RNA–Protein interactions for RNA: ENST00000440395.1

TRAF3IP2-AS1-204, TRAF3IP2 antisense RNA 1, humanhuman

TSL 3

Gene TRAF3IP2-AS1, Length 439 nt, Biotype antisense RNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-AS1-204ENST00000440395 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
TRAF3IP2-AS1-204ENST00000440395 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
TRAF3IP2-AS1-204ENST00000440395 NISCHQ9Y2I1 1504 aa15.58■□□□□ 0.09
TRAF3IP2-AS1-204ENST00000440395 ABCC9O60706 1549 aa14.62□□□□□ -0.07
TRAF3IP2-AS1-204ENST00000440395 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
TRAF3IP2-AS1-204ENST00000440395 PHF23Q9BUL5 403 aaPredicted RBP14.05□□□□□ -0.16
TRAF3IP2-AS1-204ENST00000440395 SENP3Q9H4L4 574 aaPredicted RBP13.98□□□□□ -0.17
TRAF3IP2-AS1-204ENST00000440395 CCDC180Q9P1Z9 1646 aa13.9□□□□□ -0.18
TRAF3IP2-AS1-204ENST00000440395 DCAF8L2P0C7V8 631 aa13.66□□□□□ -0.22
TRAF3IP2-AS1-204ENST00000440395 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAF3IP2-AS1-204ENST00000440395 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
TRAF3IP2-AS1-204ENST00000440395 DNAJC5Q9H3Z4 198 aa13.41□□□□□ -0.26
TRAF3IP2-AS1-204ENST00000440395 NACADO15069 1562 aa13.34□□□□□ -0.27
TRAF3IP2-AS1-204ENST00000440395 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
TRAF3IP2-AS1-204ENST00000440395 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
TRAF3IP2-AS1-204ENST00000440395 ZCCHC6Q5VYS8 1495 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP2-AS1-204ENST00000440395 BICRAQ9NZM4 1560 aa13.09□□□□□ -0.31
TRAF3IP2-AS1-204ENST00000440395 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
TRAF3IP2-AS1-204ENST00000440395 FOXD1Q16676 465 aa13.03□□□□□ -0.32
TRAF3IP2-AS1-204ENST00000440395 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
TRAF3IP2-AS1-204ENST00000440395 DCAF1Q9Y4B6 1507 aa12.9□□□□□ -0.34
TRAF3IP2-AS1-204ENST00000440395 PLPPR3Q6T4P5 718 aa12.87□□□□□ -0.35
TRAF3IP2-AS1-204ENST00000440395 MYO15BQ96JP2 1530 aa12.87□□□□□ -0.35
TRAF3IP2-AS1-204ENST00000440395 SHROOM4Q9ULL8 1493 aa12.85□□□□□ -0.35
TRAF3IP2-AS1-204ENST00000440395 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
TRAF3IP2-AS1-204ENST00000440395 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
TRAF3IP2-AS1-204ENST00000440395 ERCC6Q03468 1493 aa12.74□□□□□ -0.37
TRAF3IP2-AS1-204ENST00000440395 CUX2O14529 1486 aa12.72□□□□□ -0.37
TRAF3IP2-AS1-204ENST00000440395 PPP6R1Q9UPN7 881 aa12.45□□□□□ -0.42
TRAF3IP2-AS1-204ENST00000440395 SUPT5HO00267 1087 aaKnown RBP12.43□□□□□ -0.42
TRAF3IP2-AS1-204ENST00000440395 ADRA2BP18089 450 aa12.41□□□□□ -0.42
TRAF3IP2-AS1-204ENST00000440395 NESP48681 1621 aa12.36□□□□□ -0.43
TRAF3IP2-AS1-204ENST00000440395 NCAPD3P42695 1498 aa12.32□□□□□ -0.44
TRAF3IP2-AS1-204ENST00000440395 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
TRAF3IP2-AS1-204ENST00000440395 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
TRAF3IP2-AS1-204ENST00000440395 ATAD2BQ9ULI0 1458 aa12.23□□□□□ -0.45
TRAF3IP2-AS1-204ENST00000440395 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
TRAF3IP2-AS1-204ENST00000440395 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
TRAF3IP2-AS1-204ENST00000440395 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
TRAF3IP2-AS1-204ENST00000440395 THOC2Q8NI27 1593 aaKnown RBP12.2□□□□□ -0.46
TRAF3IP2-AS1-204ENST00000440395 BAZ1BQ9UIG0 1483 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-AS1-204ENST00000440395 LAMC3Q9Y6N6 1575 aa12.14□□□□□ -0.47
TRAF3IP2-AS1-204ENST00000440395 RSF1Q96T23 1441 aaPredicted RBP12.14□□□□□ -0.47
TRAF3IP2-AS1-204ENST00000440395 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
TRAF3IP2-AS1-204ENST00000440395 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
TRAF3IP2-AS1-204ENST00000440395 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
TRAF3IP2-AS1-204ENST00000440395 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
TRAF3IP2-AS1-204ENST00000440395 SMARCA4P51532 1647 aa12.06□□□□□ -0.48
TRAF3IP2-AS1-204ENST00000440395 MRC2Q9UBG0 1479 aa12.05□□□□□ -0.48
TRAF3IP2-AS1-204ENST00000440395 MSH5O43196 834 aa12.04□□□□□ -0.48
TRAF3IP2-AS1-204ENST00000440395 MROH2BQ7Z745 1585 aa12.04□□□□□ -0.48
TRAF3IP2-AS1-204ENST00000440395 CADPSQ9ULU8 1353 aa12.01□□□□□ -0.49
TRAF3IP2-AS1-204ENST00000440395 RIMBP3CA6NJZ7 1639 aa11.97□□□□□ -0.49
TRAF3IP2-AS1-204ENST00000440395 RIMBP3BA6NNM3 1639 aa11.97□□□□□ -0.49
TRAF3IP2-AS1-204ENST00000440395 RIMBP3Q9UFD9 1639 aa11.97□□□□□ -0.49
TRAF3IP2-AS1-204ENST00000440395 WIZO95785 1651 aa11.96□□□□□ -0.5
TRAF3IP2-AS1-204ENST00000440395 WDR62O43379 1518 aa11.95□□□□□ -0.5
TRAF3IP2-AS1-204ENST00000440395 CEP164Q9UPV0 1460 aa11.94□□□□□ -0.5
TRAF3IP2-AS1-204ENST00000440395 FBLN2P98095 1184 aa11.9□□□□□ -0.5
TRAF3IP2-AS1-204ENST00000440395 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
TRAF3IP2-AS1-204ENST00000440395 FANCD2Q9BXW9 1451 aa11.87□□□□□ -0.51
TRAF3IP2-AS1-204ENST00000440395 TOP2AP11388 1531 aaKnown RBP11.86□□□□□ -0.51
TRAF3IP2-AS1-204ENST00000440395 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
TRAF3IP2-AS1-204ENST00000440395 URB2Q14146 1524 aaKnown RBP11.73□□□□□ -0.53
TRAF3IP2-AS1-204ENST00000440395 CCDC88BA6NC98 1476 aa11.72□□□□□ -0.53
TRAF3IP2-AS1-204ENST00000440395 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
TRAF3IP2-AS1-204ENST00000440395 ARAP1Q96P48 1450 aa11.7□□□□□ -0.54
TRAF3IP2-AS1-204ENST00000440395 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
TRAF3IP2-AS1-204ENST00000440395 CFTRP13569 1480 aa11.68□□□□□ -0.54
TRAF3IP2-AS1-204ENST00000440395 ILDR1Q86SU0 546 aaPredicted RBP11.65□□□□□ -0.54
TRAF3IP2-AS1-204ENST00000440395 CHMP7Q8WUX9 453 aaPredicted RBP11.65□□□□□ -0.54
TRAF3IP2-AS1-204ENST00000440395 AQRO60306 1485 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAF3IP2-AS1-204ENST00000440395 CHD1O14646 1710 aa11.61□□□□□ -0.55
TRAF3IP2-AS1-204ENST00000440395 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.56
TRAF3IP2-AS1-204ENST00000440395 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
TRAF3IP2-AS1-204ENST00000440395 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
TRAF3IP2-AS1-204ENST00000440395 TDRD9Q8NDG6 1382 aaKnown RBP11.51□□□□□ -0.57
TRAF3IP2-AS1-204ENST00000440395 LOC105371045A0A1W2PR82 267 aa11.5□□□□□ -0.57
TRAF3IP2-AS1-204ENST00000440395 SYNJ1O43426 1573 aa11.47□□□□□ -0.57
TRAF3IP2-AS1-204ENST00000440395 FAM9AQ8IZU1 332 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP2-AS1-204ENST00000440395 PRDM2Q13029 1718 aa11.46□□□□□ -0.57
TRAF3IP2-AS1-204ENST00000440395 GAPVD1Q14C86 1478 aa11.45□□□□□ -0.58
TRAF3IP2-AS1-204ENST00000440395 SOGA1O94964 1423 aa11.45□□□□□ -0.58
TRAF3IP2-AS1-204ENST00000440395 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
TRAF3IP2-AS1-204ENST00000440395 DNMBPQ6XZF7 1577 aa11.44□□□□□ -0.58
TRAF3IP2-AS1-204ENST00000440395 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
TRAF3IP2-AS1-204ENST00000440395 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRAF3IP2-AS1-204ENST00000440395 RAD54L2Q9Y4B4 1467 aa11.43□□□□□ -0.58
TRAF3IP2-AS1-204ENST00000440395 TARBP1Q13395 1621 aaKnown RBP11.4□□□□□ -0.58
TRAF3IP2-AS1-204ENST00000440395 FAM69CQ0P6D2 419 aa11.4□□□□□ -0.58
TRAF3IP2-AS1-204ENST00000440395 EEA1Q15075 1411 aa11.39□□□□□ -0.59
TRAF3IP2-AS1-204ENST00000440395 CLASP1Q7Z460 1538 aa11.39□□□□□ -0.59
TRAF3IP2-AS1-204ENST00000440395 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
TRAF3IP2-AS1-204ENST00000440395 KDM4FA0A1W2PPD8 638 aa11.37□□□□□ -0.59
TRAF3IP2-AS1-204ENST00000440395 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
TRAF3IP2-AS1-204ENST00000440395 SYNJ2O15056 1496 aa11.34□□□□□ -0.59
TRAF3IP2-AS1-204ENST00000440395 GRIN2BQ13224 1484 aa11.34□□□□□ -0.59
TRAF3IP2-AS1-204ENST00000440395 PPP4R3CPQ6ZMV5 832 aa11.34□□□□□ -0.59
TRAF3IP2-AS1-204ENST00000440395 TOP2BQ02880 1626 aa11.33□□□□□ -0.6
TRAF3IP2-AS1-204ENST00000440395 BIVM-ERCC5R4GMW8 1640 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms