RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 MYT1Q01538 1121 aa11.77□□□□□ -0.53
A1CF-206ENST00000395489 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
A1CF-206ENST00000395489 TTBK1Q5TCY1 1321 aaPredicted RBP11.1□□□□□ -0.63
A1CF-206ENST00000395489 ERICH6Q7L0X2 663 aa10.51□□□□□ -0.73
A1CF-206ENST00000395489 CENPBP07199 599 aaPredicted RBP10.31□□□□□ -0.76
A1CF-206ENST00000395489 ZEB1P37275 1124 aaPredicted RBP10.3□□□□□ -0.76
A1CF-206ENST00000395489 CCER1Q8TC90 406 aaPredicted RBP10.26□□□□□ -0.77
A1CF-206ENST00000395489 YTHDC1Q96MU7 727 aaKnown RBP10.24□□□□□ -0.77
A1CF-206ENST00000395489 MYT1LQ9UL68 1186 aa9.98□□□□□ -0.81
A1CF-206ENST00000395489 CLSPNQ9HAW4 1339 aa9.93□□□□□ -0.82
A1CF-206ENST00000395489 HRCP23327 699 aa9.86□□□□□ -0.83
A1CF-206ENST00000395489 GLIPR1L2Q4G1C9 344 aa9.8□□□□□ -0.84
A1CF-206ENST00000395489 RANGAP1P46060 587 aaPredicted RBP9.71□□□□□ -0.85
A1CF-206ENST00000395489 NEFLP07196 543 aa9.69□□□□□ -0.86
A1CF-206ENST00000395489 PCGF6Q9BYE7 350 aa9.58□□□□□ -0.88
A1CF-206ENST00000395489 NISCHQ9Y2I1 1504 aa9.58□□□□□ -0.88
A1CF-206ENST00000395489 SLC24A1O60721 1099 aa9.57□□□□□ -0.88
A1CF-206ENST00000395489 RTL5Q5HYW3 569 aaPredicted RBP9.57□□□□□ -0.88
A1CF-206ENST00000395489 TRIM26Q12899 539 aaPredicted RBP9.48□□□□□ -0.89
A1CF-206ENST00000395489 EHMT2Q96KQ7 1210 aa9.39□□□□□ -0.91
A1CF-206ENST00000395489 ACIN1Q9UKV3 1341 aaKnown RBP9.39□□□□□ -0.91
A1CF-206ENST00000395489 DAXXQ9UER7 740 aaPredicted RBP9.36□□□□□ -0.91
A1CF-206ENST00000395489 FAM9AQ8IZU1 332 aaPredicted RBP9.35□□□□□ -0.91
A1CF-206ENST00000395489 ERICH6BQ5W0A0 696 aa9.33□□□□□ -0.92
A1CF-206ENST00000395489 NCLP19338 710 aaKnown RBP9.3□□□□□ -0.92
A1CF-206ENST00000395489 CCDC180Q9P1Z9 1646 aa9.29□□□□□ -0.92
A1CF-206ENST00000395489 BCL11AQ9H165 835 aa9.29□□□□□ -0.92
A1CF-206ENST00000395489 ANP32EQ9BTT0 268 aa9.28□□□□□ -0.92
A1CF-206ENST00000395489 GTF3C3Q9Y5Q9 886 aa9.28□□□□□ -0.92
A1CF-206ENST00000395489 EIF5BO60841 1220 aaKnown RBP9.27□□□□□ -0.93
A1CF-206ENST00000395489 DCAF1Q9Y4B6 1507 aa9.26□□□□□ -0.93
A1CF-206ENST00000395489 APLP2Q06481 763 aa9.24□□□□□ -0.93
A1CF-206ENST00000395489 DIEXFQ68CQ4 756 aaKnown RBP9.24□□□□□ -0.93
A1CF-206ENST00000395489 ZNF316A6NFI3 1004 aaPredicted RBP9.22□□□□□ -0.93
A1CF-206ENST00000395489 SUPT5HO00267 1087 aaKnown RBP9.19□□□□□ -0.94
A1CF-206ENST00000395489 ZNF326Q5BKZ1 582 aaKnown RBP9.19□□□□□ -0.94
A1CF-206ENST00000395489 CDK11AQ9UQ88 783 aaPredicted RBP9.17□□□□□ -0.94
A1CF-206ENST00000395489 DCAF8L2P0C7V8 631 aa9.14□□□□□ -0.95
A1CF-206ENST00000395489 TNNT2P45379 298 aaPredicted RBP9.13□□□□□ -0.95
A1CF-206ENST00000395489 ANP32AP39687 249 aaKnown RBP9.13□□□□□ -0.95
A1CF-206ENST00000395489 SCAF1Q9H7N4 1312 aaKnown RBP9.1□□□□□ -0.95
A1CF-206ENST00000395489 TRIM44Q96DX7 344 aaPredicted RBP9.08□□□□□ -0.96
A1CF-206ENST00000395489 ARID4BQ4LE39 1312 aaPredicted RBP9.06□□□□□ -0.96
A1CF-206ENST00000395489 ANP32BQ92688 251 aaKnown RBP9.02□□□□□ -0.97
A1CF-206ENST00000395489 PRKCSHP14314 528 aaPredicted RBP8.99□□□□□ -0.97
A1CF-206ENST00000395489 POLR3GLQ9BT43 218 aa8.99□□□□□ -0.97
A1CF-206ENST00000395489 PTMSP20962 102 aa8.98□□□□□ -0.97
A1CF-206ENST00000395489 RSPH6AQ9H0K4 717 aa8.96□□□□□ -0.98
A1CF-206ENST00000395489 CDK11BP21127 795 aaKnown RBP8.91□□□□□ -0.98
A1CF-206ENST00000395489 PPARGC1BQ86YN6 1023 aaKnown RBP8.91□□□□□ -0.98
A1CF-206ENST00000395489 PPM1GO15355 546 aaPredicted RBP8.87□□□□□ -0.99
A1CF-206ENST00000395489 NEUROD1Q13562 356 aa8.87□□□□□ -0.99
A1CF-206ENST00000395489 USP35Q9P2H5 1018 aa8.86□□□□□ -0.99
A1CF-206ENST00000395489 DDRGK1Q96HY6 314 aa8.85□□□□□ -0.99
A1CF-206ENST00000395489 LAS1LQ9Y4W2 734 aaKnown RBP8.85□□□□□ -0.99
A1CF-206ENST00000395489 ZBTB47Q9UFB7 747 aaPredicted RBP8.84□□□□□ -0.99
A1CF-206ENST00000395489 HMGB1P09429 215 aaKnown RBP8.83□□□□□ -1
A1CF-206ENST00000395489 TRIM41Q8WV44 630 aa8.81□□□□□ -1
A1CF-206ENST00000395489 CNGB1Q14028 1251 aaPredicted RBP8.8□□□□□ -1
A1CF-206ENST00000395489 PKNOX2Q96KN3 472 aa8.8□□□□□ -1
A1CF-206ENST00000395489 NEFMP07197 916 aa8.79□□□□□ -1
A1CF-206ENST00000395489 UBE2Q2Q8WVN8 375 aa8.77□□□□□ -1.01
A1CF-206ENST00000395489 ANP32CO43423 234 aa8.76□□□□□ -1.01
A1CF-206ENST00000395489 L1TD1Q5T7N2 865 aaKnown RBP8.76□□□□□ -1.01
A1CF-206ENST00000395489 CHIC1Q5VXU3 224 aa8.76□□□□□ -1.01
A1CF-206ENST00000395489 PODXL2Q9NZ53 605 aa8.76□□□□□ -1.01
A1CF-206ENST00000395489 SHROOM4Q9ULL8 1493 aa8.75□□□□□ -1.01
A1CF-206ENST00000395489 HSP90AA1P07900 732 aaKnown RBP8.75□□□□□ -1.01
A1CF-206ENST00000395489 MTERF4Q7Z6M4 381 aaKnown RBP8.74□□□□□ -1.01
A1CF-206ENST00000395489 UPF2Q9HAU5 1272 aaKnown RBP8.73□□□□□ -1.01
A1CF-206ENST00000395489 NOP58Q9Y2X3 529 aaKnown RBP8.73□□□□□ -1.01
A1CF-206ENST00000395489 ARXQ96QS3 562 aa8.73□□□□□ -1.01
A1CF-206ENST00000395489 DEKP35659 375 aaKnown RBP8.72□□□□□ -1.01
A1CF-206ENST00000395489 CALRP27797 417 aaKnown RBP8.72□□□□□ -1.01
A1CF-206ENST00000395489 MAP7D2Q96T17 732 aa8.7□□□□□ -1.02
A1CF-206ENST00000395489 TAF3Q5VWG9 929 aa8.69□□□□□ -1.02
A1CF-206ENST00000395489 BECN1Q14457 450 aa8.69□□□□□ -1.02
A1CF-206ENST00000395489 HSP90AA2PQ14568 343 aaPredicted RBP8.69□□□□□ -1.02
A1CF-206ENST00000395489 FANCIQ9NVI1 1328 aa8.68□□□□□ -1.02
A1CF-206ENST00000395489 A0A0U1RQG5 324 aaPredicted RBP8.66□□□□□ -1.02
A1CF-206ENST00000395489 CSRNP3Q8WYN3 585 aa8.65□□□□□ -1.02
A1CF-206ENST00000395489 FKBP8Q14318 412 aa8.64□□□□□ -1.03
A1CF-206ENST00000395489 NAP1L5Q96NT1 182 aaPredicted RBP8.64□□□□□ -1.03
A1CF-206ENST00000395489 CCDC136Q96JN2 1154 aa8.63□□□□□ -1.03
A1CF-206ENST00000395489 PNNQ9H307 717 aaKnown RBP8.62□□□□□ -1.03
A1CF-206ENST00000395489 NBR1Q14596 966 aa8.62□□□□□ -1.03
A1CF-206ENST00000395489 RRP9O43818 475 aaKnown RBP8.61□□□□□ -1.03
A1CF-206ENST00000395489 SUPT16HQ9Y5B9 1047 aaKnown RBP8.61□□□□□ -1.03
A1CF-206ENST00000395489 GOLGA6L22H0YM25 854 aa8.61□□□□□ -1.03
A1CF-206ENST00000395489 HOMEZQ8IX15 550 aa8.61□□□□□ -1.03
A1CF-206ENST00000395489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.6□□□□□ -1.03
A1CF-206ENST00000395489 CHAF1AQ13111 956 aaPredicted RBP8.59□□□□□ -1.03
A1CF-206ENST00000395489 GOLGA6L3A6NEY3 463 aa8.59□□□□□ -1.03
A1CF-206ENST00000395489 BCANQ96GW7 911 aa8.57□□□□□ -1.04
A1CF-206ENST00000395489 RBM19Q9Y4C8 960 aaKnown RBP8.56□□□□□ -1.04
A1CF-206ENST00000395489 EEA1Q15075 1411 aa8.55□□□□□ -1.04
A1CF-206ENST00000395489 NCBP3Q53F19 620 aaKnown RBP8.55□□□□□ -1.04
A1CF-206ENST00000395489 PPP4R2Q9NY27 417 aa8.54□□□□□ -1.04
A1CF-206ENST00000395489 TAF7LQ5H9L4 462 aa8.54□□□□□ -1.04
A1CF-206ENST00000395489 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms