RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 NISCHQ9Y2I1 1504 aa35.11■■■■□ 3.21
UBQLN1-201ENST00000257468 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
UBQLN1-201ENST00000257468 SHROOM4Q9ULL8 1493 aa29.78■■■□□ 2.36
UBQLN1-201ENST00000257468 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
UBQLN1-201ENST00000257468 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
UBQLN1-201ENST00000257468 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
UBQLN1-201ENST00000257468 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
UBQLN1-201ENST00000257468 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
UBQLN1-201ENST00000257468 ABCC9O60706 1549 aa28.15■■■□□ 2.1
UBQLN1-201ENST00000257468 CHIC1Q5VXU3 224 aa28.11■■■□□ 2.09
UBQLN1-201ENST00000257468 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
UBQLN1-201ENST00000257468 NACADO15069 1562 aa28.05■■■□□ 2.08
UBQLN1-201ENST00000257468 RB1CC1Q8TDY2 1594 aa27.7■■■□□ 2.03
UBQLN1-201ENST00000257468 RSF1Q96T23 1441 aaPredicted RBP27.68■■■□□ 2.02
UBQLN1-201ENST00000257468 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
UBQLN1-201ENST00000257468 MROH2BQ7Z745 1585 aa27.31■■□□□ 1.96
UBQLN1-201ENST00000257468 LOC105371045A0A1W2PR82 267 aa27.29■■□□□ 1.96
UBQLN1-201ENST00000257468 UNC13AQ9UPW8 1703 aa27.2■■□□□ 1.95
UBQLN1-201ENST00000257468 WIZO95785 1651 aa27.18■■□□□ 1.94
UBQLN1-201ENST00000257468 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
UBQLN1-201ENST00000257468 BAZ1AQ9NRL2 1556 aaPredicted RBP26.98■■□□□ 1.91
UBQLN1-201ENST00000257468 PCGF6Q9BYE7 350 aa26.98■■□□□ 1.91
UBQLN1-201ENST00000257468 BICRAQ9NZM4 1560 aa26.9■■□□□ 1.9
UBQLN1-201ENST00000257468 FAM9AQ8IZU1 332 aaPredicted RBP26.86■■□□□ 1.89
UBQLN1-201ENST00000257468 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
UBQLN1-201ENST00000257468 HRCP23327 699 aa26.78■■□□□ 1.88
UBQLN1-201ENST00000257468 PABPN1Q86U42 306 aaKnown RBP eCLIP26.71■■□□□ 1.87
UBQLN1-201ENST00000257468 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
UBQLN1-201ENST00000257468 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.87
UBQLN1-201ENST00000257468 EHMT2Q96KQ7 1210 aa26.67■■□□□ 1.86
UBQLN1-201ENST00000257468 CCDC88BA6NC98 1476 aa26.59■■□□□ 1.85
UBQLN1-201ENST00000257468 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
UBQLN1-201ENST00000257468 TRIM26Q12899 539 aaPredicted RBP26.49■■□□□ 1.83
UBQLN1-201ENST00000257468 ABCC8Q09428 1581 aa26.48■■□□□ 1.83
UBQLN1-201ENST00000257468 PEG3Q9GZU2 1588 aa26.39■■□□□ 1.82
UBQLN1-201ENST00000257468 PPARGC1BQ86YN6 1023 aaKnown RBP26.34■■□□□ 1.81
UBQLN1-201ENST00000257468 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
UBQLN1-201ENST00000257468 SOGA1O94964 1423 aa26.15■■□□□ 1.78
UBQLN1-201ENST00000257468 BAZ1BQ9UIG0 1483 aaKnown RBP26.08■■□□□ 1.77
UBQLN1-201ENST00000257468 RUSC2Q8N2Y8 1516 aa26.06■■□□□ 1.76
UBQLN1-201ENST00000257468 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.75
UBQLN1-201ENST00000257468 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
UBQLN1-201ENST00000257468 CSRNP3Q8WYN3 585 aa25.91■■□□□ 1.74
UBQLN1-201ENST00000257468 EEA1Q15075 1411 aa25.9■■□□□ 1.74
UBQLN1-201ENST00000257468 CEP162Q5TB80 1403 aa25.89■■□□□ 1.74
UBQLN1-201ENST00000257468 HMGXB3Q12766 1538 aa25.89■■□□□ 1.73
UBQLN1-201ENST00000257468 NCAPD3P42695 1498 aa25.88■■□□□ 1.73
UBQLN1-201ENST00000257468 TNIKQ9UKE5 1360 aa25.83■■□□□ 1.73
UBQLN1-201ENST00000257468 UBTFP17480 764 aaKnown RBP25.8■■□□□ 1.72
UBQLN1-201ENST00000257468 GOLGA3Q08378 1498 aa25.76■■□□□ 1.71
UBQLN1-201ENST00000257468 TTBK1Q5TCY1 1321 aaPredicted RBP25.74■■□□□ 1.71
UBQLN1-201ENST00000257468 ZEB1P37275 1124 aaPredicted RBP25.74■■□□□ 1.71
UBQLN1-201ENST00000257468 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
UBQLN1-201ENST00000257468 KIF21BO75037 1637 aa25.63■■□□□ 1.69
UBQLN1-201ENST00000257468 TOP2BQ02880 1626 aa25.62■■□□□ 1.69
UBQLN1-201ENST00000257468 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
UBQLN1-201ENST00000257468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.54■■□□□ 1.68
UBQLN1-201ENST00000257468 BIVM-ERCC5R4GMW8 1640 aa25.54■■□□□ 1.68
UBQLN1-201ENST00000257468 RAPGEF2Q9Y4G8 1499 aa25.52■■□□□ 1.68
UBQLN1-201ENST00000257468 CLIP1P30622 1438 aa25.46■■□□□ 1.67
UBQLN1-201ENST00000257468 CUX1P39880 1505 aa25.44■■□□□ 1.66
UBQLN1-201ENST00000257468 CCER1Q8TC90 406 aaPredicted RBP25.42■■□□□ 1.66
UBQLN1-201ENST00000257468 CFTRP13569 1480 aa25.41■■□□□ 1.66
UBQLN1-201ENST00000257468 RANGAP1P46060 587 aaPredicted RBP25.41■■□□□ 1.66
UBQLN1-201ENST00000257468 PRDM2Q13029 1718 aa25.33■■□□□ 1.65
UBQLN1-201ENST00000257468 VPS8Q8N3P4 1428 aa25.31■■□□□ 1.64
UBQLN1-201ENST00000257468 PRXQ9BXM0 1461 aa25.28■■□□□ 1.64
UBQLN1-201ENST00000257468 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
UBQLN1-201ENST00000257468 KIF27Q86VH2 1401 aa25.21■■□□□ 1.63
UBQLN1-201ENST00000257468 CADPSQ9ULU8 1353 aa25.19■■□□□ 1.62
UBQLN1-201ENST00000257468 APLP2Q06481 763 aa25.12■■□□□ 1.61
UBQLN1-201ENST00000257468 ARAP1Q96P48 1450 aa25.11■■□□□ 1.61
UBQLN1-201ENST00000257468 HNRNPUL2Q1KMD3 747 aaKnown RBP25.1■■□□□ 1.61
UBQLN1-201ENST00000257468 CUX2O14529 1486 aa25.06■■□□□ 1.6
UBQLN1-201ENST00000257468 FGD5Q6ZNL6 1462 aa25.02■■□□□ 1.6
UBQLN1-201ENST00000257468 IGF1RP08069 1367 aa24.97■■□□□ 1.59
UBQLN1-201ENST00000257468 FANCD2Q9BXW9 1451 aa24.95■■□□□ 1.58
UBQLN1-201ENST00000257468 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
UBQLN1-201ENST00000257468 ARHGAP35Q9NRY4 1499 aa24.93■■□□□ 1.58
UBQLN1-201ENST00000257468 KANK4Q5T7N3 995 aaPredicted RBP24.93■■□□□ 1.58
UBQLN1-201ENST00000257468 NESP48681 1621 aa24.9■■□□□ 1.58
UBQLN1-201ENST00000257468 CARMIL1Q5VZK9 1371 aa24.85■■□□□ 1.57
UBQLN1-201ENST00000257468 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
UBQLN1-201ENST00000257468 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
UBQLN1-201ENST00000257468 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
UBQLN1-201ENST00000257468 DIEXFQ68CQ4 756 aaKnown RBP24.77■■□□□ 1.56
UBQLN1-201ENST00000257468 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
UBQLN1-201ENST00000257468 DNAJC5BQ9UF47 199 aa24.73■■□□□ 1.55
UBQLN1-201ENST00000257468 ABCA10Q8WWZ4 1543 aa24.69■■□□□ 1.54
UBQLN1-201ENST00000257468 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
UBQLN1-201ENST00000257468 RRBP1Q9P2E9 1410 aaKnown RBP24.68■■□□□ 1.54
UBQLN1-201ENST00000257468 ZNF316A6NFI3 1004 aaPredicted RBP24.65■■□□□ 1.54
UBQLN1-201ENST00000257468 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
UBQLN1-201ENST00000257468 P3H3Q8IVL6 736 aa24.63■■□□□ 1.53
UBQLN1-201ENST00000257468 TIAM1Q13009 1591 aa24.61■■□□□ 1.53
UBQLN1-201ENST00000257468 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
UBQLN1-201ENST00000257468 CCNB3Q8WWL7 1395 aa24.59■■□□□ 1.53
UBQLN1-201ENST00000257468 DHX57Q6P158 1386 aaKnown RBP24.58■■□□□ 1.52
UBQLN1-201ENST00000257468 ITGAEP38570 1179 aa24.55■■□□□ 1.52
UBQLN1-201ENST00000257468 WDR97A6NE52 1622 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms