RNA–Protein interactions for RNA: ENST00000456735.6

NF1-205, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 7,787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-205ENST00000456735 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
NF1-205ENST00000456735 FAM9AQ8IZU1 332 aaPredicted RBP9.91□□□□□ -0.82
NF1-205ENST00000456735 NISCHQ9Y2I1 1504 aa9.68□□□□□ -0.86
NF1-205ENST00000456735 SUPT5HO00267 1087 aaKnown RBP9.64□□□□□ -0.87
NF1-205ENST00000456735 APLP2Q06481 763 aa9.57□□□□□ -0.88
NF1-205ENST00000456735 SHROOM4Q9ULL8 1493 aa9.43□□□□□ -0.9
NF1-205ENST00000456735 EHMT2Q96KQ7 1210 aa9.38□□□□□ -0.91
NF1-205ENST00000456735 ATP1B4Q9UN42 357 aaPredicted RBP9.27□□□□□ -0.92
NF1-205ENST00000456735 MYT1LQ9UL68 1186 aa9.22□□□□□ -0.93
NF1-205ENST00000456735 PELP1Q8IZL8 1130 aaKnown RBP9.18□□□□□ -0.94
NF1-205ENST00000456735 RANGAP1P46060 587 aaPredicted RBP9.17□□□□□ -0.94
NF1-205ENST00000456735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.09□□□□□ -0.95
NF1-205ENST00000456735 HNRNPUL2Q1KMD3 747 aaKnown RBP9.09□□□□□ -0.95
NF1-205ENST00000456735 UBTFP17480 764 aaKnown RBP9.05□□□□□ -0.96
NF1-205ENST00000456735 TTBK1Q5TCY1 1321 aaPredicted RBP9.04□□□□□ -0.96
NF1-205ENST00000456735 TRIM41Q8WV44 630 aa9.02□□□□□ -0.97
NF1-205ENST00000456735 CHIC1Q5VXU3 224 aa8.9□□□□□ -0.98
NF1-205ENST00000456735 CCER1Q8TC90 406 aaPredicted RBP8.81□□□□□ -1
NF1-205ENST00000456735 FBLN2P98095 1184 aa8.8□□□□□ -1
NF1-205ENST00000456735 PCGF6Q9BYE7 350 aa8.8□□□□□ -1
NF1-205ENST00000456735 ABCC9O60706 1549 aa8.78□□□□□ -1
NF1-205ENST00000456735 SLC4A1APQ9BWU0 796 aaKnown RBP8.78□□□□□ -1
NF1-205ENST00000456735 PABPN1Q86U42 306 aaKnown RBP eCLIP8.77□□□□□ -1
NF1-205ENST00000456735 ESF1Q9H501 851 aaKnown RBP8.75□□□□□ -1.01
NF1-205ENST00000456735 POLR3GLQ9BT43 218 aa8.72□□□□□ -1.01
NF1-205ENST00000456735 NPM1P06748 294 aaKnown RBP eCLIP8.71□□□□□ -1.01
NF1-205ENST00000456735 BCANQ96GW7 911 aa8.71□□□□□ -1.02
NF1-205ENST00000456735 ERICH6Q7L0X2 663 aa8.7□□□□□ -1.02
NF1-205ENST00000456735 ITGAEP38570 1179 aa8.68□□□□□ -1.02
NF1-205ENST00000456735 NEFLP07196 543 aa8.68□□□□□ -1.02
NF1-205ENST00000456735 ZEB1P37275 1124 aaPredicted RBP8.66□□□□□ -1.02
NF1-205ENST00000456735 CENPBP07199 599 aaPredicted RBP8.6□□□□□ -1.03
NF1-205ENST00000456735 TRIM52Q96A61 297 aa8.55□□□□□ -1.04
NF1-205ENST00000456735 STAG3Q9UJ98 1225 aa8.55□□□□□ -1.04
NF1-205ENST00000456735 PLPPR3Q6T4P5 718 aa8.54□□□□□ -1.04
NF1-205ENST00000456735 DAXXQ9UER7 740 aaPredicted RBP8.54□□□□□ -1.04
NF1-205ENST00000456735 CDK11AQ9UQ88 783 aaPredicted RBP8.54□□□□□ -1.04
NF1-205ENST00000456735 SLC24A1O60721 1099 aa8.53□□□□□ -1.04
NF1-205ENST00000456735 NEFMP07197 916 aa8.53□□□□□ -1.04
NF1-205ENST00000456735 FAM50AQ14320 339 aaKnown RBP8.51□□□□□ -1.05
NF1-205ENST00000456735 CNGB1Q14028 1251 aaPredicted RBP8.49□□□□□ -1.05
NF1-205ENST00000456735 ZBTB47Q9UFB7 747 aaPredicted RBP8.48□□□□□ -1.05
NF1-205ENST00000456735 PPARGC1BQ86YN6 1023 aaKnown RBP8.46□□□□□ -1.05
NF1-205ENST00000456735 ZNF777Q9ULD5 760 aaPredicted RBP8.42□□□□□ -1.06
NF1-205ENST00000456735 ZNF326Q5BKZ1 582 aaKnown RBP8.41□□□□□ -1.06
NF1-205ENST00000456735 CLSPNQ9HAW4 1339 aa8.41□□□□□ -1.06
NF1-205ENST00000456735 CHGAP10645 457 aaKnown RBP8.4□□□□□ -1.06
NF1-205ENST00000456735 ARID3CA6NKF2 412 aa8.4□□□□□ -1.06
NF1-205ENST00000456735 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
NF1-205ENST00000456735 SCAF1Q9H7N4 1312 aaKnown RBP8.37□□□□□ -1.07
NF1-205ENST00000456735 TRHP20396 242 aaPredicted RBP8.36□□□□□ -1.07
NF1-205ENST00000456735 NPM2Q86SE8 214 aaKnown RBP8.36□□□□□ -1.07
NF1-205ENST00000456735 YTHDC1Q96MU7 727 aaKnown RBP8.35□□□□□ -1.07
NF1-205ENST00000456735 C14orf37Q86TY3 774 aa8.35□□□□□ -1.07
NF1-205ENST00000456735 ARID4BQ4LE39 1312 aaPredicted RBP8.34□□□□□ -1.07
NF1-205ENST00000456735 A0A0G2JS52 829 aa8.34□□□□□ -1.07
NF1-205ENST00000456735 P3H3Q8IVL6 736 aa8.33□□□□□ -1.08
NF1-205ENST00000456735 HAP1P54257 671 aaPredicted RBP8.32□□□□□ -1.08
NF1-205ENST00000456735 TRIM26Q12899 539 aaPredicted RBP8.3□□□□□ -1.08
NF1-205ENST00000456735 PPP1R15AO75807 674 aaPredicted RBP8.29□□□□□ -1.08
NF1-205ENST00000456735 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
NF1-205ENST00000456735 NEUROD1Q13562 356 aa8.28□□□□□ -1.08
NF1-205ENST00000456735 ZNF316A6NFI3 1004 aaPredicted RBP8.26□□□□□ -1.09
NF1-205ENST00000456735 TSPY4P0CV99 314 aa8.26□□□□□ -1.09
NF1-205ENST00000456735 TSPY10P0CW01 314 aa8.26□□□□□ -1.09
NF1-205ENST00000456735 ERCC6Q03468 1493 aa8.24□□□□□ -1.09
NF1-205ENST00000456735 SCRIBQ14160 1630 aa8.22□□□□□ -1.09
NF1-205ENST00000456735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.21□□□□□ -1.11e-7■■■■□ 20.8
NF1-205ENST00000456735 BCL11AQ9H165 835 aa8.21□□□□□ -1.1
NF1-205ENST00000456735 AEBP2Q6ZN18 517 aaPredicted RBP8.21□□□□□ -1.1
NF1-205ENST00000456735 KCNH8Q96L42 1107 aa8.2□□□□□ -1.1
NF1-205ENST00000456735 CSRNP3Q8WYN3 585 aa8.19□□□□□ -1.1
NF1-205ENST00000456735 MYT1Q01538 1121 aa8.19□□□□□ -1.1
NF1-205ENST00000456735 ZBTB7CA1YPR0 619 aa8.18□□□□□ -1.1
NF1-205ENST00000456735 LOC105371045A0A1W2PR82 267 aa8.17□□□□□ -1.1
NF1-205ENST00000456735 PLEKHD1A6NEE1 506 aa8.17□□□□□ -1.1
NF1-205ENST00000456735 ANP32CO43423 234 aa8.16□□□□□ -1.1
NF1-205ENST00000456735 PLEKHG5O94827 1062 aa8.15□□□□□ -1.1
NF1-205ENST00000456735 NPHP1O15259 732 aa8.12□□□□□ -1.11
NF1-205ENST00000456735 HDGFP51858 240 aaKnown RBP8.12□□□□□ -1.11
NF1-205ENST00000456735 RB1CC1Q8TDY2 1594 aa8.12□□□□□ -1.11
NF1-205ENST00000456735 LMOD2Q6P5Q4 547 aa8.1□□□□□ -1.11
NF1-205ENST00000456735 MTUS2Q5JR59 1369 aa8.08□□□□□ -1.12
NF1-205ENST00000456735 ARXQ96QS3 562 aa8.08□□□□□ -1.12
NF1-205ENST00000456735 RTL5Q5HYW3 569 aaPredicted RBP8.07□□□□□ -1.12
NF1-205ENST00000456735 ACIN1Q9UKV3 1341 aaKnown RBP8.05□□□□□ -1.12
NF1-205ENST00000456735 TONSLQ96HA7 1378 aa8.05□□□□□ -1.12
NF1-205ENST00000456735 CHIC2Q9UKJ5 165 aa8.05□□□□□ -1.12
NF1-205ENST00000456735 CDK11BP21127 795 aaKnown RBP8.04□□□□□ -1.12
NF1-205ENST00000456735 SENP3Q9H4L4 574 aaPredicted RBP8.03□□□□□ -1.12
NF1-205ENST00000456735 MLECQ14165 292 aa8.03□□□□□ -1.12
NF1-205ENST00000456735 HRCP23327 699 aa8.01□□□□□ -1.13
NF1-205ENST00000456735 EIF4G2P78344 907 aaKnown RBP eCLIP8.01□□□□□ -1.13
NF1-205ENST00000456735 POGKQ9P215 609 aa8.01□□□□□ -1.13
NF1-205ENST00000456735 WDR43Q15061 677 aaKnown RBP eCLIP8□□□□□ -1.13
NF1-205ENST00000456735 KDM2AQ9Y2K7 1162 aa8□□□□□ -1.13
NF1-205ENST00000456735 RSF1Q96T23 1441 aaPredicted RBP8□□□□□ -1.13
NF1-205ENST00000456735 CFDP1Q9UEE9 299 aaPredicted RBP7.99□□□□□ -1.13
NF1-205ENST00000456735 MYH16Q9H6N6 1097 aa7.99□□□□□ -1.13
NF1-205ENST00000456735 TMC1Q8TDI8 760 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms