RNA–Protein interactions for RNA: ENST00000621674.4

RPL13A-213, Transcript of ribosomal protein L13a, humanhuman

TSL 5 BASIC

Gene RPL13A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-213ENST00000621674 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
RPL13A-213ENST00000621674 CCDC180Q9P1Z9 1646 aa30.07■■■□□ 2.4
RPL13A-213ENST00000621674 ABCC9O60706 1549 aa29.68■■■□□ 2.34
RPL13A-213ENST00000621674 RB1CC1Q8TDY2 1594 aa28.41■■■□□ 2.14
RPL13A-213ENST00000621674 DCAF8L2P0C7V8 631 aa28.37■■■□□ 2.13
RPL13A-213ENST00000621674 NACADO15069 1562 aa28.35■■■□□ 2.13
RPL13A-213ENST00000621674 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
RPL13A-213ENST00000621674 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
RPL13A-213ENST00000621674 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
RPL13A-213ENST00000621674 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.044e-6■□□□□ 9.3
RPL13A-213ENST00000621674 UNC13AQ9UPW8 1703 aa27.77■■■□□ 2.04
RPL13A-213ENST00000621674 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
RPL13A-213ENST00000621674 DNAJC5BQ9UF47 199 aa27.5■■□□□ 1.99
RPL13A-213ENST00000621674 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
RPL13A-213ENST00000621674 SHROOM4Q9ULL8 1493 aa27.23■■□□□ 1.95
RPL13A-213ENST00000621674 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
RPL13A-213ENST00000621674 CC2D2AQ9P2K1 1620 aa26.81■■□□□ 1.88
RPL13A-213ENST00000621674 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
RPL13A-213ENST00000621674 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
RPL13A-213ENST00000621674 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
RPL13A-213ENST00000621674 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
RPL13A-213ENST00000621674 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.78
RPL13A-213ENST00000621674 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
RPL13A-213ENST00000621674 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
RPL13A-213ENST00000621674 HMGXB3Q12766 1538 aa26.01■■□□□ 1.75
RPL13A-213ENST00000621674 PEG3Q9GZU2 1588 aa26.01■■□□□ 1.75
RPL13A-213ENST00000621674 BAZ1BQ9UIG0 1483 aaKnown RBP25.94■■□□□ 1.74
RPL13A-213ENST00000621674 WIZO95785 1651 aa25.78■■□□□ 1.72
RPL13A-213ENST00000621674 RSF1Q96T23 1441 aaPredicted RBP25.76■■□□□ 1.71
RPL13A-213ENST00000621674 NESP48681 1621 aa25.66■■□□□ 1.7
RPL13A-213ENST00000621674 ERCC6Q03468 1493 aa25.54■■□□□ 1.68
RPL13A-213ENST00000621674 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
RPL13A-213ENST00000621674 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
RPL13A-213ENST00000621674 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
RPL13A-213ENST00000621674 PDS5BQ9NTI5 1447 aa25.34■■□□□ 1.65
RPL13A-213ENST00000621674 CUX2O14529 1486 aa25.33■■□□□ 1.65
RPL13A-213ENST00000621674 KIF21AQ7Z4S6 1674 aa25.28■■□□□ 1.64
RPL13A-213ENST00000621674 CFTRP13569 1480 aa25.25■■□□□ 1.63
RPL13A-213ENST00000621674 THOC2Q8NI27 1593 aaKnown RBP25.24■■□□□ 1.63
RPL13A-213ENST00000621674 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
RPL13A-213ENST00000621674 FANCD2Q9BXW9 1451 aa25.14■■□□□ 1.61
RPL13A-213ENST00000621674 MRC2Q9UBG0 1479 aa25.1■■□□□ 1.61
RPL13A-213ENST00000621674 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
RPL13A-213ENST00000621674 WDR62O43379 1518 aa25.02■■□□□ 1.6
RPL13A-213ENST00000621674 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
RPL13A-213ENST00000621674 PRDM2Q13029 1718 aa24.93■■□□□ 1.58
RPL13A-213ENST00000621674 URB2Q14146 1524 aaKnown RBP24.91■■□□□ 1.58
RPL13A-213ENST00000621674 DNAJC5Q9H3Z4 198 aa24.83■■□□□ 1.57
RPL13A-213ENST00000621674 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
RPL13A-213ENST00000621674 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
RPL13A-213ENST00000621674 DNMBPQ6XZF7 1577 aa24.64■■□□□ 1.54
RPL13A-213ENST00000621674 IFT140Q96RY7 1462 aa24.58■■□□□ 1.52
RPL13A-213ENST00000621674 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
RPL13A-213ENST00000621674 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
RPL13A-213ENST00000621674 CUX1P39880 1505 aa24.49■■□□□ 1.51
RPL13A-213ENST00000621674 TARBP1Q13395 1621 aaKnown RBP24.45■■□□□ 1.5
RPL13A-213ENST00000621674 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
RPL13A-213ENST00000621674 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
RPL13A-213ENST00000621674 SOGA1O94964 1423 aa24.4■■□□□ 1.5
RPL13A-213ENST00000621674 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.495e-18■■■■■ 39.2
RPL13A-213ENST00000621674 EIF4G3O43432 1585 aaKnown RBP24.36■■□□□ 1.49
RPL13A-213ENST00000621674 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
RPL13A-213ENST00000621674 OSCARQ8IYS5 282 aa24.3■■□□□ 1.48
RPL13A-213ENST00000621674 WRNQ14191 1432 aaPredicted RBP eCLIP24.25■■□□□ 1.47
RPL13A-213ENST00000621674 SYNJ1O43426 1573 aa24.2■■□□□ 1.47
RPL13A-213ENST00000621674 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
RPL13A-213ENST00000621674 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
RPL13A-213ENST00000621674 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
RPL13A-213ENST00000621674 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
RPL13A-213ENST00000621674 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
RPL13A-213ENST00000621674 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
RPL13A-213ENST00000621674 FBLN2P98095 1184 aa24.1■■□□□ 1.45
RPL13A-213ENST00000621674 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
RPL13A-213ENST00000621674 CHD1O14646 1710 aa24.07■■□□□ 1.44
RPL13A-213ENST00000621674 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
RPL13A-213ENST00000621674 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
RPL13A-213ENST00000621674 PBRM1Q86U86 1689 aa24■■□□□ 1.43
RPL13A-213ENST00000621674 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
RPL13A-213ENST00000621674 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
RPL13A-213ENST00000621674 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
RPL13A-213ENST00000621674 RIMBP3CA6NJZ7 1639 aa23.9■■□□□ 1.42
RPL13A-213ENST00000621674 RIMBP3BA6NNM3 1639 aa23.9■■□□□ 1.42
RPL13A-213ENST00000621674 RIMBP3Q9UFD9 1639 aa23.9■■□□□ 1.42
RPL13A-213ENST00000621674 ARHGEF11O15085 1522 aa23.89■■□□□ 1.41
RPL13A-213ENST00000621674 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
RPL13A-213ENST00000621674 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
RPL13A-213ENST00000621674 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
RPL13A-213ENST00000621674 FHAD1B1AJZ9 1412 aa23.82■■□□□ 1.4
RPL13A-213ENST00000621674 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
RPL13A-213ENST00000621674 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
RPL13A-213ENST00000621674 IGF1RP08069 1367 aa23.73■■□□□ 1.39
RPL13A-213ENST00000621674 NUP160Q12769 1436 aa23.73■■□□□ 1.39
RPL13A-213ENST00000621674 CYB5RLQ6IPT4 315 aa23.72■■□□□ 1.39
RPL13A-213ENST00000621674 CEP170Q5SW79 1584 aa23.7■■□□□ 1.38
RPL13A-213ENST00000621674 ARAP1Q96P48 1450 aa23.7■■□□□ 1.38
RPL13A-213ENST00000621674 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
RPL13A-213ENST00000621674 RUSC2Q8N2Y8 1516 aa23.56■■□□□ 1.36
RPL13A-213ENST00000621674 CUL7Q14999 1698 aa23.56■■□□□ 1.36
RPL13A-213ENST00000621674 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
RPL13A-213ENST00000621674 SHROOM2Q13796 1616 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms