RNA–Protein interactions for RNA: ENST00000338008.9

ZFYVE16-201, Transcript of zinc finger FYVE-type containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFYVE16, Length 6,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-201ENST00000338008 NISCHQ9Y2I1 1504 aa9.91□□□□□ -0.82
ZFYVE16-201ENST00000338008 CCDC180Q9P1Z9 1646 aa8.6□□□□□ -1.03
ZFYVE16-201ENST00000338008 ZCCHC6Q5VYS8 1495 aaKnown RBP8.42□□□□□ -1.06
ZFYVE16-201ENST00000338008 DCAF1Q9Y4B6 1507 aa8.36□□□□□ -1.07
ZFYVE16-201ENST00000338008 MYO15BQ96JP2 1530 aa8.26□□□□□ -1.09
ZFYVE16-201ENST00000338008 NACADO15069 1562 aa7.88□□□□□ -1.15
ZFYVE16-201ENST00000338008 ABCC9O60706 1549 aa7.85□□□□□ -1.15
ZFYVE16-201ENST00000338008 BICRAQ9NZM4 1560 aa7.84□□□□□ -1.15
ZFYVE16-201ENST00000338008 UNC13AQ9UPW8 1703 aa7.84□□□□□ -1.15
ZFYVE16-201ENST00000338008 EIF4G1Q04637 1599 aaKnown RBP7.75□□□□□ -1.17
ZFYVE16-201ENST00000338008 RSF1Q96T23 1441 aaPredicted RBP7.72□□□□□ -1.17
ZFYVE16-201ENST00000338008 CECR2Q9BXF3 1484 aa7.71□□□□□ -1.17
ZFYVE16-201ENST00000338008 PEG3Q9GZU2 1588 aa7.7□□□□□ -1.18
ZFYVE16-201ENST00000338008 RB1CC1Q8TDY2 1594 aa7.67□□□□□ -1.18
ZFYVE16-201ENST00000338008 MROH2BQ7Z745 1585 aa7.67□□□□□ -1.18
ZFYVE16-201ENST00000338008 SCRIBQ14160 1630 aa7.66□□□□□ -1.18
ZFYVE16-201ENST00000338008 SHROOM4Q9ULL8 1493 aa7.62□□□□□ -1.19
ZFYVE16-201ENST00000338008 SMARCA4P51532 1647 aa7.55□□□□□ -1.2
ZFYVE16-201ENST00000338008 BAZ1AQ9NRL2 1556 aaPredicted RBP7.55□□□□□ -1.2
ZFYVE16-201ENST00000338008 WIZO95785 1651 aa7.53□□□□□ -1.2
ZFYVE16-201ENST00000338008 SLC24A1O60721 1099 aa7.49□□□□□ -1.21
ZFYVE16-201ENST00000338008 SMARCA2P51531 1590 aa7.46□□□□□ -1.21
ZFYVE16-201ENST00000338008 TOP2AP11388 1531 aaKnown RBP7.45□□□□□ -1.22
ZFYVE16-201ENST00000338008 CHIC1Q5VXU3 224 aa7.42□□□□□ -1.22
ZFYVE16-201ENST00000338008 ATAD2BQ9ULI0 1458 aa7.41□□□□□ -1.22
ZFYVE16-201ENST00000338008 NCAPD3P42695 1498 aa7.39□□□□□ -1.23
ZFYVE16-201ENST00000338008 HMGXB3Q12766 1538 aa7.37□□□□□ -1.23
ZFYVE16-201ENST00000338008 CCDC88BA6NC98 1476 aa7.37□□□□□ -1.23
ZFYVE16-201ENST00000338008 SUPT5HO00267 1087 aaKnown RBP7.28□□□□□ -1.24
ZFYVE16-201ENST00000338008 DCAF8L2P0C7V8 631 aa7.28□□□□□ -1.24
ZFYVE16-201ENST00000338008 CFTRP13569 1480 aa7.24□□□□□ -1.25
ZFYVE16-201ENST00000338008 SYNJ1O43426 1573 aa7.23□□□□□ -1.25
ZFYVE16-201ENST00000338008 MYT1Q01538 1121 aa7.23□□□□□ -1.25
ZFYVE16-201ENST00000338008 BIVM-ERCC5R4GMW8 1640 aa7.2□□□□□ -1.26
ZFYVE16-201ENST00000338008 ABCC8Q09428 1581 aa7.19□□□□□ -1.26
ZFYVE16-201ENST00000338008 PABPN1Q86U42 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
ZFYVE16-201ENST00000338008 TOP2BQ02880 1626 aa7.17□□□□□ -1.26
ZFYVE16-201ENST00000338008 DNAJC5BQ9UF47 199 aa7.16□□□□□ -1.26
ZFYVE16-201ENST00000338008 RUSC2Q8N2Y8 1516 aa7.16□□□□□ -1.26
ZFYVE16-201ENST00000338008 PRDM2Q13029 1718 aa7.16□□□□□ -1.26
ZFYVE16-201ENST00000338008 CC2D2AQ9P2K1 1620 aa7.15□□□□□ -1.26
ZFYVE16-201ENST00000338008 BAZ1BQ9UIG0 1483 aaKnown RBP7.14□□□□□ -1.27
ZFYVE16-201ENST00000338008 CUX1P39880 1505 aa7.13□□□□□ -1.27
ZFYVE16-201ENST00000338008 PELP1Q8IZL8 1130 aaKnown RBP7.13□□□□□ -1.27
ZFYVE16-201ENST00000338008 PRXQ9BXM0 1461 aa7.1□□□□□ -1.27
ZFYVE16-201ENST00000338008 SOGA1O94964 1423 aa7.1□□□□□ -1.27
ZFYVE16-201ENST00000338008 WDR97A6NE52 1622 aa7.08□□□□□ -1.28
ZFYVE16-201ENST00000338008 TTBK1Q5TCY1 1321 aaPredicted RBP7.07□□□□□ -1.28
ZFYVE16-201ENST00000338008 WRNQ14191 1432 aaPredicted RBP eCLIP7.06□□□□□ -1.28
ZFYVE16-201ENST00000338008 KIF21BO75037 1637 aa7.05□□□□□ -1.28
ZFYVE16-201ENST00000338008 CADPSQ9ULU8 1353 aa7.04□□□□□ -1.28
ZFYVE16-201ENST00000338008 EEA1Q15075 1411 aa7□□□□□ -1.29
ZFYVE16-201ENST00000338008 TARBP1Q13395 1621 aaKnown RBP7□□□□□ -1.29
ZFYVE16-201ENST00000338008 NESP48681 1621 aa6.99□□□□□ -1.29
ZFYVE16-201ENST00000338008 LOC105371045A0A1W2PR82 267 aa6.99□□□□□ -1.29
ZFYVE16-201ENST00000338008 URB2Q14146 1524 aaKnown RBP6.99□□□□□ -1.29
ZFYVE16-201ENST00000338008 LAMC3Q9Y6N6 1575 aa6.99□□□□□ -1.29
ZFYVE16-201ENST00000338008 ERICH3Q5RHP9 1530 aa6.99□□□□□ -1.29
ZFYVE16-201ENST00000338008 CUX2O14529 1486 aa6.98□□□□□ -1.29
ZFYVE16-201ENST00000338008 ABCA5Q8WWZ7 1642 aa6.97□□□□□ -1.29
ZFYVE16-201ENST00000338008 ABCA10Q8WWZ4 1543 aa6.97□□□□□ -1.29
ZFYVE16-201ENST00000338008 POLA1P09884 1462 aaPredicted RBP6.95□□□□□ -1.3
ZFYVE16-201ENST00000338008 RAPGEF2Q9Y4G8 1499 aa6.95□□□□□ -1.3
ZFYVE16-201ENST00000338008 TOPBP1Q92547 1522 aa6.95□□□□□ -1.3
ZFYVE16-201ENST00000338008 TNIKQ9UKE5 1360 aa6.94□□□□□ -1.3
ZFYVE16-201ENST00000338008 DNMBPQ6XZF7 1577 aa6.94□□□□□ -1.3
ZFYVE16-201ENST00000338008 IGF1RP08069 1367 aa6.94□□□□□ -1.3
ZFYVE16-201ENST00000338008 DAXXQ9UER7 740 aaPredicted RBP6.92□□□□□ -1.3
ZFYVE16-201ENST00000338008 PRKCSHP14314 528 aaPredicted RBP6.91□□□□□ -1.3
ZFYVE16-201ENST00000338008 ERICH6Q7L0X2 663 aa6.91□□□□□ -1.3
ZFYVE16-201ENST00000338008 FANCD2Q9BXW9 1451 aa6.91□□□□□ -1.3
ZFYVE16-201ENST00000338008 FGD5Q6ZNL6 1462 aa6.9□□□□□ -1.3
ZFYVE16-201ENST00000338008 KIF21AQ7Z4S6 1674 aa6.9□□□□□ -1.3
ZFYVE16-201ENST00000338008 THOC2Q8NI27 1593 aaKnown RBP6.9□□□□□ -1.31
ZFYVE16-201ENST00000338008 ARAP1Q96P48 1450 aa6.89□□□□□ -1.31
ZFYVE16-201ENST00000338008 WDR62O43379 1518 aa6.88□□□□□ -1.31
ZFYVE16-201ENST00000338008 CEP164Q9UPV0 1460 aa6.86□□□□□ -1.31
ZFYVE16-201ENST00000338008 CEP162Q5TB80 1403 aa6.86□□□□□ -1.31
ZFYVE16-201ENST00000338008 TRIM41Q8WV44 630 aa6.86□□□□□ -1.31
ZFYVE16-201ENST00000338008 CSRNP3Q8WYN3 585 aa6.85□□□□□ -1.31
ZFYVE16-201ENST00000338008 SAMD9Q5K651 1589 aa6.85□□□□□ -1.31
ZFYVE16-201ENST00000338008 LRRIQ1Q96JM4 1722 aa6.85□□□□□ -1.31
ZFYVE16-201ENST00000338008 ARHGAP35Q9NRY4 1499 aa6.85□□□□□ -1.31
ZFYVE16-201ENST00000338008 CLIP1P30622 1438 aa6.84□□□□□ -1.32
ZFYVE16-201ENST00000338008 GOLGA3Q08378 1498 aa6.84□□□□□ -1.32
ZFYVE16-201ENST00000338008 RAD54L2Q9Y4B4 1467 aa6.83□□□□□ -1.32
ZFYVE16-201ENST00000338008 MAP3K1Q13233 1512 aa6.82□□□□□ -1.32
ZFYVE16-201ENST00000338008 APLP2Q06481 763 aa6.82□□□□□ -1.32
ZFYVE16-201ENST00000338008 SNAPC4Q5SXM2 1469 aa6.81□□□□□ -1.32
ZFYVE16-201ENST00000338008 ARHGEF11O15085 1522 aa6.8□□□□□ -1.32
ZFYVE16-201ENST00000338008 VPS8Q8N3P4 1428 aa6.8□□□□□ -1.32
ZFYVE16-201ENST00000338008 ZNF608Q9ULD9 1512 aaPredicted RBP6.78□□□□□ -1.32
ZFYVE16-201ENST00000338008 CUL7Q14999 1698 aa6.77□□□□□ -1.32
ZFYVE16-201ENST00000338008 KIF27Q86VH2 1401 aa6.77□□□□□ -1.33
ZFYVE16-201ENST00000338008 ADAMTS12P58397 1594 aa6.76□□□□□ -1.33
ZFYVE16-201ENST00000338008 AQRO60306 1485 aaKnown RBP eCLIP6.74□□□□□ -1.33
ZFYVE16-201ENST00000338008 MAGI3Q5TCQ9 1506 aa6.74□□□□□ -1.33
ZFYVE16-201ENST00000338008 PDS5BQ9NTI5 1447 aa6.73□□□□□ -1.33
ZFYVE16-201ENST00000338008 DISP1Q96F81 1524 aa6.73□□□□□ -1.33
ZFYVE16-201ENST00000338008 MRC2Q9UBG0 1479 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms