RNA–Protein interactions for RNA: ENST00000473104.5

SH3YL1-219, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 1 (best)

Gene SH3YL1, Length 2,463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-219ENST00000473104 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
SH3YL1-219ENST00000473104 CCDC180Q9P1Z9 1646 aa16.94■□□□□ 0.3
SH3YL1-219ENST00000473104 PELP1Q8IZL8 1130 aaKnown RBP16.74■□□□□ 0.27
SH3YL1-219ENST00000473104 MYT1Q01538 1121 aa16.32■□□□□ 0.2
SH3YL1-219ENST00000473104 ZCCHC6Q5VYS8 1495 aaKnown RBP16.28■□□□□ 0.2
SH3YL1-219ENST00000473104 HRCP23327 699 aa16.15■□□□□ 0.18
SH3YL1-219ENST00000473104 ABCC9O60706 1549 aa16.14■□□□□ 0.17
SH3YL1-219ENST00000473104 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
SH3YL1-219ENST00000473104 DCAF1Q9Y4B6 1507 aa16.03■□□□□ 0.16
SH3YL1-219ENST00000473104 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
SH3YL1-219ENST00000473104 MYO15BQ96JP2 1530 aa15.87■□□□□ 0.13
SH3YL1-219ENST00000473104 NACADO15069 1562 aa15.81■□□□□ 0.12
SH3YL1-219ENST00000473104 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
SH3YL1-219ENST00000473104 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.12
SH3YL1-219ENST00000473104 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
SH3YL1-219ENST00000473104 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
SH3YL1-219ENST00000473104 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
SH3YL1-219ENST00000473104 SCRIBQ14160 1630 aa15.59■□□□□ 0.09
SH3YL1-219ENST00000473104 TTBK1Q5TCY1 1321 aaPredicted RBP15.57■□□□□ 0.08
SH3YL1-219ENST00000473104 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
SH3YL1-219ENST00000473104 PCGF6Q9BYE7 350 aa15.4■□□□□ 0.06
SH3YL1-219ENST00000473104 AEBP2Q6ZN18 517 aaPredicted RBP15.27■□□□□ 0.04
SH3YL1-219ENST00000473104 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
SH3YL1-219ENST00000473104 PRKCSHP14314 528 aaPredicted RBP15.24■□□□□ 0.03
SH3YL1-219ENST00000473104 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.037e-9■■■□□ 17.2
SH3YL1-219ENST00000473104 EHMT2Q96KQ7 1210 aa15.23■□□□□ 0.03
SH3YL1-219ENST00000473104 BCL11AQ9H165 835 aa15.2■□□□□ 0.02
SH3YL1-219ENST00000473104 SUPT5HO00267 1087 aaKnown RBP15.17■□□□□ 0.02
SH3YL1-219ENST00000473104 CECR2Q9BXF3 1484 aa15.11■□□□□ 0.01
SH3YL1-219ENST00000473104 ACIN1Q9UKV3 1341 aaKnown RBP15.08■□□□□ 0
SH3YL1-219ENST00000473104 FAM9AQ8IZU1 332 aaPredicted RBP15.07■□□□□ 0
SH3YL1-219ENST00000473104 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
SH3YL1-219ENST00000473104 NEUROD1Q13562 356 aa15□□□□□ -0.01
SH3YL1-219ENST00000473104 MROH2BQ7Z745 1585 aa15□□□□□ -0.01
SH3YL1-219ENST00000473104 GTF3C3Q9Y5Q9 886 aa14.99□□□□□ -0.01
SH3YL1-219ENST00000473104 BAZ1AQ9NRL2 1556 aaPredicted RBP14.98□□□□□ -0.01
SH3YL1-219ENST00000473104 CENPBP07199 599 aaPredicted RBP14.94□□□□□ -0.02
SH3YL1-219ENST00000473104 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
SH3YL1-219ENST00000473104 WIZO95785 1651 aa14.87□□□□□ -0.03
SH3YL1-219ENST00000473104 ZEB1P37275 1124 aaPredicted RBP14.86□□□□□ -0.03
SH3YL1-219ENST00000473104 ERICH6Q7L0X2 663 aa14.82□□□□□ -0.04
SH3YL1-219ENST00000473104 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
SH3YL1-219ENST00000473104 EIF4G1Q04637 1599 aaKnown RBP14.79□□□□□ -0.04
SH3YL1-219ENST00000473104 APLP2Q06481 763 aa14.77□□□□□ -0.05
SH3YL1-219ENST00000473104 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
SH3YL1-219ENST00000473104 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
SH3YL1-219ENST00000473104 TRIM26Q12899 539 aaPredicted RBP14.7□□□□□ -0.06
SH3YL1-219ENST00000473104 SMARCA2P51531 1590 aa14.69□□□□□ -0.06
SH3YL1-219ENST00000473104 TOP2AP11388 1531 aaKnown RBP14.69□□□□□ -0.06
SH3YL1-219ENST00000473104 ANP32EQ9BTT0 268 aa14.67□□□□□ -0.06
SH3YL1-219ENST00000473104 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
SH3YL1-219ENST00000473104 NCAPD3P42695 1498 aa14.61□□□□□ -0.07
SH3YL1-219ENST00000473104 CC2D2AQ9P2K1 1620 aa14.6□□□□□ -0.07
SH3YL1-219ENST00000473104 PHF23Q9BUL5 403 aaPredicted RBP14.58□□□□□ -0.07
SH3YL1-219ENST00000473104 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
SH3YL1-219ENST00000473104 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
SH3YL1-219ENST00000473104 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
SH3YL1-219ENST00000473104 RTN4Q9NQC3 1192 aaKnown RBP14.49□□□□□ -0.09
SH3YL1-219ENST00000473104 DIEXFQ68CQ4 756 aaKnown RBP14.37□□□□□ -0.11
SH3YL1-219ENST00000473104 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
SH3YL1-219ENST00000473104 LOC105371045A0A1W2PR82 267 aa14.29□□□□□ -0.12
SH3YL1-219ENST00000473104 CFTRP13569 1480 aa14.26□□□□□ -0.13
SH3YL1-219ENST00000473104 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
SH3YL1-219ENST00000473104 TSHZ2Q9NRE2 1034 aa14.25□□□□□ -0.13
SH3YL1-219ENST00000473104 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
SH3YL1-219ENST00000473104 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
SH3YL1-219ENST00000473104 YTHDC1Q96MU7 727 aaKnown RBP14.22□□□□□ -0.13
SH3YL1-219ENST00000473104 ANO8Q9HCE9 1232 aaPredicted RBP14.17□□□□□ -0.14
SH3YL1-219ENST00000473104 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
SH3YL1-219ENST00000473104 NESP48681 1621 aa14.15□□□□□ -0.14
SH3YL1-219ENST00000473104 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
SH3YL1-219ENST00000473104 KCNA4P22459 653 aa14.13□□□□□ -0.15
SH3YL1-219ENST00000473104 LAMC3Q9Y6N6 1575 aa14.11□□□□□ -0.15
SH3YL1-219ENST00000473104 SUPT16HQ9Y5B9 1047 aaKnown RBP14.09□□□□□ -0.15
SH3YL1-219ENST00000473104 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
SH3YL1-219ENST00000473104 FANCD2Q9BXW9 1451 aa14.07□□□□□ -0.16
SH3YL1-219ENST00000473104 TOP2BQ02880 1626 aa14.03□□□□□ -0.16
SH3YL1-219ENST00000473104 CUX1P39880 1505 aa14.02□□□□□ -0.16
SH3YL1-219ENST00000473104 PDS5BQ9NTI5 1447 aa14.02□□□□□ -0.17
SH3YL1-219ENST00000473104 BIVM-ERCC5R4GMW8 1640 aa14.01□□□□□ -0.17
SH3YL1-219ENST00000473104 CLSPNQ9HAW4 1339 aa14□□□□□ -0.17
SH3YL1-219ENST00000473104 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
SH3YL1-219ENST00000473104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
SH3YL1-219ENST00000473104 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
SH3YL1-219ENST00000473104 CCER1Q8TC90 406 aaPredicted RBP13.97□□□□□ -0.17
SH3YL1-219ENST00000473104 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.17
SH3YL1-219ENST00000473104 SOGA1O94964 1423 aa13.96□□□□□ -0.17
SH3YL1-219ENST00000473104 MIER1Q8N108 512 aa13.95□□□□□ -0.18
SH3YL1-219ENST00000473104 RUSC2Q8N2Y8 1516 aa13.92□□□□□ -0.18
SH3YL1-219ENST00000473104 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
SH3YL1-219ENST00000473104 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
SH3YL1-219ENST00000473104 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
SH3YL1-219ENST00000473104 TOPBP1Q92547 1522 aa13.91□□□□□ -0.18
SH3YL1-219ENST00000473104 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
SH3YL1-219ENST00000473104 EIF5BO60841 1220 aaKnown RBP13.9□□□□□ -0.18
SH3YL1-219ENST00000473104 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
SH3YL1-219ENST00000473104 EEA1Q15075 1411 aa13.87□□□□□ -0.19
SH3YL1-219ENST00000473104 CCDC136Q96JN2 1154 aa13.84□□□□□ -0.19
SH3YL1-219ENST00000473104 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
SH3YL1-219ENST00000473104 ERCC6Q03468 1493 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms