Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
BEST4Q8NFU0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BEST4Q8NFU0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.57■□□□□ 0.4
BEST4Q8NFU0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.56■□□□□ 0.4
BEST4Q8NFU0 AL138724.1-201ENST00000606771 1088 ntBASIC17.56■□□□□ 0.4
BEST4Q8NFU0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.56■□□□□ 0.4
BEST4Q8NFU0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 AC120498.9-201ENST00000339021 3867 ntBASIC17.55■□□□□ 0.4
BEST4Q8NFU0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 AL158211.5-201ENST00000623583 2518 ntBASIC17.55■□□□□ 0.4
BEST4Q8NFU0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 LETM1P2-201ENST00000597330 2178 ntBASIC17.55■□□□□ 0.4
BEST4Q8NFU0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
BEST4Q8NFU0 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 NEFHP1-201ENST00000412845 2629 ntBASIC17.54■□□□□ 0.4
BEST4Q8NFU0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 SYT6-210ENST00000641643 1587 ntBASIC17.54■□□□□ 0.4
BEST4Q8NFU0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 SERBP1P1-201ENST00000396021 1160 ntBASIC17.54■□□□□ 0.4
BEST4Q8NFU0 SLC47A1P1-202ENST00000449666 945 ntBASIC17.54■□□□□ 0.4
BEST4Q8NFU0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.54■□□□□ 0.4
BEST4Q8NFU0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms