RNA–Protein interactions for RNA: ENST00000544802.5

GTF2IP4-202, Transcript of general transcription factor IIi pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP4, Length 3,609 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP4-202ENST00000544802 NISCHQ9Y2I1 1504 aa32.39■■■□□ 2.78
GTF2IP4-202ENST00000544802 SUPT5HO00267 1087 aaKnown RBP31.39■■■□□ 2.62
GTF2IP4-202ENST00000544802 SHROOM4Q9ULL8 1493 aa31.31■■■□□ 2.6
GTF2IP4-202ENST00000544802 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
GTF2IP4-202ENST00000544802 PCGF6Q9BYE7 350 aa30.51■■■□□ 2.47
GTF2IP4-202ENST00000544802 EHMT2Q96KQ7 1210 aa30.26■■■□□ 2.43
GTF2IP4-202ENST00000544802 PPARGC1BQ86YN6 1023 aaKnown RBP30.17■■■□□ 2.42
GTF2IP4-202ENST00000544802 HRCP23327 699 aa29.76■■■□□ 2.36
GTF2IP4-202ENST00000544802 LOC105371045A0A1W2PR82 267 aa29.49■■■□□ 2.31
GTF2IP4-202ENST00000544802 FAM9AQ8IZU1 332 aaPredicted RBP29.49■■■□□ 2.31
GTF2IP4-202ENST00000544802 CHIC1Q5VXU3 224 aa29.27■■■□□ 2.28
GTF2IP4-202ENST00000544802 TTBK1Q5TCY1 1321 aaPredicted RBP29.27■■■□□ 2.28
GTF2IP4-202ENST00000544802 MYO15BQ96JP2 1530 aa28.67■■■□□ 2.18
GTF2IP4-202ENST00000544802 TRIM26Q12899 539 aaPredicted RBP28.63■■■□□ 2.17
GTF2IP4-202ENST00000544802 YTHDC1Q96MU7 727 aaKnown RBP28.54■■■□□ 2.16
GTF2IP4-202ENST00000544802 TRIM41Q8WV44 630 aa28.48■■■□□ 2.15
GTF2IP4-202ENST00000544802 CCER1Q8TC90 406 aaPredicted RBP28.46■■■□□ 2.15
GTF2IP4-202ENST00000544802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.35■■■□□ 2.13
GTF2IP4-202ENST00000544802 PELP1Q8IZL8 1130 aaKnown RBP28.26■■■□□ 2.11
GTF2IP4-202ENST00000544802 SCAF1Q9H7N4 1312 aaKnown RBP28.23■■■□□ 2.11
GTF2IP4-202ENST00000544802 ZEB1P37275 1124 aaPredicted RBP28.2■■■□□ 2.11
GTF2IP4-202ENST00000544802 RANGAP1P46060 587 aaPredicted RBP28.12■■■□□ 2.09
GTF2IP4-202ENST00000544802 GTF3C3Q9Y5Q9 886 aa28.02■■■□□ 2.08
GTF2IP4-202ENST00000544802 CENPBP07199 599 aaPredicted RBP28■■■□□ 2.07
GTF2IP4-202ENST00000544802 NEUROD1Q13562 356 aa27.84■■■□□ 2.05
GTF2IP4-202ENST00000544802 DIEXFQ68CQ4 756 aaKnown RBP27.81■■■□□ 2.04
GTF2IP4-202ENST00000544802 ACIN1Q9UKV3 1341 aaKnown RBP27.67■■■□□ 2.02
GTF2IP4-202ENST00000544802 HNRNPUL2Q1KMD3 747 aaKnown RBP27.6■■■□□ 2.01
GTF2IP4-202ENST00000544802 UBTFP17480 764 aaKnown RBP27.59■■■□□ 2.01
GTF2IP4-202ENST00000544802 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
GTF2IP4-202ENST00000544802 APLP2Q06481 763 aa27.29■■□□□ 1.96
GTF2IP4-202ENST00000544802 ZCCHC6Q5VYS8 1495 aaKnown RBP27.17■■□□□ 1.94
GTF2IP4-202ENST00000544802 BCANQ96GW7 911 aa27.17■■□□□ 1.94
GTF2IP4-202ENST00000544802 ITGAEP38570 1179 aa27.15■■□□□ 1.94
GTF2IP4-202ENST00000544802 CCDC180Q9P1Z9 1646 aa27.11■■□□□ 1.93
GTF2IP4-202ENST00000544802 MIER1Q8N108 512 aa27.01■■□□□ 1.91
GTF2IP4-202ENST00000544802 ZNF316A6NFI3 1004 aaPredicted RBP26.99■■□□□ 1.91
GTF2IP4-202ENST00000544802 MYT1Q01538 1121 aa26.95■■□□□ 1.9
GTF2IP4-202ENST00000544802 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
GTF2IP4-202ENST00000544802 CNGB1Q14028 1251 aaPredicted RBP26.66■■□□□ 1.86
GTF2IP4-202ENST00000544802 ABCC9O60706 1549 aa26.56■■□□□ 1.84
GTF2IP4-202ENST00000544802 ERICH6Q7L0X2 663 aa26.53■■□□□ 1.84
GTF2IP4-202ENST00000544802 NEFLP07196 543 aa26.49■■□□□ 1.83
GTF2IP4-202ENST00000544802 SCRIBQ14160 1630 aa26.48■■□□□ 1.83
GTF2IP4-202ENST00000544802 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
GTF2IP4-202ENST00000544802 HIRIP3Q9BW71 556 aaPredicted RBP26.43■■□□□ 1.82
GTF2IP4-202ENST00000544802 CSRNP3Q8WYN3 585 aa26.35■■□□□ 1.81
GTF2IP4-202ENST00000544802 FKBP8Q14318 412 aa26.33■■□□□ 1.81
GTF2IP4-202ENST00000544802 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
GTF2IP4-202ENST00000544802 TRIM52Q96A61 297 aa26.26■■□□□ 1.79
GTF2IP4-202ENST00000544802 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.79
GTF2IP4-202ENST00000544802 DDX10Q13206 875 aaKnown RBP26.2■■□□□ 1.78
GTF2IP4-202ENST00000544802 IRX6P78412 446 aaPredicted RBP26.19■■□□□ 1.78
GTF2IP4-202ENST00000544802 SUPT16HQ9Y5B9 1047 aaKnown RBP26.18■■□□□ 1.78
GTF2IP4-202ENST00000544802 KCNH8Q96L42 1107 aa26.13■■□□□ 1.77
GTF2IP4-202ENST00000544802 CEP162Q5TB80 1403 aa26.1■■□□□ 1.77
GTF2IP4-202ENST00000544802 FAM50AQ14320 339 aaKnown RBP26.1■■□□□ 1.77
GTF2IP4-202ENST00000544802 CECR2Q9BXF3 1484 aa26.08■■□□□ 1.77
GTF2IP4-202ENST00000544802 POLR3GLQ9BT43 218 aa26.08■■□□□ 1.77
GTF2IP4-202ENST00000544802 SENP3-EIF4A1A0A087X0R7 540 aa26.05■■□□□ 1.76
GTF2IP4-202ENST00000544802 SOGA1O94964 1423 aa25.98■■□□□ 1.75
GTF2IP4-202ENST00000544802 P3H3Q8IVL6 736 aa25.98■■□□□ 1.75
GTF2IP4-202ENST00000544802 ANP32EQ9BTT0 268 aa25.93■■□□□ 1.74
GTF2IP4-202ENST00000544802 TSHZ2Q9NRE2 1034 aa25.92■■□□□ 1.74
GTF2IP4-202ENST00000544802 BCL11AQ9H165 835 aa25.89■■□□□ 1.74
GTF2IP4-202ENST00000544802 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
GTF2IP4-202ENST00000544802 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
GTF2IP4-202ENST00000544802 ANP32CO43423 234 aa25.76■■□□□ 1.71
GTF2IP4-202ENST00000544802 SIN3AQ96ST3 1273 aa25.75■■□□□ 1.71
GTF2IP4-202ENST00000544802 NBR1Q14596 966 aa25.72■■□□□ 1.71
GTF2IP4-202ENST00000544802 HNRNPUQ00839 825 aaKnown RBP eCLIP25.72■■□□□ 1.71
GTF2IP4-202ENST00000544802 RUSC2Q8N2Y8 1516 aa25.7■■□□□ 1.7
GTF2IP4-202ENST00000544802 CLIP1P30622 1438 aa25.68■■□□□ 1.7
GTF2IP4-202ENST00000544802 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
GTF2IP4-202ENST00000544802 CDK11AQ9UQ88 783 aaPredicted RBP25.64■■□□□ 1.7
GTF2IP4-202ENST00000544802 ARID3CA6NKF2 412 aa25.63■■□□□ 1.69
GTF2IP4-202ENST00000544802 KANK4Q5T7N3 995 aaPredicted RBP25.62■■□□□ 1.69
GTF2IP4-202ENST00000544802 RBM19Q9Y4C8 960 aaKnown RBP25.6■■□□□ 1.69
GTF2IP4-202ENST00000544802 TNIKQ9UKE5 1360 aa25.59■■□□□ 1.69
GTF2IP4-202ENST00000544802 FAM9BQ8IZU0 186 aa25.57■■□□□ 1.68
GTF2IP4-202ENST00000544802 ZNF326Q5BKZ1 582 aaKnown RBP25.49■■□□□ 1.67
GTF2IP4-202ENST00000544802 NPM2Q86SE8 214 aaKnown RBP25.49■■□□□ 1.67
GTF2IP4-202ENST00000544802 NACADO15069 1562 aa25.47■■□□□ 1.67
GTF2IP4-202ENST00000544802 WIZO95785 1651 aa25.46■■□□□ 1.67
GTF2IP4-202ENST00000544802 SALL2Q9Y467 1007 aaPredicted RBP25.43■■□□□ 1.66
GTF2IP4-202ENST00000544802 GOLGA3Q08378 1498 aa25.39■■□□□ 1.65
GTF2IP4-202ENST00000544802 RTN4Q9NQC3 1192 aaKnown RBP25.35■■□□□ 1.65
GTF2IP4-202ENST00000544802 CHIC2Q9UKJ5 165 aa25.34■■□□□ 1.65
GTF2IP4-202ENST00000544802 B4GALNT3Q6L9W6 998 aa25.34■■□□□ 1.65
GTF2IP4-202ENST00000544802 RTL5Q5HYW3 569 aaPredicted RBP25.33■■□□□ 1.65
GTF2IP4-202ENST00000544802 CLSPNQ9HAW4 1339 aa25.3■■□□□ 1.64
GTF2IP4-202ENST00000544802 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
GTF2IP4-202ENST00000544802 DHX57Q6P158 1386 aaKnown RBP25.21■■□□□ 1.63
GTF2IP4-202ENST00000544802 TONSLQ96HA7 1378 aa25.2■■□□□ 1.62
GTF2IP4-202ENST00000544802 MRS2Q9HD23 443 aa25.14■■□□□ 1.62
GTF2IP4-202ENST00000544802 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
GTF2IP4-202ENST00000544802 VPS8Q8N3P4 1428 aa25.1■■□□□ 1.61
GTF2IP4-202ENST00000544802 RRP7BPQ9NSQ0 103 aa25.09■■□□□ 1.61
GTF2IP4-202ENST00000544802 DEKP35659 375 aaKnown RBP25.06■■□□□ 1.6
GTF2IP4-202ENST00000544802 RAPGEF2Q9Y4G8 1499 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms