RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 NISCHQ9Y2I1 1504 aa27.28■■□□□ 1.96
UBQLN1-202ENST00000376395 DCAF8L2P0C7V8 631 aa25.56■■□□□ 1.68
UBQLN1-202ENST00000376395 SHROOM4Q9ULL8 1493 aa25.52■■□□□ 1.68
UBQLN1-202ENST00000376395 SUPT5HO00267 1087 aaKnown RBP25.51■■□□□ 1.67
UBQLN1-202ENST00000376395 PCGF6Q9BYE7 350 aa24.37■■□□□ 1.49
UBQLN1-202ENST00000376395 EHMT2Q96KQ7 1210 aa24.28■■□□□ 1.48
UBQLN1-202ENST00000376395 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
UBQLN1-202ENST00000376395 CHIC1Q5VXU3 224 aa23.83■■□□□ 1.41
UBQLN1-202ENST00000376395 HRCP23327 699 aa23.76■■□□□ 1.39
UBQLN1-202ENST00000376395 PPARGC1BQ86YN6 1023 aaKnown RBP23.76■■□□□ 1.39
UBQLN1-202ENST00000376395 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
UBQLN1-202ENST00000376395 TTBK1Q5TCY1 1321 aaPredicted RBP23.47■■□□□ 1.35
UBQLN1-202ENST00000376395 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
UBQLN1-202ENST00000376395 TRIM26Q12899 539 aaPredicted RBP23.21■■□□□ 1.31
UBQLN1-202ENST00000376395 MYO15BQ96JP2 1530 aa23.11■■□□□ 1.29
UBQLN1-202ENST00000376395 CCER1Q8TC90 406 aaPredicted RBP22.98■■□□□ 1.27
UBQLN1-202ENST00000376395 ZEB1P37275 1124 aaPredicted RBP22.95■■□□□ 1.26
UBQLN1-202ENST00000376395 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
UBQLN1-202ENST00000376395 RANGAP1P46060 587 aaPredicted RBP22.82■■□□□ 1.24
UBQLN1-202ENST00000376395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.74■■□□□ 1.23
UBQLN1-202ENST00000376395 UBTFP17480 764 aaKnown RBP22.64■■□□□ 1.22
UBQLN1-202ENST00000376395 YTHDC1Q96MU7 727 aaKnown RBP22.64■■□□□ 1.21
UBQLN1-202ENST00000376395 APLP2Q06481 763 aa22.56■■□□□ 1.2
UBQLN1-202ENST00000376395 CENPBP07199 599 aaPredicted RBP22.5■■□□□ 1.19
UBQLN1-202ENST00000376395 DCAF1Q9Y4B6 1507 aa22.44■■□□□ 1.18
UBQLN1-202ENST00000376395 PELP1Q8IZL8 1130 aaKnown RBP22.37■■□□□ 1.17
UBQLN1-202ENST00000376395 HNRNPUL2Q1KMD3 747 aaKnown RBP22.34■■□□□ 1.17
UBQLN1-202ENST00000376395 DIEXFQ68CQ4 756 aaKnown RBP22.3■■□□□ 1.16
UBQLN1-202ENST00000376395 ABCC9O60706 1549 aa22.26■■□□□ 1.15
UBQLN1-202ENST00000376395 CCDC180Q9P1Z9 1646 aa22.2■■□□□ 1.14
UBQLN1-202ENST00000376395 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
UBQLN1-202ENST00000376395 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
UBQLN1-202ENST00000376395 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
UBQLN1-202ENST00000376395 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
UBQLN1-202ENST00000376395 ITGAEP38570 1179 aa22.02■■□□□ 1.12
UBQLN1-202ENST00000376395 ACIN1Q9UKV3 1341 aaKnown RBP22.01■■□□□ 1.11
UBQLN1-202ENST00000376395 NEUROD1Q13562 356 aa22.01■■□□□ 1.11
UBQLN1-202ENST00000376395 PABPN1Q86U42 306 aaKnown RBP eCLIP22■■□□□ 1.11
UBQLN1-202ENST00000376395 ATP1B4Q9UN42 357 aaPredicted RBP21.97■■□□□ 1.11
UBQLN1-202ENST00000376395 ZNF316A6NFI3 1004 aaPredicted RBP21.81■■□□□ 1.08
UBQLN1-202ENST00000376395 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
UBQLN1-202ENST00000376395 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
UBQLN1-202ENST00000376395 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
UBQLN1-202ENST00000376395 MIER1Q8N108 512 aa21.58■■□□□ 1.05
UBQLN1-202ENST00000376395 BCANQ96GW7 911 aa21.51■■□□□ 1.03
UBQLN1-202ENST00000376395 MYT1Q01538 1121 aa21.49■■□□□ 1.03
UBQLN1-202ENST00000376395 NEFLP07196 543 aa21.48■■□□□ 1.03
UBQLN1-202ENST00000376395 CEP162Q5TB80 1403 aa21.47■■□□□ 1.03
UBQLN1-202ENST00000376395 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
UBQLN1-202ENST00000376395 SOGA1O94964 1423 aa21.38■■□□□ 1.01
UBQLN1-202ENST00000376395 FAM50AQ14320 339 aaKnown RBP21.38■■□□□ 1.01
UBQLN1-202ENST00000376395 ERICH6Q7L0X2 663 aa21.34■■□□□ 1.01
UBQLN1-202ENST00000376395 CNGB1Q14028 1251 aaPredicted RBP21.34■■□□□ 1.01
UBQLN1-202ENST00000376395 ABCC8Q09428 1581 aa21.3■■□□□ 1
UBQLN1-202ENST00000376395 P3H3Q8IVL6 736 aa21.3■■□□□ 1
UBQLN1-202ENST00000376395 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
UBQLN1-202ENST00000376395 WIZO95785 1651 aa21.22■□□□□ 0.99
UBQLN1-202ENST00000376395 CLIP1P30622 1438 aa21.21■□□□□ 0.99
UBQLN1-202ENST00000376395 TNIKQ9UKE5 1360 aa21.2■□□□□ 0.98
UBQLN1-202ENST00000376395 HIRIP3Q9BW71 556 aaPredicted RBP21.18■□□□□ 0.98
UBQLN1-202ENST00000376395 DDX10Q13206 875 aaKnown RBP21.13■□□□□ 0.97
UBQLN1-202ENST00000376395 POLR3GLQ9BT43 218 aa21.11■□□□□ 0.97
UBQLN1-202ENST00000376395 RUSC2Q8N2Y8 1516 aa21.09■□□□□ 0.97
UBQLN1-202ENST00000376395 GOLGA3Q08378 1498 aa21.09■□□□□ 0.97
UBQLN1-202ENST00000376395 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
UBQLN1-202ENST00000376395 NACADO15069 1562 aa21.07■□□□□ 0.96
UBQLN1-202ENST00000376395 FKBP8Q14318 412 aa21.03■□□□□ 0.96
UBQLN1-202ENST00000376395 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.96
UBQLN1-202ENST00000376395 TRIM52Q96A61 297 aa21.01■□□□□ 0.95
UBQLN1-202ENST00000376395 EEA1Q15075 1411 aa20.96■□□□□ 0.95
UBQLN1-202ENST00000376395 ARID3CA6NKF2 412 aa20.96■□□□□ 0.95
UBQLN1-202ENST00000376395 ANP32CO43423 234 aa20.95■□□□□ 0.94
UBQLN1-202ENST00000376395 KANK4Q5T7N3 995 aaPredicted RBP20.93■□□□□ 0.94
UBQLN1-202ENST00000376395 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
UBQLN1-202ENST00000376395 SIN3AQ96ST3 1273 aa20.87■□□□□ 0.93
UBQLN1-202ENST00000376395 SUPT16HQ9Y5B9 1047 aaKnown RBP20.85■□□□□ 0.93
UBQLN1-202ENST00000376395 IRX6P78412 446 aaPredicted RBP20.81■□□□□ 0.92
UBQLN1-202ENST00000376395 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
UBQLN1-202ENST00000376395 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
UBQLN1-202ENST00000376395 ZNF326Q5BKZ1 582 aaKnown RBP20.74■□□□□ 0.91
UBQLN1-202ENST00000376395 HNRNPUQ00839 825 aaKnown RBP eCLIP20.73■□□□□ 0.91
UBQLN1-202ENST00000376395 CHIC2Q9UKJ5 165 aa20.72■□□□□ 0.91
UBQLN1-202ENST00000376395 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
UBQLN1-202ENST00000376395 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
UBQLN1-202ENST00000376395 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
UBQLN1-202ENST00000376395 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
UBQLN1-202ENST00000376395 SENP3-EIF4A1A0A087X0R7 540 aa20.67■□□□□ 0.9
UBQLN1-202ENST00000376395 FAM9BQ8IZU0 186 aa20.62■□□□□ 0.89
UBQLN1-202ENST00000376395 CDK11AQ9UQ88 783 aaPredicted RBP20.62■□□□□ 0.89
UBQLN1-202ENST00000376395 CLSPNQ9HAW4 1339 aa20.61■□□□□ 0.89
UBQLN1-202ENST00000376395 CCNB3Q8WWL7 1395 aa20.6■□□□□ 0.89
UBQLN1-202ENST00000376395 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
UBQLN1-202ENST00000376395 DHX57Q6P158 1386 aaKnown RBP20.56■□□□□ 0.88
UBQLN1-202ENST00000376395 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
UBQLN1-202ENST00000376395 RRP7BPQ9NSQ0 103 aa20.55■□□□□ 0.88
UBQLN1-202ENST00000376395 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
UBQLN1-202ENST00000376395 TSHZ2Q9NRE2 1034 aa20.51■□□□□ 0.87
UBQLN1-202ENST00000376395 RAB3GAP2Q9H2M9 1393 aa20.49■□□□□ 0.87
UBQLN1-202ENST00000376395 ANP32EQ9BTT0 268 aa20.46■□□□□ 0.87
UBQLN1-202ENST00000376395 MTUS2Q5JR59 1369 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms