DCAF8L2P0C7V8 631 aa6.58□□□□□ -1.36
ZFYVE16-202ENST00000505560 SHROOM4Q9ULL8 1493 aa6.57□□□□□ -1.36
ZFYVE16-202ENST00000505560 CECR2Q9BXF3 1484 aa6.55□□□□□ -1.36
ZFYVE16-202ENST00000505560 DNAJC5BQ9UF47 199 aa6.5□□□□□ -1.37
ZFYVE16-202ENST00000505560 UNC13AQ9UPW8 1703 aa6.48□□□□□ -1.37
ZFYVE16-202ENST00000505560 RB1CC1Q8TDY2 1594 aa6.47□□□□□ -1.37
ZFYVE16-202ENST00000505560 SCRIBQ14160 1630 aa6.46□□□□□ -1.38
ZFYVE16-202ENST00000505560 PABPN1Q86U42 306 aaKnown RBP eCLIP6.45□□□□□ -1.38
ZFYVE16-202ENST00000505560 RSF1Q96T23 1441 aaPredicted RBP6.45□□□□□ -1.38
ZFYVE16-202ENST00000505560 MROH2BQ7Z745 1585 aa6.43□□□□□ -1.38
ZFYVE16-202ENST00000505560 PEG3Q9GZU2 1588 aa6.31□□□□□ -1.4
ZFYVE16-202ENST00000505560 ATAD2BQ9ULI0 1458 aa6.28□□□□□ -1.4
ZFYVE16-202ENST00000505560 EIF4G1Q04637 1599 aaKnown RBP6.27□□□□□ -1.41
ZFYVE16-202ENST00000505560 BAZ1AQ9NRL2 1556 aaPredicted RBP6.26□□□□□ -1.41
ZFYVE16-202ENST00000505560 WIZO95785 1651 aa6.26□□□□□ -1.41
ZFYVE16-202ENST00000505560 SUPT5HO00267 1087 aaKnown RBP6.26□□□□□ -1.41
ZFYVE16-202ENST00000505560 SMARCA4P51532 1647 aa6.26□□□□□ -1.41
ZFYVE16-202ENST00000505560 NCAPD3P42695 1498 aa6.25□□□□□ -1.41
ZFYVE16-202ENST00000505560 CCDC88BA6NC98 1476 aa6.17□□□□□ -1.42
ZFYVE16-202ENST00000505560 SMARCA2P51531 1590 aa6.16□□□□□ -1.42
ZFYVE16-202ENST00000505560 CHIC1Q5VXU3 224 aa6.14□□□□□ -1.43
ZFYVE16-202ENST00000505560 CC2D2AQ9P2K1 1620 aa6.13□□□□□ -1.43
ZFYVE16-202ENST00000505560 HMGXB3Q12766 1538 aa6.12□□□□□ -1.43
ZFYVE16-202ENST00000505560 TOP2AP11388 1531 aaKnown RBP6.12□□□□□ -1.43
ZFYVE16-202ENST00000505560 CFTRP13569 1480 aa6.09□□□□□ -1.43
ZFYVE16-202ENST00000505560 NESP48681 1621 aa6.08□□□□□ -1.44
ZFYVE16-202ENST00000505560 BAZ1BQ9UIG0 1483 aaKnown RBP6.06□□□□□ -1.44
ZFYVE16-202ENST00000505560 CADPSQ9ULU8 1353 aa6.04□□□□□ -1.44
ZFYVE16-202ENST00000505560 RUSC2Q8N2Y8 1516 aa6.01□□□□□ -1.45
ZFYVE16-202ENST00000505560 ABCC8Q09428 1581 aa6□□□□□ -1.45
ZFYVE16-202ENST00000505560 SYNJ1O43426 1573 aa5.97□□□□□ -1.45
ZFYVE16-202ENST00000505560 CUX2O14529 1486 aa5.96□□□□□ -1.45
ZFYVE16-202ENST00000505560 SOGA1O94964 1423 aa5.96□□□□□ -1.46
ZFYVE16-202ENST00000505560 CUX1P39880 1505 aa5.95□□□□□ -1.46
ZFYVE16-202ENST00000505560 URB2Q14146 1524 aaKnown RBP5.94□□□□□ -1.46
ZFYVE16-202ENST00000505560 WRNQ14191 1432 aaPredicted RBP eCLIP5.92□□□□□ -1.46
ZFYVE16-202ENST00000505560 LOC105371045A0A1W2PR82 267 aa5.9□□□□□ -1.47
ZFYVE16-202ENST00000505560 FANCD2Q9BXW9 1451 aa5.89□□□□□ -1.47
ZFYVE16-202ENST00000505560 POLA1P09884 1462 aaPredicted RBP5.89□□□□□ -1.47
ZFYVE16-202ENST00000505560 TOPBP1Q92547 1522 aa5.88□□□□□ -1.47
ZFYVE16-202ENST00000505560 IGF1RP08069 1367 aa5.87□□□□□ -1.47
ZFYVE16-202ENST00000505560 LAMC3Q9Y6N6 1575 aa5.87□□□□□ -1.47
ZFYVE16-202ENST00000505560 TOP2BQ02880 1626 aa5.87□□□□□ -1.47
ZFYVE16-202ENST00000505560 PRXQ9BXM0 1461 aa5.87□□□□□ -1.47
ZFYVE16-202ENST00000505560 SRCAPQ6ZRS2 3230 aa5.86□□□□□ -1.47
ZFYVE16-202ENST00000505560 ZNF608Q9ULD9 1512 aaPredicted RBP5.86□□□□□ -1.47
ZFYVE16-202ENST00000505560 RAD54L2Q9Y4B4 1467 aa5.86□□□□□ -1.47
ZFYVE16-202ENST00000505560 FGD5Q6ZNL6 1462 aa5.84□□□□□ -1.48
ZFYVE16-202ENST00000505560 TARBP1Q13395 1621 aaKnown RBP5.83□□□□□ -1.48
ZFYVE16-202ENST00000505560 BIVM-ERCC5R4GMW8 1640 aa5.83□□□□□ -1.48
ZFYVE16-202ENST00000505560 TDRD9Q8NDG6 1382 aaKnown RBP5.83□□□□□ -1.48
ZFYVE16-202ENST00000505560 ABCA10Q8WWZ4 1543 aa5.82□□□□□ -1.48
ZFYVE16-202ENST00000505560 TRIM41Q8WV44 630 aa5.81□□□□□ -1.48
ZFYVE16-202ENST00000505560 THOC2Q8NI27 1593 aaKnown RBP5.81□□□□□ -1.48
ZFYVE16-202ENST00000505560 KIF21AQ7Z4S6 1674 aa5.8□□□□□ -1.48
ZFYVE16-202ENST00000505560 PDS5BQ9NTI5 1447 aa5.8□□□□□ -1.48
ZFYVE16-202ENST00000505560 RAPGEF2Q9Y4G8 1499 aa5.79□□□□□ -1.48
ZFYVE16-202ENST00000505560 CSRNP3Q8WYN3 585 aa5.79□□□□□ -1.48
ZFYVE16-202ENST00000505560 WDR62O43379 1518 aa5.78□□□□□ -1.48
ZFYVE16-202ENST00000505560 DNMBPQ6XZF7 1577 aa5.78□□□□□ -1.48
ZFYVE16-202ENST00000505560 AQRO60306 1485 aaKnown RBP eCLIP5.77□□□□□ -1.49
ZFYVE16-202ENST00000505560 CEP164Q9UPV0 1460 aa5.77□□□□□ -1.49
ZFYVE16-202ENST00000505560 FAM9AQ8IZU1 332 aaPredicted RBP5.76□□□□□ -1.49
ZFYVE16-202ENST00000505560 WDR97A6NE52 1622 aa5.75□□□□□ -1.49
ZFYVE16-202ENST00000505560 ABCA5Q8WWZ7 1642 aa5.75□□□□□ -1.49
ZFYVE16-202ENST00000505560 PRDM2Q13029 1718 aa5.73□□□□□ -1.49
ZFYVE16-202ENST00000505560 MRC2Q9UBG0 1479 aa5.73□□□□□ -1.49
ZFYVE16-202ENST00000505560 ARAP1Q96P48 1450 aa5.71□□□□□ -1.49
ZFYVE16-202ENST00000505560 EEA1Q15075 1411 aa5.7□□□□□ -1.5
ZFYVE16-202ENST00000505560 KIF27Q86VH2 1401 aa5.69□□□□□ -1.5
ZFYVE16-202ENST00000505560 GAPVD1Q14C86 1478 aa5.69□□□□□ -1.5
ZFYVE16-202ENST00000505560 CARMIL1Q5VZK9 1371 aa5.69□□□□□ -1.5
ZFYVE16-202ENST00000505560 TNIKQ9UKE5 1360 aa5.68□□□□□ -1.5
ZFYVE16-202ENST00000505560 ARHGAP35Q9NRY4 1499 aa5.67□□□□□ -1.5
ZFYVE16-202ENST00000505560 NUP160Q12769 1436 aa5.67□□□□□ -1.5
ZFYVE16-202ENST00000505560 ERICH3Q5RHP9 1530 aa5.66□□□□□ -1.5
ZFYVE16-202ENST00000505560 EIF4G3O43432 1585 aaKnown RBP5.66□□□□□ -1.5
ZFYVE16-202ENST00000505560 KIF21BO75037 1637 aa5.65□□□□□ -1.5
ZFYVE16-202ENST00000505560 IFT140Q96RY7 1462 aa5.65□□□□□ -1.5
ZFYVE16-202ENST00000505560 DISP1Q96F81 1524 aa5.64□□□□□ -1.51
ZFYVE16-202ENST00000505560 CEP162Q5TB80 1403 aa5.64□□□□□ -1.51
ZFYVE16-202ENST00000505560 CLIP1P30622 1438 aa5.64□□□□□ -1.51
ZFYVE16-202ENST00000505560 ERCC6L2Q5T890 1561 aa5.64□□□□□ -1.51
ZFYVE16-202ENST00000505560 GRIN2BQ13224 1484 aa5.63□□□□□ -1.51
ZFYVE16-202ENST00000505560 FHAD1B1AJZ9 1412 aa5.62□□□□□ -1.51
ZFYVE16-202ENST00000505560 EHMT2Q96KQ7 1210 aa5.62□□□□□ -1.51
ZFYVE16-202ENST00000505560 GRIN2AQ12879 1464 aa5.62□□□□□ -1.51
ZFYVE16-202ENST00000505560 ADAMTS12P58397 1594 aa5.61□□□□□ -1.51
ZFYVE16-202ENST00000505560 ERCC6Q03468 1493 aa5.61□□□□□ -1.51
ZFYVE16-202ENST00000505560 SNAPC4Q5SXM2 1469 aa5.61□□□□□ -1.51
ZFYVE16-202ENST00000505560 KANK4Q5T7N3 995 aaPredicted RBP5.6□□□□□ -1.51
ZFYVE16-202ENST00000505560 GOLGA3Q08378 1498 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms